Array 1 27809-31621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKZK010000015.1 Vibrio aestuarianus strain 15/061_1T1 NODE_15_length_60288_cov_42.362112, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 27809 28 100.0 32 ............................ AACAATGAAACCCACATCTTGTGGGCTTAATA 27869 28 100.0 32 ............................ TATTTGTCGGCGAAGAATTAGCGGACGTAACA 27929 28 100.0 32 ............................ CATGAGTGAAATATTTCCTTTTCCACTTGCCA 27989 28 100.0 32 ............................ TTTGTTTATCAGCAACGTTTAATCCGTCATCG 28049 28 100.0 32 ............................ AAACAACGGGCAATATCCCCCTCTTGAGGGTT 28109 28 100.0 32 ............................ TATTTAAATCAGCGTATGCAGTGGAGGAAAGA 28169 28 100.0 32 ............................ GTTAGTGCTCCTAGCTTTGCAGGTGGTTGGGT 28229 28 100.0 32 ............................ ACGATCTTAGTTCAAAGAAATAGTGATGATTG 28289 28 100.0 32 ............................ ATAATTAAGCGCAGTACCGAGAAAGCGAACGC 28349 28 100.0 32 ............................ TGAGACAACCCAAGATATGTTCGCAACCACTT 28409 28 100.0 32 ............................ ATTAAAGGCTCCAAGGTTAAGCGATTGAAGTA 28469 28 100.0 32 ............................ TACCCTCTCATGATGAGTTTGAAATCCTAGCA 28529 28 100.0 32 ............................ TTCACCGTTAACTCTGTGCCACTCATTGTGGC 28589 28 100.0 32 ............................ CTGTAGTGTCTTATCTGGAGCGCCCACAGCAA 28649 28 100.0 32 ............................ AGTAGCAGTAAATTTCGCTCCAGTTAAATTCA 28709 28 100.0 32 ............................ GCCCACATCACAAATTATTTTGCATGCAGTTT 28769 28 100.0 32 ............................ GCAAACGCCAGAAAAGCTAAATGTATCATCAA 28829 28 100.0 32 ............................ GAATCAGCCAAGTTTTTACCAAGCTAGACATA 28889 28 100.0 32 ............................ AACAACCCTAGAGTTGTCGTTCATTTCGATAT 28949 28 100.0 32 ............................ TCTTGGGTATTTTGCTAACTTGCCGTTTATCT 29009 28 100.0 32 ............................ TCGGAAAGTGCGCGAGTTAAATCATTTTGCGC 29069 28 100.0 32 ............................ AGGCGTCCCAACTAAAAGCGCTATGTAAGTCA 29129 28 100.0 32 ............................ TCCCAAGGTGTTAGGTCGTACATTGATTTGTT 29189 28 100.0 32 ............................ ATCAAGCGCGCAAAACGCTATCATTAATGTTG 29249 28 100.0 32 ............................ GTCTCACGGTTTTTCAGTTGTACGGTGGGATA 29309 28 100.0 32 ............................ CCTTGGTACTGGATCAATGAACCGTTTTTTAA 29369 28 100.0 32 ............................ TCTGGTTGTTATTGCAGAATATCACTAACTCA 29429 28 100.0 32 ............................ TTAACTTCAGGGCTATCGATAGTGTGGTAAGT 29489 28 100.0 32 ............................ AATGAGGAATACCGTCCCTCTTGGGTATTTTG 29549 28 100.0 32 ............................ ATAGCTAGATGAAGCAATCCCATGTAGCTAAT 29609 28 100.0 32 ............................ GATGGCGAGCAGTCCGGCTTAGATTTGGGCGA 29669 28 100.0 32 ............................ TAGAGCCGGGTGATTTATCCGATTCAGTCCAT 29729 28 100.0 32 ............................ ACGAATCACCAAGCAAAGGACTTTGCATTTCT 29789 28 100.0 32 ............................ ACTCCACCTGTCAGCATGGCTAGATTATCAGC 29849 28 100.0 32 ............................ AAAATCAAAATCCAAGTCACGAAAAAAGAAAC 29909 28 100.0 32 ............................ ATCGTAATTTGCCTAATTAAAACGCTGGAGTC 29969 28 100.0 32 ............................ TGATAGCAGTAAATACGGAATTTCTGTATACC 30029 28 100.0 32 ............................ AATACCAGAACCGATAAAAGAAGAGGTGCAAA 30089 28 100.0 32 ............................ TCGTTAATTTTACTCATGTCAATGAAGGTCAT 30149 28 100.0 32 ............................ GATCTGGTAACTGGATTTAAAAATTGCGAGAA 30209 28 100.0 33 ............................ AACGTTAACAGTATCTATGTAATTGAAGTTTGT 30270 28 100.0 32 ............................ TTAAACGATATTGTATCACTTACACCCCTGCG 30330 28 100.0 32 ............................ TGATGAGTTTTTGCTTGTCATTTCATGATTTA 30390 28 100.0 33 ............................ TGCCGATGGATCAATCCATTCACTTGGCATGTT 30451 28 100.0 32 ............................ GAACTCGGAATTAAGTATTGATTTGGCATTGA 30511 28 100.0 32 ............................ GGATGCAGCGAGCTACCTGGGGTGTGGCCCGA 30571 28 100.0 32 ............................ CTCACCAATGAAGACACAGTATAAACCATCAA 30631 28 100.0 34 ............................ CCAACGAGAGCGGTATAACCGCCGCCAGTATAAT 30693 28 100.0 32 ............................ TTTGAGGCTTTGTATACACATTCACACGCTGT 30753 28 100.0 32 ............................ ACATGTCAGCAGATGACATAATCATCGCTGAA 30813 28 100.0 32 ............................ AATCGATCCATCTTGCGAATGAACGATATGGA 30873 28 100.0 32 ............................ TGGCTAGTTTTGTGATGCCGCAATCTCTTCCA 30933 28 100.0 32 ............................ GAGCTTTGATAACTGTCGATATAGAAGCGAGA 30993 28 100.0 33 ............................ GCTAATAGAGCAACATTTCTTTTTATGTTTTTC 31054 28 100.0 32 ............................ AGACGGGTAGGTGCGAAGGGCAGTGTCTAGCG 31114 28 100.0 32 ............................ AGCGGTTCCTTTTTCGTCTGTAACAAAAACCT 31174 28 100.0 32 ............................ TTCCAGCATCCAGATCTTATCCTTCGCATTTT 31234 28 100.0 32 ............................ AGCAAAAACTCGCCGCGCTCCGATGGCTTGTA 31294 28 100.0 32 ............................ ATAAACCGAAGAGACTTAAGAGACGTAGCCAA 31354 28 100.0 32 ............................ TTTAGCGATTCGAGATACTTGTCAATCTCCGA 31414 28 100.0 32 ............................ CGTCAGATGTTGCGTAGATTGCGTAATCAACG 31474 28 100.0 33 ............................ ATCCCGCGAGGGTCTTTGCATTTTGGGCGAAAG 31535 28 100.0 32 ............................ GTCTAGTGCGAACATAGCAGCTCCTCGAAAAA 31595 27 82.1 0 ...........T.T.........-T..C | ========== ====== ====== ====== ============================ ================================== ================== 64 28 99.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTAACTTACGTTAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCACTATGGGCAGCAAAATCCGACAAACCGCTGGAGGAATGCTTGGCGGCTTTGCAACAAAGCAAACCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTTCCGCTGTTTATTCAGATGGAGCAGCAAAAGACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAGTCCATGTTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGAGTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : CTCAGGAAGCTCATCAGTACTGATAGACTTCATGTTGGTAACCGTAGGTTTCAAGAATGCAGAATTGATTTTAGCTAAAGGATTATATTCGATGAGTCCTTTTGTTCTGCGCAAAACTCATAATTTCATTTACACGTTGGCAAATTCTTTTTAGTGTTTCTAGATGGCCTTTTGCTTGAAGAGGTTGAAGTGTGTTGATAACTAATGGTGCTGTTAGCTCGGTAATAGGAGTATTTCCGAGCTTTGGTAGTAGGTGGAGATTTAAAGCTCTTTTAAGATTCATAAGAGTCTTTTCACTGATGGCTGCGCTTTTTACCGTTAACCAACTGTTTGTAACTTCATCTAATGTGGATAGTAAGCGCTGTTGCTCTATCGTTTGTTGGTTCTTGAGTTTGACTTGAGGATCAATGCCAGCTTGTAGCGTTTCTATCGCGCCTAGAGCCTTCTTTCGTGCATTTGTTAGGGAAAGGCTAGGGTAACTGCCAAACGTCATGTTAGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //