Array 1 18220-17053 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXQN01000010.1 Enterobacter hormaechei strain WCHEH090003 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 18219 28 100.0 32 ............................ ACACTGTAGGATCGTCTGCTGATACGCTAATA 18159 28 100.0 32 ............................ TTAAACGCCGCGTCAGGCTTGTCGATTGCCTC 18099 28 100.0 32 ............................ AGATTTCGTTCAGCTCTGGGTAGTTCACCATC 18039 28 100.0 32 ............................ TCGCGCATTGATTGGCGATGCGTGAGCGGAAA 17979 28 100.0 32 ............................ TTTGCAGCTGAAAGCCAGCGCAACCGGGCCGC 17919 28 100.0 32 ............................ CGTTTGCCCTGGCTTATGCCGGGGCTTTTTTT 17859 28 100.0 32 ............................ TGATAAAATCGCGGTGGCCGATGCCGTTGTGA 17799 28 100.0 32 ............................ CGGCGCAGTAAACGAAGATGCGGCTATGGCGC 17739 28 100.0 32 ............................ TTTCGAAAATGCTAATAAAACGGCGAGCTGGC 17679 28 100.0 32 ............................ TTCCTTGCCGAGCTTGTTAAGCGCATCCATCG 17619 28 100.0 32 ............................ CACGTCTGCCGGGCGATACCCGCTTGTACCGT 17559 28 100.0 32 ............................ TTGTTCCGCAAGCGTGTCGATCTTGCTCTTCA 17499 28 100.0 32 ............................ ACGCCGCGGACCTTATTTGCGATCACTTCAAC 17439 28 100.0 32 ............................ CTGCCGGATGGATAACGAGAAGGGATTCTGGT 17379 28 100.0 32 ............................ TGACGACCTGAACCGGCTGACAGAGCGGGCAG 17319 28 100.0 32 ............................ GCAGGTACGGCACGGACTTCAAGCGCCACCAC 17259 28 100.0 32 ............................ TGTTTGTCGATGTTGTTCATTGGGCGGCTCCT 17199 28 100.0 32 ............................ AGTCTGTTAACTTCTGCCAGTCCCCGCCGCTG 17139 28 100.0 32 ............................ TCATCGAGTGTGAGGCTGTGTGATTTTATTGT 17079 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 20 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCATAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCAAAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCAGAGTGAAGTCATTTGTCATGGTTAAGTATAGTCATTTGTCATGAGATAGGGAACGGGTGTTTTTTTGTTCAGGGTGGGATAAAAGAAGGATGGTATTTGACCCTAATTTTTGACCAAAATGTAATATATTGATTTTTCGCTTAAAGATCCGGGGGAGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGGAAGGTAATATTACA # Right flank : GCCGAAACTAAACCCAACCAACCGTTCAAATAATCGACTGTCCTGAAAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 29549-28081 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXQN01000010.1 Enterobacter hormaechei strain WCHEH090003 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 29548 28 100.0 32 ............................ GGGTGCATTGTTCGTAGTGGTTTCATTGTCCA 29488 28 100.0 32 ............................ AGAGGAAACGGTCGCGCCGTCAATCCACCCCT 29428 28 100.0 32 ............................ AGATGAATCATACGACGGATAGTTGGTTCCGC 29368 28 100.0 32 ............................ AGCTTACGGAATCGTGGCGGATAACATCACTT 29308 28 100.0 32 ............................ GCGCGACTTCGCATAGAGTGCGCCAGGCGAAT 29248 28 100.0 32 ............................ AAGCCACTCAACGGCTTCTTTCGTGTGGTCGT 29188 28 100.0 32 ............................ TGGTGAGTAGTGCGTCCTGCTGATGGCTTAAA 29128 28 100.0 32 ............................ GCTGACGCAGAACCGTATTACCAGCGACAGCG 29068 28 100.0 32 ............................ TATCGCCGATAGTAGACGGGGCGCTGGCGTTC 29008 28 100.0 32 ............................ AGCGATGGGACAGCGGCTAAAAGTGTGATCAC 28948 28 100.0 32 ............................ CTCATCTGGCCCAGCATACGGCGGGCGATACG 28888 28 100.0 32 ............................ TACATCCTGACGCATCCATTCCCTTGCAGCTT 28828 28 100.0 32 ............................ CTGACTGGCTGCCGCTGGCGCAGGAGGGCAAA 28768 28 100.0 32 ............................ TGCCCCACGCCGGCAATTACGTCTGCCGCCGG 28708 28 100.0 32 ............................ TTCGGGCAGCAGAATGTCGGCATCGTCTGCCG 28648 28 100.0 32 ............................ GACAACTCAGGAACACGCGCGGGCTCAAGAAG 28588 28 100.0 32 ............................ GTTCCGCAGCTTAAGAAAGTCAGCACGAAAGT 28528 28 100.0 32 ............................ GTGCGGCTTTCGCTTCGCCGTCTTTGGTTTCC 28468 28 100.0 32 ............................ CAAGGGCCAGCTGCGGCCATCGGGCTGAGCCT 28408 28 100.0 32 ............................ AGAAAAATTGCGCTGGACTATTTGGGGATCCG 28348 28 100.0 32 ............................ ACGAAAGCTGGATGCGATGCCGGTACTCGTCG 28288 28 100.0 32 ............................ TAACTCCTGGACTTTGCGCACAAAACGCCGCG 28228 28 96.4 32 ........................A... ATAACGATTACACCGGGAACGGCGTTACGACA 28168 28 100.0 32 ............................ CGCACTTCAGCCAGGAAGGCATCGGTGGCGGG 28108 28 78.6 0 .....................AC.CCCC | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCGCAAACGCAGCCCATTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGTGTGACTTTCAGGTGGTTGAATTTGACGATGAGGCGGAACGGCCAAAAGGAAAAGAATGGCTTCTGGAAGATACCGAAACCAAGTGCGATTACTGCCAGGCATTAAACCACGTGCTGCGGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACCGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGCAATTCATATCATTAATTGACCAGTGGTGTAGCGCGTCGGGGGAGGGACTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGAATTGTTTCA # Right flank : CCAAACATTCATCCCAGCTATTTAAAAACCATAATCATCACCACAATCCTCGTTGTATTTTAAATAAACAAAATATTCATTCACCCGACAACCATATTTTCTCATATATATTATTCATAAAAATAATACATTAAATACGGCAGAGTTTTTTCATTTCGACATTACGGTATTTATTATTCATTTGATACACGTCACATTTGTCTTCGTCTTATCTCCGATAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGTGAACAGCATTACCCCGTCCGACTTAAAAACCATTCTTCATTCAAAACGAGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTCAATGGGGGCCGTGTTGAATATGTCACTCAGGAAGGTAAGGAGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCACTCATGTTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAATTTGCGCGAGCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 45083-44814 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXQN01000010.1 Enterobacter hormaechei strain WCHEH090003 10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 45082 28 100.0 32 ............................ GTAATCCAAAAAGCGGCGACATGTAGTCACGA 45022 28 100.0 33 ............................ CTGCTGAATATCAGTGTTTCCTGCAATCATCAC 44961 28 100.0 32 ............................ ATATTTGCCACTGTTTCAGGCTGCTTTCCTTC 44901 28 100.0 32 ............................ TCTATCAATTACCACGCTCGAAATACGAGGAG 44841 28 71.4 0 ............A.......TAGGCTC. | ========== ====== ====== ====== ============================ ================================= ================== 5 28 94.3 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : GTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCATCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTGACTGTATTGCCTGCACAATACCCCTCAATTAAAAGTGGTTTTCCTGCGCGCGTATTCAGCATGATCTGGTTATCGACTGGATGAAAACAGATTTTATTTCAACGGATTATGTGTTTTTTGAACGCTATTAATGAAAAGCTATAGCACGACGATTTTGGCAAACTCTTTTTACCCCTTGCCTTCGGCGGGCTGATGCTGGCGTTTTCAGGGGCAGGGCGGTTTGCGCGGGGAAAGGCCCGGCGGGGAAGAGAGAGTTGGATGCTGGAATGCAGGAAGGGGACCGCGGACCCTTTTTTATTGGTGGATTTTAAGTGGTTGATTTTATTGTACTAGATGGTAAGTGGTAAAAAAGGGTTTTTGAGAGATTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCTG # Right flank : ACGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGTGCCTACAGGGGTTCGAAAGGCAATTGAGCTGGCCTGCACGGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAAATGAGCTGGCCTGCACGGGCAAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAATTGAGCTGGCCTGCACAGATAAAAAAGCCCGGTAGCGCTCACGCTTACCGGGCCTGCGGAAGAACAGCGACAGTTTATGCCAGAACAAGATCGCCCTGTGGATGGCATGAACACGCCAGCACATAACCCTCTGCAATTTCGGCGTCGGTCAGCGTCATGGTGCTGGTGACCGTATATTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCACGACAGGCCGCCACCACCGGTACGTTGTTGCTTTCCAGCGCTT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //