Array 1 724844-722630 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCZX010000001.1 Streptococcus salivarius strain P468301 KS_34_NODE_1_length_1027293_cov_433.338_ID_467, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 724843 36 91.7 36 ......T......TC..................... TAAACAGCAACAACAATAAGTCCAATAATCATACCG 724771 36 100.0 35 .................................... CCCAAGCTGATTTTGTTGTTTGTGTTTGTCATTGT 724700 36 97.2 39 .............A...................... AATCCTCTTCTGAAATAGTGACGATTTCGTCCTTATCAG 724625 36 100.0 39 .................................... TGCTTGATCTTGAGTAAGGTTGTTAACTGTATTACCAGG 724550 36 100.0 39 .................................... TGACCGCCTGTGATAGACCAATCATTTAAGAGACCAGCC 724475 36 100.0 35 .................................... GGGAACGAGCGCTGATCTAACGCTTGATAAGAGTT 724404 36 97.2 38 .............G...................... GCTGCGTCACGGTCCTTCTTCATTTGCTTGAGAATTTC 724330 36 97.2 37 .........T.......................... TGTTTCCACACTGACAGTATTGTTCTTTCTGTCCTCG 724257 36 97.2 34 .............T...................... ACCGGTTTTTTGAATGATATACGCTAATTCTTAG 724187 36 100.0 36 .................................... ACCTTCTTACTGTCCACAACGTTCTTGATAACAACT 724115 36 100.0 35 .................................... TTAACAAACGTCCCATTTATCATTTTCCCTTTCCG 724044 36 94.4 37 ...........T.T...................... CTTTCATGGCTTTGAAATTATCATTGGGATTTTTCCA 723971 36 86.1 37 ....A..C.....A.....T....A........... ACTCGTTATGTCACTCATATCACTTTCTCCTTTTTTA 723898 36 97.2 33 .............G...................... GAAAAATCTCTCTTGGACACGCCATACTACGAT 723829 36 97.2 34 ...............................A.... CATTTTTAATTTTTCAAAAAGTTAGTGGGGTTTG 723759 36 97.2 37 ......................A............. ATGCTTCTGGCATCTTTTGCATCATAAACCATAGCCG 723686 36 91.7 34 .............G...........A......T... TTTTAAGGTATAACCCATCCAAACCGCATAATCT 723616 36 94.4 40 .............GC..................... CATGCAACATTGAAATTACCAGTACCACCTGAATTGCTTT 723540 36 97.2 38 ..............C..................... TTGAATTGATCATAATAGACGTAGAATGGCATGTTCAA 723466 36 88.9 36 .......C.....A.......CA............. CCCCTCTCTGCTACCGTTCCCTAGCCTTGCTCAATT 723394 36 97.2 34 ................................T... TTTCCGTTTAACGTTACATTAATTAATTCGTTCA 723324 36 88.9 38 ...G......A..T.......C.............. TCTGGAATGCCCGGAATACCACCTTGAAACTCTGGCTT 723250 36 97.2 38 ................................T... ACTCTGTGGATAACTTTTTATCAAGGTAGGCTATAAAC 723176 36 94.4 38 .............A.......C.............. CGTCCAAATCGATTATCAATCTTCATCATTTTAGGTTG 723102 36 88.9 37 ..............C...CT...C............ CCAATCTCTCGGATTGTGACCATTTTTTCAGTCCGAG 723029 36 94.4 38 .....G.......A...................... TTAAAATTTTTTCGGTAATGCTTGTCAATCAATGCACT 722955 36 97.2 36 ................................T... GCGTAAAATGCAAGTCCATAGTTATTTTCTTCATCG 722883 36 91.7 38 .............TC.......C............. TGATTCTCAATCACATCATTCAAAATACGATACTGTTT 722809 36 97.2 35 .............A...................... TTAGCTGTAAGTTGCGCTTTAGTAAGTTTAGTTGT 722738 36 97.2 37 ....................A............... ATTTCGGTTTGTCCAATCGTAATAATTTTTGTCATTG 722665 36 80.6 0 ..............C...............TTTTTT | ========== ====== ====== ====== ==================================== ======================================== ================== 31 36 95.2 37 GATATAAACCTATCTACCTCGAGAGGGGACGGAAAC # Left flank : AGAGTTTGATTAGGGCTTTTAGAGAACTTGACCCTAGTCTGTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGCGAAGAAGAGCGTGAGTTTGCCAAACAAAAAACCATGTTTTGTCTGATTATTTATGATATCCGAAGTAACAAACGTAGACTTAAACTCTCCAAATTACTTGAGGGTTATGGCGTGAGAGTGCAAAAATCCTGTTTCGAGGTCGACCTGTCAAGAAATGACTATCAGTCTCTCCTTAAGGATATCGAGAGCTTCTACAAGGCCGATGAAGAAGACAGCATAATCGTGTATGTGACAACTAAAGAAGAGGTGACTAGTTTTAGCCCCTACCATAGTGCCGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTGAAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCTAGTATCTGTCTAGAGCACAAGATATGGG # Right flank : GAAAATTTTGAAAACAGTCTTGACACCGCTTCCAGAAAGTGATAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAGATTAGTATTTACTTTTAAAAGGGTCGACCATCCTGCACAAGATTTGGCTGTTAAATTTCATGGCTTCTTGATGGAGCAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAACCCCTATGCGACCAAGGTAATCCAAGGGAAAGATGACACGCAGTGGGTTGTGCATCTGCTCACAGATGACCTCGAGGATAAAGTTTTTATGACCTTATTACAGATTAAAGAGGTGTCCTTAAACGACCTGCCTAAGCTCAGTGTCGAAAAAGTTGAGATTCAGGAGTTGGGAGCCGATAAACTCTTAGAGATTTTCAATAGTGAGGACAATCAAACCTATTTTTCAATCATTTTTGAGA # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATCTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //