Array 1 1111895-1119391 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP075903.1 Clostridium perfringens strain CPS 2a chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 1111895 29 100.0 35 ............................. CTCTAGGTACTAAAAGATGTTTTAAAAATTCTAAA 1111959 29 96.6 36 A............................ AGACCAACAGGTAAAAGCACATTTATATTCCCTGTA 1112024 29 100.0 36 ............................. ATACATAGCTAAGAAAAAGGAAATTGTAGAACAAAA 1112089 29 100.0 37 ............................. ATTAATAATTACATCAAAAAAGAAAAATATATCAATT 1112155 29 100.0 37 ............................. TAAGTAAAAACACTCTTTTATACTTTCTATTTGGATT 1112221 29 100.0 36 ............................. GCTTTAGCAATTCTTTTAAGATAAGATTCGCACTTA 1112286 29 100.0 36 ............................. TAAAAAATTCTGGTTTTGATAAGCAATTAAAATCAA 1112351 29 100.0 37 ............................. ACCCAATCTTTTTTTATTCTTTATAAGCTAATAAAAA 1112417 29 100.0 36 ............................. TTAGTTGCTCCTTCTGTAACGTTAAAAACACATCTA 1112482 29 100.0 35 ............................. GATAATGAATTAATAAAAGATTGGAAAACTAATGA 1112546 29 100.0 36 ............................. ACTAAAAAACTAAGTTCTCTAAAAACCTTATCAACC 1112611 29 100.0 37 ............................. AGAATAGTATATAAGTTCTTATAATAAATATTATGCC 1112677 29 100.0 37 ............................. GTGATAAATACTTCCTTATTTTCAAAATTCATGAAAA 1112743 29 100.0 37 ............................. CAACCTTTAGCGTTAGTATAAATTGTAGTTACATCTC 1112809 29 100.0 36 ............................. TTATTTGAATGGGGAATAACAGAAAATATGGCATTA 1112874 29 100.0 36 ............................. TACCTTAAAGTTTCTTCTCTATAAGGTATCTTTTTC 1112939 29 100.0 36 ............................. GTTGTTATTTGATGTATGAGAGAATTAAAATCATCT 1113004 29 100.0 37 ............................. TTGCATGTTCTTGAGGAACTTCAAAAAGAATTTCTTC 1113070 29 100.0 36 ............................. TTGTTTGTCCTACTTCATTTGCAGTTGCTAAAGATT 1113135 29 100.0 36 ............................. CAGAAAAAGTATTTAAAGGCAAAACTAATATGAAAT 1113200 29 100.0 38 ............................. CTAAATTCCTCATTCTTTAACCAGTTATAAATTGCCTG 1113267 29 100.0 36 ............................. TTATGGTATGCATGGTATAACTCTAAACTTAATAGA 1113332 29 100.0 37 ............................. GGAGAAGTATTCAGAATAGATTGGGTAGATTCAGACT 1113398 29 100.0 36 ............................. TTAAAGAATTATTGATATTTTCATCTGAAGAAGTGT 1113463 29 100.0 36 ............................. TAGTTCTTTTGCGCCAGGTCTATCTTTCATGGAATA 1113528 29 100.0 36 ............................. GCTTATATTTAGTTTTTCAGCAAGTTCTTTTTGTGT 1113593 29 100.0 36 ............................. AGCTATTATTTGCATTTGAACACCCCCCAAATTTTA 1113658 29 100.0 37 ............................. AAGCACAACGGAGCATTTAAAAACAAAATGGAGAGAG 1113724 29 100.0 37 ............................. TGCAAAATGAAAATAGATATAAAAAATCATTTTGGAG 1113790 29 100.0 37 ............................. TCTTTAGTAGCTTGTATAGTTTTACTAATAAGACCTT 1113856 29 100.0 36 ............................. TCTAGTATGTTAGAATCAATTTTAAGCGACTTTCTT 1113921 29 100.0 38 ............................. TTTCTTTAGTAACGGTTTTATATATAGCAGCTAAGAAA 1113988 29 100.0 36 ............................. GCTATTATAGTTGAAGTATGTTTTTGTGAAGCAACT 1114053 29 100.0 36 ............................. TTACAGAAACCTCCTTTGGCTAGAAGCTAATTGGGA 1114118 29 100.0 36 ............................. AATAAATCTTTTTTTAAATTTTCAGAAATAATTACT 1114183 29 100.0 36 ............................. AAGCAAAACATTAGTAAGAACCAAAACAAAAGGAAC 1114248 29 100.0 37 ............................. TTTAACAAAGCTGGATCTACATTAAACAGTTTACATA 1114314 29 100.0 37 ............................. CGGAGAGGGTACGAACCAAAAGGCTATGACATTTATA 1114380 29 100.0 37 ............................. GATAAATACGGTAGTCTTGTAAAAAACCAAATGCTTA 1114446 29 100.0 37 ............................. GAAATGAGTGAGAAGCAACAATTACAAAGATTAGATA 1114512 29 100.0 36 ............................. TATCAACAACATCTATAGTCACATAAGGTAAGTCAA 1114577 29 96.6 36 ...................T......... AATTGGGAAAAATGATTATATAGAAGCTTTCGCATC 1114642 29 100.0 36 ............................. TGTAAAGTTCTACTATGTTGCTCTACCTCTATGCAA 1114707 29 100.0 36 ............................. TTTTACCTTCCATAGCCTTAGTTACTTTGATTTTTT 1114772 29 100.0 37 ............................. TAGATAATATTCTTTTGTTCCTAGTTCTTCCCAAACC 1114838 29 100.0 36 ............................. ATTACAATTCACGGCGATAGAGGGCAATCAATCGGA 1114903 29 100.0 36 ............................. ATTATTTTACTTGCTGATGTTGAGGATATAATCAAT 1114968 29 100.0 36 ............................. ATAATTTAGAAGGAGAAATGGTGTTGTCCTATCAAG 1115033 29 100.0 37 ............................. CGTACAATGGTCAATTCATCATCTGATATTGGGTTTT 1115099 29 100.0 37 ............................. ATAAATAAGGTGCCTGGGTTTTTAATGCGTCAAAACC 1115165 29 100.0 37 ............................. GTCCCAAAAAGATTATCTTTGTTTGGAATTGAGTATA 1115231 29 100.0 36 ............................. TTCTATAACATTTATTGTTCCAGCACCTATGTCAAT 1115296 29 100.0 37 ............................. ATTCATCAATACAAAACTTTCTTTCTATTGCAATTTC 1115362 29 100.0 36 ............................. AATGTACTAACTTTCATTATTTTCACCTCATCAAAG 1115427 29 100.0 36 ............................. GCGTGGCAATACATAAAAGTCTTATCTCCCATATGA 1115492 29 100.0 36 ............................. TTTTCATATCTTCTATGAGAAAATTTCTTTCCTTTA 1115557 29 100.0 36 ............................. GTAGACAAGTCTTTAATGGGTAGTGAGATATATAAC 1115622 29 100.0 36 ............................. TTAAAAAAGAAATTAGCTATATTCTCCGCTGTCTTA 1115687 29 100.0 36 ............................. TTATCCCTTATATAAGCCTTACCTAGGGGGGACTAT 1115752 29 100.0 37 ............................. CTACAGGATCTGTAACAAAAGTAAATTCATCTCTAGT 1115818 29 100.0 37 ............................. ATTGGACTTGTAATAATAGGGTTAGTTGCTTTGATAG 1115884 29 100.0 37 ............................. CAAGAAGTAATGGAAGCAGTTGAAGATTATAAAATGG 1115950 29 100.0 36 ............................. AGTATGATAAAAAAGATTAGCTTTAATGATAGTAAT 1116015 29 100.0 37 ............................. GTCATAAATTTTTAAAATACATTTTTTATCATCTTCT 1116081 29 100.0 36 ............................. GTTAAAAAAGTAGAGTTCCAGGAAGCTATAGGTAAC 1116146 29 100.0 37 ............................. CTTTATAAAGGTGATGAAAACAAAGTTTTTGATGTTG 1116212 29 100.0 37 ............................. TATTCCATATCTTTATCATATTTTAAAAACTCAGTTT 1116278 29 100.0 37 ............................. CTAAAATATTATTCATTTCCTGCACCTGCTAATGCTA 1116344 29 100.0 37 ............................. TATCTAATTTATAATCTTCAACTGCTTCTGATATTTC 1116410 29 100.0 36 ............................. ATTTAGGGGAACTATTGATATGCAACAGGAAGCATC 1116475 29 100.0 38 ............................. ATTATTCTATTTGATCCTATTTCAGCAAGTTTTTGCTG 1116542 29 100.0 37 ............................. CCACTACTATTACCAGTAAAGTTTCCACCTTCTACAG 1116608 29 100.0 37 ............................. ATTACAAGATCGTATGCATAAAAGTAATTTATATTTG 1116674 29 100.0 36 ............................. ACTTGAGTACCATTAATAAGCATCTGATAATATTGA 1116739 29 100.0 36 ............................. CATCATATAGGATATGCTTTAAGTTATGTATTTATA 1116804 29 100.0 36 ............................. TTGTTTTACCTTGTTAAAAGAATCAGTTAAATAAGT 1116869 29 100.0 36 ............................. TGAAAATATATTATCCATGTTTGCAGAAAATGCACT 1116934 29 100.0 35 ............................. GAACAAGAACATATTCTATATAACCTTCCAAATTT 1116998 29 100.0 36 ............................. TTTGATTTTTTCTAATTTATTATGAATTTCCTCTTG 1117063 29 100.0 37 ............................. ATTGGAGATGCTATGGAAGAGGTTTTAAGAATCTTAA 1117129 29 100.0 37 ............................. AGAAAGCATTATCAACATGTTGGACAGCAATTAAGGG 1117195 29 100.0 36 ............................. TGACTTGGCACTTATAAAGAATTTTGAAAGACTTCC 1117260 29 100.0 36 ............................. CTAAATATAGAACCACAACTTGTACAACACAATTCT 1117325 29 100.0 37 ............................. TATGGTGAAGGGTTTGTATTATCATTTGAAGTTAAAG 1117391 29 100.0 37 ............................. ATCTGTGGTCAAATAGTAAGAGCAACTAAGGAAGTAA 1117457 29 100.0 36 ............................. GATAATGAAGATAATTTAATACCTGCTGGTTACACC 1117522 29 100.0 36 ............................. CAGATTCAGCAGGTTTATTTTCTTCTGGCTTTTCTT 1117587 29 100.0 38 ............................. AACTTAAAACAATATAATTTAGTATTAAGTGGTGGTGC 1117654 29 100.0 37 ............................. AAGCTTGAATTTAGGCTTTAACATGAATTCTTCTTGG 1117720 29 100.0 36 ............................. AAATATGTTTTAAATTGTTTTAAAAACAACAACATA 1117785 29 100.0 36 ............................. TACTCAGATACTTTAAAGAAGGGTTCTAAGTCTATG 1117850 29 100.0 36 ............................. CTACACTTATTATATTACTCTCTTATGGTATAAATG 1117915 29 100.0 37 ............................. ATGAAACAGAAAGAAATTTTAGAAATATTACATGTAG 1117981 29 100.0 36 ............................. ATTTCATAATTTTCATTTGCTAATCCAACAATCTCA 1118046 29 100.0 36 ............................. CTAATAATACGTTATATCTTAAATAAATTAATTAAG 1118111 29 100.0 36 ............................. GTAGACAAGACTTTAATGGGAAGTGAGATATATAAC 1118176 29 100.0 37 ............................. TTTTTATTAATCTTATATAATAACTTTTTGCCAATTT 1118242 29 100.0 37 ............................. TCATTTTAGATCAAGTACTAATCTTAGTTGCAAAAAA 1118308 29 100.0 36 ............................. ATGAAAGGAGTATTTTTATGTCAACATATCATTTTT 1118373 29 100.0 37 ............................. TTTTTATTAGTTTCGGCGTAACGTTCTGCATATAATT 1118439 29 100.0 37 ............................. TATTAGTAAATAAATCTCTTTCTATGTAATCCATAAT 1118505 29 100.0 36 ............................. TACTCATAGAAGTTTTTAAATTAGATAGCATTTTAG 1118570 29 100.0 38 ............................. AGGATATAAAAATAAGTTTGATGTTTTAAACGCTATAG 1118637 29 100.0 42 ............................. CCTCCAATTTATATAAAATACTTATTTTATAACTTCTTCAAC 1118708 29 100.0 36 ............................. CGAGTAGTTATATGGGAAAATGTTAAAAATGTTCTT 1118773 29 100.0 37 ............................. TTATTTAATCTTACATTATCAGTTGATTCTGTTAATA 1118839 29 100.0 37 ............................. TTAATAGCTAAACTTGGGGAAATAAAAACATAGCATT 1118905 29 100.0 36 ............................. TCAGGATTAGTACATACTCCTGCACCATTGAAGTCA 1118970 29 100.0 36 ............................. ACACTTTCTAATATGTCATTAGTTTCACACCCTGCA 1119035 29 100.0 37 ............................. TTACATGGAGGAATGTCTATAGGCGTAATAGAAAGAG 1119101 29 100.0 37 ............................. GGTGATAATTTTTTTATAGATGAATTTAAGTCTTTAG 1119167 29 96.6 37 ...................A......... TTGGTTGGTGTTGCTGAAGAAGAAGTTGTTTCTATTA 1119233 29 100.0 35 ............................. TTTACAGTTTCGTTTTAGGTGAGAGAGGTAACGGT 1119297 29 96.6 37 ...................A......... TCATCTGATAAAACTCTTAAAATAATATATTGATTAC 1119363 29 82.8 0 ............T.....T.GG......A | ========== ====== ====== ====== ============================= ========================================== ================== 115 29 99.7 37 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTTATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACATTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTAAAATTTGGG # Right flank : AAAATAAAAAAAGCATCTTAAAAAGATACCTTTAAACTTAGAATTTTTTGTTTCAATAGCAAGTGCACCTAATGCAGATATATTTCCAACAATGCTTTGGATTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTCATATTTAATACTTCCAATATATATGGTAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATGAGTAATTTAAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGCTATCTGTCCATTTTTACTTAATTATTAATATATACTTATTAAATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATCTAATAGCTCCCTTGAAATTTCTTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //