Array 1 76413-71625 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIOG01000004.1 Corynebacterium aurimucosum strain 332 NODE_4_length_228098_cov_130.769, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 76412 29 100.0 32 ............................. CGGGCCTTCATCGCATCAAACCTAGTCGTGGT 76351 29 96.6 32 ............................G GCGCCAAGTTGTATATCCAGACCGTTTCGTCA 76290 29 96.6 32 ............................G TAGTCATGTGTCTAATAATGCCCTTGACCTGC 76229 29 100.0 32 ............................. AAGTGCCGGCCGGTGGCTCGGTCCGCACGATG 76168 29 96.6 32 ............................G GCGACTGAGGCTGTGGCTAAGGCTGAAGCTGA 76107 29 96.6 32 ............................T GCGGCTAAAGGCGCCAAGTTGTATATCCAGAC 76046 29 100.0 32 ............................. ACGGTCTCGACCTGCTCGGCGACCGCGCCGGA 75985 29 96.6 32 ............................G GGAAAAGAACCGTGCCCAAAATAATTGATGCT 75924 29 96.6 32 ............................G GTCACCGGCACGGGGATATGGCGGGCGGCACG 75863 29 96.6 32 ............................G TGCCGGCCATGCTGTTAATACCAGCAAGACCG 75802 29 100.0 32 ............................. ACCATCATTGGAGTTCTCCGCGGTCTCGCCGG 75741 29 100.0 32 ............................. CTACCCGGGGTCTGCGGAGCTGATTTATGATT 75680 29 96.6 32 ............................G CTGGAGAATCAGCGCGACGCGCTGAAGTACCA 75619 29 100.0 32 ............................. GCCAGCATTGCCTGCAGTTTGAATTGGTCCCA 75558 29 100.0 32 ............................. GCGATGGCTAAGGCGGGCAAGCTCGACAAAGA 75497 29 100.0 32 ............................. CCACCCCGAGCTGAAACCCCAGTTTGCTACCG 75436 29 96.6 32 ............................T CAGACGAAGCCCCCGTCGGGGTAGTCATTGAG 75375 29 96.6 32 ............................G ACCACACATCCATGCTGGCGTCGCGGGGGCGA 75314 29 100.0 32 ............................. CATGCCGGGCAAACACCGTCTCAACCTGCTCG 75253 29 100.0 32 ............................. CCGCAGGATTTAGGTAACCCGTATTGGGCGAG 75192 29 100.0 32 ............................. GGTACAGGCACCCAACGATTTTCGGGGATACT 75131 29 100.0 32 ............................. AAATGGCTTTGAAGCTTGTTAGGTCTGGCCCG 75070 29 96.6 32 ............................G CCGCCCCACTAGCGGAGGAAGCAGCCGCTGAT 75009 29 100.0 32 ............................. GATCCACCTTGAACTCAACATTCGACAGACCA 74948 29 96.6 32 ............................G GCACCTACGTTATTGCTGCCCAGTCGGGAAAC 74887 29 96.6 32 ............................G GAATACTCACAGCCTGTCTCCCTATCTATTCT 74826 29 100.0 32 ............................. CCACGGCCACGCCCACAGGGCGGGCGGGGCGA 74765 29 96.6 32 ............................G TGTCAACCCGGTATTACATAATTATTCTTCCT 74704 29 96.6 32 ............................G CGCCGGTTTAAACCGGTGGACACCACTATCGA 74643 29 100.0 32 ............................. TTCACCGGTCGTGCCGCGACTGCGCGCAGACC 74582 29 100.0 32 ............................. AATCGCACGCCCCATAAGTCGGATCGTCATGG 74521 29 100.0 32 ............................. CATCATCGTCTCGACCATGGGCACCGCCGCGA 74460 29 96.6 32 ............................G TGGAGTGGTTCCAGTCGCCGGGCGGGTCGAAG 74399 29 100.0 32 ............................. TCGTTTGTGCAGGTGCGGAAGCTTCTGCCTGG 74338 29 100.0 32 ............................. CGCATCCAGGTTCATCTCCGCAACCTCAACGT 74277 29 96.6 32 ............................G GACCACGGCACCGGCCATCAAGATTGGACCAC 74216 29 100.0 32 ............................. TTCCATGACGCCCACCTCAAGGTGCGGTTGCA 74155 29 100.0 32 ............................. GCAAAACCCAACAATTCGCGAGGGTTATACGT 74094 29 100.0 32 ............................. CGGCGCGCTATCGCGATGGAAGCCCTGGGGCA 74033 29 96.6 32 ............................G GTACGCCCGAACGGTAGCGGTTTGATTACGAC 73972 29 100.0 32 ............................. CTCAACGACCGTGACTTAGCAAAGATTCTTGG 73911 29 96.6 32 ............................G GGTGGCGTGTCCGCGGTGCGCGAGCGGCTGAA 73850 29 96.6 32 ............................G AAGAAACTCGATTGTGGTGTCAACCGGCTTAA 73789 29 96.6 32 ............................G AGATGACTTTTGAGATTGGCGACACCGAGGAC 73728 29 100.0 32 ............................. CAACATTGGTGAACAGGCCGAAGATTTTGCCG 73667 29 100.0 32 ............................. CCACCCACGCAAAGCGCGGCCAGCTCGTCATC 73606 29 96.6 32 ............................G CAACCGGCCAAGAACACTGGAGGGAGTAGCGT 73545 29 96.6 32 .........A................... ACGGTCAGGCCAGCAACAACCGCCGTAATCGC 73484 29 100.0 32 ............................. TGCCAGCCTGCCTGCAGCAGCCCCTGGAACCA 73423 29 100.0 32 ............................. GTATATCGACTGATAAAGAGTACCTAACTGAT 73362 29 96.6 32 ............................T CCCCCACTTTCTCGACTCGTACGCTCGCTGTT 73301 29 100.0 32 ............................. TCGCACACGGTGATGACTGATGCTGAGGCTGA 73240 29 96.6 32 ............................G GAAAAGAACGATGGATCGCACGATGGCGCGAC 73179 29 100.0 32 ............................. TTTCGGGTAGACCCAGGGAAAATCGGGGTAGC 73118 29 96.6 32 ............................G AGAGAGGAGCACTCGTGGAGTGGTTGTTGCAG 73057 29 96.6 32 ............................T CCGACTGTGAAGGCGCAGGCGGATCTTAAGGC 72996 29 96.6 32 ............................G TCAGAAGCGCCTTCCTCATCATCCACCGCGTG 72935 29 100.0 32 ............................. TCGGCGGCTGAGAAGGCTGAGGCGGCTAGGCA 72874 29 100.0 32 ............................. AACTCCTGGAAGAGGCCGCACAAACCGGAAAG 72813 29 100.0 32 ............................. ACTTCCCACAGTTGCGCGACAAGTGCTTTGAG 72752 29 100.0 32 ............................. GAAATAGAAATGGTCTGCTTCTGGCGTGCACG 72691 29 96.6 32 ............................G GCGCGTGCTGAGGCTTTCCAGAAGGAGCTCAG 72630 29 100.0 32 ............................. TGGGGTGACTGCTCTGGTACCACGTCGGCGTT 72569 29 100.0 32 ............................. GCATCCGGTGCTCCTGAGCGTGTCCTTGACCC 72508 29 100.0 32 ............................. CAGGCCCTCGTCCGCGAAGGCAAGACCGTCGA 72447 29 100.0 32 ............................. ACCAACACCGACACAAGCACCGCATATGAATC 72386 29 100.0 32 ............................. GGCCCGACGCGCTTGTCTTTCGGCAAGGTGAA 72325 29 96.6 32 ............................G TACTCCCGCGCCAAAGTAAGACTGACCGCTAA 72264 29 100.0 32 ............................. AACGAATCTTTACACCCCGCGTGTGGCGCTTA 72203 29 96.6 32 ............................G TCCATCGTCGGCGCGATTGTGGATCTGATCCA 72142 29 100.0 33 ............................. CCCCACGTACCCAATGAATGCAGCCAACAAGAG 72080 29 100.0 32 ............................. GGCTGGAACACGTACTGGTCCACGAACTCCCA 72019 29 100.0 32 ............................. AAAAAGAGTATCCCGCTGGCGAACGAGGATGG 71958 29 96.6 32 ............................G GTTCGCGCCTGATGGGTCGACCCATACCAGGT 71897 29 100.0 32 ............................. GAGCCCGAGCCCGGCGGCTGGCATACCGTCAC 71836 29 96.6 32 ............................G GCCCACCATGAACAACTACGATTCCCACGATT 71775 29 100.0 32 ............................. CCGGCCGTGTCCGCCCCGCAGTGGCTCGGCCA 71714 29 96.6 32 ............................G GACAACTGGGTCGGGGGTGAGGCCAAACTCAG 71653 29 72.4 0 ............C.......A.AT.CGTG | ========== ====== ====== ====== ============================= ================================= ================== 79 29 98.2 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : AGTGAACTTGAGGTCATTGCTTCGGGAATGAATTGGGCTGAAGAGGAGACACTTTCGTGATCGTTCTCGTAGTAACAGCATGCCCCGCTGGATTACGGGGTGATCTGTCGAAATGGCTTATTGAACTCACACCGGGTGTATTTGTTGGCCGTCCTTCCGCAAGAATCCGTGATTTGTTGTGGGAGCGAACAGTCGAACTATGTAAAGACGGAAGAGCGTTATTGGTCTATTCGGCAGCCAATGAACAAGGCCTTGAGTTTAGAACGCATCGGCACCATTGGCAGCCAACAGATTTCGATGGAGTCACTCTTATGGTCCGCCCTTCTCCTGAACGCAAGACTGTGCAGAGCAGAACTGGTTGGTCGCGAGCGCGACAGATCCGTTCTGCCTATCGGAAGCAGAAAGGGAAATAGAAAGGACTGGGACACAACCTATTCCTTGTCTTTGCGAAGTTGTATGTAAACTGAGCCCAGGGCTCCTTAACTCGCTGTTCAACAAGG # Right flank : GTTCAGGAAACTATTCCTTTCGAAAAAGCAATTCCTTGCTCCTCATGCTTTTCAATGTTGGGGGTTCAATTTTCATGCTGCCTCTGTAGGCTTGCTTTCGGAACCGCAATACAGTCATCGAGTACCTCCTGTTGCGCTAGGGTCAGTATCTGTGATTCAGGACGTCGACCCGCTCATCCATTCCCTGTACCAGGTCTTTGACCTCATCGGTGTGGTACTCAACGGCATCATCGGTGGCACGATTGCGCGCCGCAGGAAATTCGACATCATTGGTTTCGTCTTTCTGGCGCTCTTTTCGGCGCTGGCGGGCGGCATGATTCGTGACATGCTGATCTCTCATGGCCCAGCAGCCGCTATCTCTGATCCGTGGTATCTCACTCTGGCATGCGTGGGTGCGCTCATTGCTTTCTTGATGGACCTCAAGGGCAAGGTCTGGGAGATCTTCCTTGAGCACGCGGATGCTGTCATCTTGGGTGTGTGGTGCACGACTGGCTGTGTGA # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.84, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //