Array 1 2656877-2656560 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKIX01000003.1 Acinetobacter sp. FDAARGOS_515 tig00000001_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 2656876 26 100.0 34 .......................... TATCGCAAAGGAGATGCATCAAGTAAGTATTGGT 2656816 26 100.0 34 .......................... TTCCCATTGCGCCCCTGCAATAGAATAGAAACGT 2656756 26 100.0 25 .......................... GCCTGATGATGAAGCAGGTTTTGGT Deletion [2656706] 2656705 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 2656645 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 2656585 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 6 26 95.5 32 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCACTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAAAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATACTTTAACTTGTTTTTAAAGCATAATATCAAATTATTAAAATAACTTATTGTTATTAAATTATTTATTAATAAGAGTTTATAGT # Right flank : CGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAAAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAACCCCTTTCATTTTGCCTATGCGAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAAGGTAGAACTCGAAAAAGCCTATCGTTTACTTAATCATGGCCCTACTGTACTGGT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3448433-3445404 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKIX01000003.1 Acinetobacter sp. FDAARGOS_515 tig00000001_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3448432 28 100.0 32 ............................ TCAAAGATAGAATCTGACAAATAAGCAATTTG 3448372 28 100.0 32 ............................ CAGCGATTTAATAAATAAACTGCTGCGTACTT 3448312 28 100.0 32 ............................ AAACTTTAATGCTAAAGGAGCGAGTTGTTCCT 3448252 28 100.0 32 ............................ TGACCGTTTACACGCTCAGGGTTTAGCCTTCG 3448192 28 100.0 32 ............................ AACCGCATCTACAACTGGAATACCTGCATTAA 3448132 28 100.0 32 ............................ ACGATCAACCAATATCACACGACCACTAGCTG 3448072 28 100.0 32 ............................ TTTATAATATCATTTTGGTTAGTACCACCCGA 3448012 28 100.0 32 ............................ TAATGGTGAGCGTTGCCAAGCAACACTAGCTC 3447952 28 100.0 32 ............................ ATGTAGCCGATGGAAATGCTGTATGAAATGAT 3447892 28 100.0 32 ............................ ATAAGACATCCATTCAGTATCCTCCAAGTGAT 3447832 28 100.0 32 ............................ ATAAATGGAAAGACTCGAAAAATGTTGAACGC 3447772 28 100.0 32 ............................ TCATATCGGTTCACACACTGGATGAATTGCTA 3447712 28 100.0 32 ............................ ACACAAAAGAGCAAATTATTAACGCTTTAAAT 3447652 28 100.0 32 ............................ CAAGGCTTATCAACAGGACTACACAAAATAAA 3447592 28 100.0 32 ............................ ACCAGGAGGACGCAAAAAAACCGACTGGAACG 3447532 28 100.0 32 ............................ TGTTAAATCGACCAAGTCAGGTCTCATTCGTA 3447472 28 100.0 32 ............................ ATTTGCCAAAATTCTCCATTTGTAGGTATTGC 3447412 28 100.0 32 ............................ AAACAAGTCAGGAAAATAAAATGACATTACAT 3447352 28 100.0 32 ............................ AGAATCGTGACCGTTTCCGCGGGCGTTTTTCA 3447292 28 100.0 32 ............................ ATCACGTACGAACTGCACACCGCGAAGTGAAG 3447232 28 100.0 32 ............................ AGTAACGGTTTAAACGCTGAAACAGTATTCAA 3447172 28 100.0 32 ............................ AGACGCATTACTTGTAACACCAGATGAGTTAA 3447112 28 100.0 32 ............................ GCTAAAAACACGGTAATTGACAACATTAGGGG 3447052 28 96.4 32 ........T................... TCAATGAGTGAAAGTGATGCTTGATCAAATTG 3446992 28 100.0 32 ............................ CAATTTTCTGGTCAAGATGCGAATGCTGTATG 3446932 28 100.0 32 ............................ TTAACATGCGTTTAACGATGACAACTCCAAAC 3446872 28 100.0 32 ............................ ATCACTGGTGATATCCACCAGAGAAGCATCAA 3446812 28 100.0 32 ............................ CGATGCAAAACACAATAAACGCTCGTATTTAA 3446752 28 100.0 32 ............................ AGTAGCATAGCCTTCTGCCATACACACAATTT 3446692 28 100.0 32 ............................ AAGAGATTCATGCCGATGGTTTTAAGCCATAT 3446632 28 100.0 32 ............................ ATGTGTAGGAACTTCGCTAGTTCTACACCACC 3446572 28 100.0 32 ............................ TGTTTGCCCTGTCACTACACGATCAAGGGTAA 3446512 28 100.0 32 ............................ GTATCGGAAAATGGGAGTGTGACATGCATAAC 3446452 28 100.0 32 ............................ GGGCGCAAGAATAATGGGGTAGTTCATGAAGC 3446392 28 100.0 32 ............................ TGTAGCATCGCCAGAAATTGAACCATCGGTCG 3446332 28 100.0 32 ............................ TAGCCCCAGATAACTCCGTGCTGTATTGATCC 3446272 28 96.4 32 A........................... CAGGACTCATTACCTGCTTATGATATTCTGGA 3446212 28 100.0 32 ............................ ACGACGACCAGCCAATTCCATGTGAACAGTCT 3446152 28 100.0 32 ............................ CATTTAATTGGGCCACGCTGAAACTGATACAG 3446092 28 96.4 32 ....................C....... CGGTACATGTTTGGCGTGTACATATGATTAAC 3446032 28 96.4 32 ....................C....... GTCAGAACGTGTAGAACCGATAAAACAATTGC 3445972 28 96.4 32 ....................C....... TGCTTAAAGTTCCACTTAAAAACATTATTTTG 3445912 28 96.4 32 ....................C....... CATTAAAAAACCCGCCGAAGCGGGTTTGTGTT 3445852 28 96.4 32 ....................C....... AGTTTCGATTCCAGCGATCGACACTGTTTTGC 3445792 28 100.0 32 ............................ AAGTGGAGTGGTTAAAGTAGATGCTGTTTTTG 3445732 28 100.0 32 ............................ TTCAAATGTTGCTTCACTATCAACCCAAAAAC 3445672 28 100.0 33 ............................ GATTACAAAAAAGCAAGCCGCGGAATATCTTCA 3445611 28 100.0 32 ............................ GCGCATTCATTTGCAGCAGGTCTACGGATTAA 3445551 28 100.0 32 ............................ AAACAATTCAAGCAAATGCAGCAGTTTAATCC 3445491 28 100.0 32 ............................ TTTGGGTGATATGTTGTGGCATATACTGAAAG 3445431 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 51 28 99.5 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGAAGAGCTTAAATCACGCTACAAGGGTGCAGAAATTTACTTGATACGCAATGAACTGGACTATTGGTTGTTTAGTCCTAAAGATGGTCGAAGGTTCAGCCCTGACTATATGCTGATCATTAATGATGCTGAAAATGGCGAAATGTACTATCAATGCCTAATTGAGCCTAAAGGCGGTCATTTACTTGAAAAGGATGCTTGGAAAGAGGAAGTATTGATAAGTTTGGACGATGAAAGCCAAATTGTTTTTGACGCAGAACAAGATGATTCAAAAAACTATGTTGAGTTCTTAAATGAAGTCAAATCGCATGGTTATAAAGAGGTCAAGTGTTTAGGCTTTAAATTCTACAATACAGAACCACGCACTGAATCAGAGTTTGCCATTGATTTCCAAACAAGAATGCCGAGTTAATCTCGGCTTTTTCTAAATGTAAGCAATTGATTATTATATCTTTGTGCGGTTGCTACATAATATCGTAAATACGCTTCATGTCTACCAT # Right flank : TGCAAACGATGTGTAAAAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3457550-3455062 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKIX01000003.1 Acinetobacter sp. FDAARGOS_515 tig00000001_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3457549 28 100.0 32 ............................ ACCCATAGAAAGAATTGGCACATCCTCAGATT 3457489 28 100.0 32 ............................ AGTCCATCATCAACCAAGTTCTTCACTTGGGC 3457429 28 100.0 32 ............................ GATCAACTGGAACATGCTTAACTTCACGAATG 3457369 28 100.0 32 ............................ ATGTAGCAATCTTTGCTACATCCACCTTATCA 3457309 28 100.0 32 ............................ ATGCGCTGAGAACGTGCCAACGGCGATACAAA 3457249 28 100.0 32 ............................ TGCAAGTCAATAGCAACTTGTGTGTAATGATC 3457189 28 100.0 32 ............................ AATGGTTAATGAAAATAAAATCACGGCGGCGT 3457129 28 100.0 32 ............................ TGGCACTTGTGTTTTTCGAGTAGCCATAAAAA 3457069 28 100.0 32 ............................ ATTAACATCTGCATGACCATAATTCTCTAAGC 3457009 28 100.0 32 ............................ AATGCAGCTTTAGACAATGAAGCCGCAATTCA 3456949 28 100.0 32 ............................ AATGGAAGGAAAAATATTGGGATGAAAATCGC 3456889 28 100.0 32 ............................ GCCCTTAGACTCAACAATCTCAACAGACTCAA 3456829 28 100.0 32 ............................ AGAACGCAATGCCAAGCCAAAACACCGATCTA 3456769 28 100.0 32 ............................ GAACGGCTCAACAGATATTCAATCATTACTTC 3456709 28 100.0 32 ............................ ATGCGCTGTGCCACGTTTGCGCCGCTTACCCA 3456649 28 100.0 32 ............................ TTTTCCGCCGCTGCTGCTGCATCGGCTTCTGG 3456589 28 100.0 32 ............................ TTGAGTCGGACGTTGATGAATCCCACGAAAAT 3456529 28 100.0 32 ............................ GTGGACGATTCCAGATGCGGGGGTTCGTACTG 3456469 28 100.0 32 ............................ TAGAAAATCAAAAGGTGCGGGGCAGATCAATA 3456409 28 100.0 32 ............................ GTATGGGTGTATTCAATGATTAGTGGGTGCGT 3456349 28 100.0 32 ............................ ATCTCTACTTACTTCAATTATTCCATCGATTA 3456289 28 100.0 32 ............................ TCAGCCATTACACTTAGATAAATGGAACGGCA 3456229 28 100.0 32 ............................ ATAAAACCACAAATTTATAAATCATTTTATGA 3456169 28 100.0 32 ............................ TCATCTCAAGAAGACATTGATGCTTCTTATTT 3456109 28 100.0 32 ............................ AATGCGAATGCTGCGGGTTCAGGCATTGATGT 3456049 28 100.0 32 ............................ GTAGTTGAGAAAAACGGAAAAACTTCACTTGC 3455989 28 100.0 32 ............................ TTGAATGGGTAGAAATGCCCACTGTGTTACCG 3455929 28 100.0 32 ............................ ATCAACTTAACTTCCGTGATCTGATCGTCATC 3455869 28 100.0 32 ............................ TTAGTGATTGCATGTACCAAGCCAAAAAAGGC 3455809 28 100.0 32 ............................ AATTAGTCAAATATTCAGTTGAAGCTCAAGAT 3455749 28 100.0 32 ............................ TAAACACGTTTATAACTTGTATAAATCCACCA 3455689 28 100.0 32 ............................ AGACTATCGCAGTAGCAACATATCCAAAAATA 3455629 28 100.0 32 ............................ AGAACCTGGAGTCGCTGACAGAAAGTTAATCA 3455569 28 100.0 32 ............................ TTGATGTGACTTACTCGGCACGTTTTAGAAAT 3455509 28 100.0 32 ............................ TAAGTTATTTAGCATGATTGATCTTGGTGCTG 3455449 28 100.0 32 ............................ ATGGGTGATGAAGCGAAAAAGATTGATGACGA 3455389 28 100.0 32 ............................ TCCACATAACACATCTTGCACATATCAATGGG 3455329 28 100.0 32 ............................ ATTTAATAAAACATCTGTTGCTATACTTTCTG 3455269 28 100.0 32 ............................ CATTCTTTTTACGAATAGTTTTTAATTCATCT 3455209 28 100.0 32 ............................ ATGCGCCATTGAGAAGCGTTAGGGCCTTGAAG 3455149 28 100.0 32 ............................ AAGAAGAAGATCGACTGGTTTATTTGAGTAGA 3455089 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 42 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTCGCAAGGCTGCAAGATTATGTACATGTCTTATCCGCCCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAGGCACAGGAACACTTTAAAGCATTAGATCTAACGGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAGCTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACGGTACCTGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : GAATAACCCTAAATACGCGCTATTATGTAGCAACAGCACAATAAATAGAGTGATTCGCCATTTAAAATAATTCCTTTACACATAAGGAAAGGGATTATGGCTGAATCACATATCGTATCAGGATTAACTAAAAAACGTGCGGAATTGCTTGGTCAAATTGAAGCACATCAAAAAGAAATTCAACGTATCTCTGAAATGCTACTGCATGTAGATCACACTATTAAGTTATTTTCACCTGAATTTGATCTAAGAAGCGTTAAATCTAAGCGTACAAATCAAAGAAACCCTTATTTTGGAAGAGGTGAACTACAGTCATTAGTCTTAACTTGCTTGCGTGAAGCAAAAGAGCCAATGAACTACAAAGATTTAATGATGAAAGTTTTGGACATTAAAGGCATAGATTCATCTGTAGGCAATGATATTTCACCTAGCTTCATCAAAGTGCTGAACCGATTAAGAGATAAAGGTATTATTATAGCCCATAGCAATCATCGTCCTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //