Array 1 12364-12514 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKNU01000026.1 Streptomyces albidoflavus strain CR46 Scaffold11_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12364 29 96.6 32 .C........................... GGCTCGGAGAAGGACAGCTCGGAGAAGTCCTC 12425 29 100.0 32 ............................. TACGGCCTCTCCGTCGCCCATGTGACGGCGGC 12486 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 97.7 32 CTGCTCCCCGCGCGTGCGGGGTTGGTCCC # Left flank : CGATGAGCCTGCTCCGAGCGATGGACATGCCGCTCTCGCCGCGCGAGGTGCGGGTGCTGAGCAGGGCCGCGCAGGGGGACTCGGTGGCGGAGATCGCCCGGGGGCTGTGCCTGTCGCACGGGACTGTGCGGAACTACATCGCTTCGGCTACGCGGAAGGTGGGGGCGAGGAATCGGGTGGATGCGATTCGGATCAGCCGGGCGGCGGGGTGGGTTTGAGGGGGTGGGGTTGAGGCGGCTGGTGGGGGGCTTGGGTGGTACGGGGGTGGGGTTGGGACTTGGCGGGTGGGGTGGGGGGTTGGGTCGGGTGAGGCTGAGGAGTGGGGTCGGGGTGTGAGTGGCTGGAAGGGAGGGGTTCGCGGGAGATCTGAGGGGTTCAATGGGGGGCGGGTGCTGGGTGGACACCATGGAGGGGATATGGGGCATTCGCCTGCATTGTCAGAATCTTTGAAGCTTGCAGGAGAGAGTGACTGGGCTGGGTGAAACCCCAGGTCAGCGAGA # Right flank : CCTCCCGGCAGCCGCCGCTCCCCGCCCACGCCTAGGTCGACGCGGTGCTCCGGCTCCCCGCCGCCGAAGGCTCCCCCAGCCCTGCCGCCAGTTCCCCGTACAAGGCCGACTCCCGAAGTAGCGAGGCGTGGGTCCCCAGGTATGGGGTCGCCCCGTCCAAGAGCAGGACGCGTTGCCCAGGTTCAGGCGCCGGAAAGTGGTGGCTCACCGTGATGACCGTGGCCGGGTGGGAAGCGAAGGCCAGCTCGGTCGCAGCCCGTGCACCTGCGTCCAGGTGGGCCGTGGGTTCGTCCAGAAGCAGCAATGGCGTAGGTGTCAGCCAAGCCCGGGCCAAAGCGATGCGGCGGCGTTCGGACGGGGTGAGGTGGTCCGGGCGGAGGGGGCGGGCGGGGTCAGCGGCGAGGGGGGCCAGGGTGAAGGTGTCGATGGCTTCCGTGATGCGAGGGGCCGGGGCGTTCGGGGCTAGGTAGGTGAGGTTGTCGTGGAGAGGGGCCTCGAAG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 30932-31691 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKNU01000030.1 Streptomyces albidoflavus strain CR46 Scaffold12_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30932 28 96.4 33 ..................A......... ACCGCTTGCGGCCGTTCGGCAGGTACTCGCCGC 30993 28 100.0 33 ............................ GTTCTTGATCCCCTCCAGCGCCCGGGTGAAGAT 31054 28 100.0 33 ............................ GACCCAGGCGTTCGGCCTGTGGGCCGAGGAGGT 31115 28 100.0 33 ............................ ATCGTTCCGGCTACGAGTTCGGACTTCTTCATC 31176 28 100.0 33 ............................ GCCGGTGTGCCTGGAGCCGAGCGACGAGGCATG 31237 28 100.0 33 ............................ GATCGCCGTGCTCATCCCGGTCGCCATGGAGGT 31298 28 100.0 33 ............................ GCCAGCGGCATGGACACCTCCATGCTTCAGGGG 31359 28 100.0 33 ............................ GGCGTTGCAGGTGTTCGACGAGCTTCAGGGCAC 31420 28 100.0 33 ............................ GCCGAGAACGGCGGCGCCTATGCCGTCGGAGGC 31481 28 100.0 33 ............................ GCGGCTGGACACGGTCTCCGCCCAGATCGCGCA 31542 28 100.0 33 ............................ GGCGTAGGTGACGGGGCCGGGCTTGGGTCCGGG 31603 28 100.0 33 ............................ GCTGGTGTAGAGACTCAGGGGAAGAACGTTGCG 31664 28 92.9 0 ........................G.T. | ========== ====== ====== ====== ============================ ================================= ================== 13 28 99.2 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : CGACACCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTGAAAGCCGAACGGCCCGAGGAGCTTTTCACCGCCATCAGGGCTGCGGCTTCGGGGCGTACGGCGTTGTCGCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCGCGGCCCGAGCTGACGCCGAGGGAGCGGGACATTTTGCGGCACTTGACGCAGGGGTTGGGCAACCGGGAGATCGCCAGGGCGTTGTTCATCAGCGAGGCTACGGTGAAGACCCATTTGGGGCGGATTTACCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGAGGCGGTTGTTGGGGTGAGGGGTGGGTGGCGGGGATGGGTTCGTGGATCGGGGGGTGGGGTGGGTGGGGGTGCGTAGGTTGGGGGTTGAGAGAGGGGGTGGTGATGAGTAAAGGGATAGCAAAGGCCGCCTGAAGGTGCAGGTGGGGAAGG # Right flank : CGCCATGGACCTAGTCCAGCGCGTTGCGCCTCACCTCACCGCCCGCACCATCACCGTCAGCTGAGGCGAGGCCGGCGAAGGCTGGCTGGTACCGATGTCCTCATACCCCCACGAGCGGTACAGGGCATGCACCTTCCCGTCTCCTGCCGATGAGTTGACCATCAGAGTCACGTACCGGTCGTCGCTGGCGGCGAGGAGTTCGTCGTGGATGCGGCGTGCGGTACCTGTCCCGCGCCAAGCGGGTCGTACGCCGATCTCCTTGAGGGCGAGCGTCGGCTGCGCGGTGTACTCGTCGCCAGGGGCCGGGGTGGTGCGCTGCCAATACCGGTCGCCGTGCTCGATGCGGTTGGCGTACGCGTAGCCGACCGGCTTGCCCTCGGAGTAGGCGAGCACGGCGACGAAGCCGGGTTCGCGGCCGTGCCGGTCCAGGCGCTCGCCAAAGACGAGCGTCGTGTAATTCGGGAGGTGCAGGAGCGGGGCTCGCACCTCCGCGTAGACCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //