Array 1 1075-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014241.1 Bifidobacterium angulatum strain GT102 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1074 36 100.0 30 .................................... TCCTATACACGTACGGAATGCGAATCGTAG 1008 36 100.0 31 .................................... CACGGCGTACAGGCATTACCACGTGAGACAA 941 36 100.0 30 .................................... TCTGATTCATTCAGTCTGTTTGTTTGGTTT 875 36 100.0 30 .................................... TTTGGACTAATCAAGGCGGGCACATTCATC 809 36 100.0 30 .................................... GTCGGCCATCACTCACCCGAGTAGGCCGTA 743 36 100.0 30 .................................... CTCCTTCACTGGTTCCGGCGTGGATGCCAA 677 36 100.0 30 .................................... ACGCCACGGTGTCCAGCCAATGCTCGAAGT 611 36 100.0 30 .................................... CGTAAGCCCATCGAGGAAACCGGTAACGAA 545 36 100.0 30 .................................... GTGGTTAGGGGGCATGTGTATACGTTTATA 479 36 100.0 30 .................................... TGGCCGTGGCGTCCCTGGCTGCGGCGTGCC 413 36 100.0 30 .................................... CAAAACCGACAATTACGCCCTCAATCTCTA 347 36 100.0 30 .................................... TATCCTCCTAAAAACAGGGATACGGAACAA 281 36 100.0 30 .................................... CCTGCTGACCATTCAGCTTGGCGCATCGTA 215 36 100.0 30 .................................... AGCTGCAAGCGTCGGGAGTAAGGCAACGCA 149 36 100.0 30 .................................... ACAGCTCAGGCGCACCGGATGCCCCAAACC 83 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 100.0 30 GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Left flank : ATTGTGCTGATGCTGTTGATTATGATGCATTATTTCAGAAAGCGGCGATTAAGCGAATTCTTGATGAGTTTGACCCTGATAAATTAACGAGGATTCTGGCGCTTCAATCAGAATTGAAGACAATAATTCAGAATGAAATTTGGAATGATGATTTGCCTTTGACTATTTCATCTTCTTTGGATTTAAAATCTGCCGTAATGATGACTAAACCGCGTGTTGATCTAGGCTCTGTGGGGTCCCTTTTTGATAAAATTCAACTGGTAGTTAATACTGCTGGTGCTCTTGCCGAGAGCAAGATGCTCGTGATGCTTCATACAATTCAATATTGTGATAACGACCAATTAATGTATTTGCACAAAGACCTATTAAGACACCATATGCAGCTTCTTGACCTGGAACGCTGCAACGAGAAGATCACCCTGACAGGGGGAAGAAGCTATTATGTTGACGGAGATTATGTTCAATTTTCATGAACTGTTCAGCAATCTCCAAGACTATCG # Right flank : CTGACCTCATTACTGAGGAAACGGAGATTGTGTTTCAGATGTCTGTCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 2064620-2062797 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014241.1 Bifidobacterium angulatum strain GT102 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2064619 36 100.0 29 .................................... AGGCACCGCACCGTACTAGCCCGTCAAGG 2064554 36 100.0 31 .................................... ATCTCCTTTATGGAAAAGCCCCGCACGTGGG 2064487 36 97.2 31 T................................... TAAATTAATGACGTTAATATCCTGCATATTG 2064420 36 100.0 30 .................................... TCATGGGCGTTCGGCGTACACTGTGCATGA 2064354 36 100.0 30 .................................... TCACGACACAGGAAGATGTTCTGGTACTCA 2064288 36 100.0 30 .................................... GTTGTAATCATGGCTGATATCTACCGCACA 2064222 36 100.0 31 .................................... ACGACTCTTTGTGACCATACTTCGATGGAGG T [2064218] 2064154 36 97.2 30 T................................... TCACAAGGTGAAAGGTAAGAAGAATGCTGT 2064088 36 100.0 30 .................................... TTGCGTATAAGGATAATAAGCCGGATTGTG 2064022 36 100.0 30 .................................... CTCTCTTCTGATGATGAAGTTTTCTGAATA 2063956 36 100.0 30 .................................... GCAGGCCGTTGCGGACGAGGGCGACGTAGA 2063890 36 97.2 30 ..............C..................... CACGCGAAGCCAAGCGACCCGGTTGTGTCG 2063824 36 100.0 30 .................................... CGGCCTTGGCGGTCCTGTCGGCGATGTCCT T [2063794] 2063757 36 100.0 30 .................................... ACAACTCGACCTCCTGCACCGCCTAGCCGC 2063691 36 100.0 30 .................................... AAACGAACACCACGACCACGTGGACGTTCG 2063625 36 100.0 30 .................................... ACGCTATGGCTGGAGAAACAGCACGGCAAA 2063559 36 100.0 30 .................................... TCGGCCATCGGTTGACAGATGCACGGCGAT 2063493 36 100.0 30 .................................... CATGCGTTCCCGTTTGGTCGGACGTTCGAT 2063427 36 100.0 30 .................................... AAGGTTGCATTATGACTCAAGACGAACACG 2063361 36 100.0 30 .................................... GCATGGTACGGCCAAGATAGGCAACGAACA C [2063333] 2063294 36 100.0 30 .................................... GATTGGATTACGCAGACTCAAGGCCGATAT 2063228 36 100.0 30 .................................... CGCTCTACGACGTGCCAAAGGAAAAAGTCA 2063162 36 97.2 30 ..........C......................... GGAGCAGCCCGGATCAGTATGAGACGGATA 2063096 36 100.0 30 .................................... TGACTCGGATTCCCCAGCCGGTCAGGCCGA 2063030 36 94.4 30 ..........C.........T............... TTGCTGCCTGCGGGGATGAGGTGGAATCGT 2062964 36 97.2 30 ..........C......................... AAACGAGATCAGCCTAATCGCGCTCAACCA 2062898 36 94.4 30 ..........C..............G.......... CCTTGTCAGGGAATCCGTAGTGGTCTGTGC 2062832 36 86.1 0 ............................C...TATG | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 98.6 30 GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Left flank : CTGCTGCAGCGCGTACGTG # Right flank : GAGATGACACTCTTTTTGAAAATGGCTTAGATGCTGCAGTTTTCCTGGCTGTGCCTTCTGCAGGTAAGGAAAAATCATTATCTGTAGTTATATTCGCCGCTTAACTACATTTATCCGAATAAGTGTAACTAACGAGTGGCTTAAGCTACACTTATTGCGATAAGTGTAGCTAACAAGAATCAGAGCGACAGATAAAAGCTCTTGATTCTCCTCGTGGTTGCAGTGCATAGTAATTAAAGGCTCTACTACAAGCTGTTATTCAATGTGTTTAATGCTCCTGCGCTTATATACCACATCCCGGCCAGTCCAGCACAGCTATTGGTTTTTCCTGGGTATGCTTATTCCGGTTGTGTATTTATCGGGGAAGATAGCCCGTCTTGGGTTATCCAAAACTAGTGGGGGAAGAATAATGGATTTCTTTGTGTCGTTATGGAACGGGTTCATGGTGTGGCCGGCATCGTTTCGGTACCTGGTATTGGCTGTAATCGTTCTACTGTTTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //