Array 1 616927-617910 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040908.1 Empedobacter falsenii strain 1681-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================== ================== 616927 48 100.0 30 ................................................ TCAAGCTCAAACGAGATTGTTGTTCAATGT 617005 48 100.0 30 ................................................ CATACCTGCAAAAAAAGAACTTGATAAATG 617083 48 100.0 30 ................................................ GTTATAGGTGCTGGACTTACTTTTGTAGGT 617161 48 100.0 30 ................................................ TATAAAAGATATCATGGCGACATCCGACGA 617239 48 100.0 30 ................................................ CACAATTTGACGAATAATTTCATTAATAAA 617317 48 100.0 30 ................................................ TTGTCGGGTGGTCAATTAATGACTTATAAT 617395 48 100.0 30 ................................................ TTGATTAATAATAAATTTTATTTTTTTGCT 617473 48 100.0 30 ................................................ TATATGTCTGAACATTGGAAATTTCACTCT 617551 48 100.0 30 ................................................ ACTCCTAAGCCGTTTAACTGATCAGCAATA 617629 48 100.0 30 ................................................ TGACTTTGTAAACGTCGCTACCTCAGTTCT 617707 48 100.0 30 ................................................ CGCCCGGCAGGAAGGGCATGACCACCAGCC 617785 48 100.0 30 ................................................ TATACATTTGCTTATGTTGGAACGTATCCT 617863 48 100.0 0 ................................................ | ========== ====== ====== ====== ================================================ ============================== ================== 13 48 100.0 30 GTTGTAACTACTTACGTAAAATTACTAAAAGTGAAAGGAACTCACAAC # Left flank : CTTTATATAAGTGTATGATAGGGGAGCAACGTGTGATTCGTTTTCCTGAAATGACATGAGTTTTAGTCGTTATAATGCTTATCGTATTATGTGGGTTTTAGTTTTGTTTGATTTGCCAACGGAAACAAAAAAGCAAAGAAGTCAGGCTACTCGTTTTAGAAAAGAGTTGATAGATGATGGATTTACTATGTTTCAGTTTTCTATTTATTTGCGACATTGTCCAAGTAGAGAAAATGCAGAGGTACATATAAGACGAACAAAATCTAAATTACCTGAATTTGGTAAAGTTGGAATAATTTGTATTACTGATAAACAATTTGGACAAATGGAAATATTTTTTTCCAAAAAAGAAACCGATTTACCAACAGGTCCACAACAATTAGAATTATTTTAGGAATAAAAAAATCCGATAGAAAACTCAACTTCTATCGGATTTTACTTTTTTTCTCATATCTAAATTTCATCTCAAACCCTTTTATATAAAGGACTTTTAAAATGAG # Right flank : CATGAATACCTTCATCCAGTCCTGCTGAACTCGTTTCAGCATCACATTCTAAAATAATGTAAAAGAACAATTTTCTTTATAATAGTGATAACCTTTCTTAGGTAAATCTAGAATCGTAAATCTAAAAACCTTCTTTTTCTGTCAAAAATGCCAATCTAATCTACAAATCTTCTCCAATTTTTTATTTTTCACCGATCGTTTTTCTCTATTTCGTCTACCGTTTAGCGTAAACCGTCAAACATTTCAAAAAATATTTCTCATCATACCAGTAACTTAAGAGAAGAATGTAAAATAAATGTAAATTATGTTTGGAAAAGCGGAAAAAGGGTACGTATATTTGCAACCTCAATACGAAAGACGAGTAGTATTGAAATTGACATAGGGACTTATATAGCGATAAAATTTATTTGAAAATAAATTTGCGAGTTTAGAAATAAGTATTACCTTTGCAAACCAACTCCGAAAGGAGTTTGAGAGTGAAAGTAAATTTGACTTATTGA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTACTTACGTAAAATTACTAAAAGTGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.80,-2.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 1543510-1540854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040908.1 Empedobacter falsenii strain 1681-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================= ============================== ================== 1543509 49 100.0 30 ................................................. TAAAAACTATGCGATTTAAAACAAATTCAA 1543430 49 100.0 30 ................................................. CAAGGGGTTTCATTAGTTCGTTTTCTGTTA 1543351 49 100.0 30 ................................................. GATAACATCTCCTTTCAAAACCGCTTTAGA 1543272 49 100.0 30 ................................................. TTTCTCCTCCAACTTTTGAGTTATGACTTG 1543193 49 100.0 30 ................................................. CAAGGGGTTTCATTAGTTCGTTTTCTGTTA 1543114 49 100.0 30 ................................................. GATAACATCTCCTTTCAAAACCGCTTTAGA 1543035 49 100.0 30 ................................................. TTTCTCCTCCAACTTTTGAGTTATGACTTG 1542956 49 100.0 30 ................................................. TTCTTGTTCATTTAATATGTCATTGAAAGA 1542877 49 100.0 30 ................................................. TTCGACTGATTCCTGCCAACCAATTAAAGG 1542798 49 100.0 30 ................................................. TCGTTTCCAAAAGGTGTAGAACGCTCCCAC 1542719 49 100.0 30 ................................................. CTGCTTCAACGTCAGTTGATGTAATACGAG 1542640 49 100.0 30 ................................................. AACCCAACTCCCATTACCAGAGTTAATAAC 1542561 49 100.0 30 ................................................. CTCCTATTGGATTAATTTTAACTTCAACCA 1542482 49 100.0 30 ................................................. TACTTTTTTAAACGAATGCAAAGAAAATAA 1542403 49 100.0 30 ................................................. GATCTGCTTATTCGGGCATCTTCAAAAGGA 1542324 49 100.0 30 ................................................. TGAACTAATTCAATACTTTTAGTATCTTCT 1542245 49 100.0 30 ................................................. CATCTGCTTATTAAACCACTCCAACCAAAG 1542166 49 100.0 30 ................................................. TAAAAATCCACACGTAGAGATTGTTTCAGA 1542087 49 100.0 30 ................................................. AAAACGAATAACCATTACGTCAATAGGTTG 1542008 49 100.0 30 ................................................. AAATGATTTTTCGAAACGATTTAGTTTTTA 1541929 49 100.0 30 ................................................. TTACCATAAAGCAAAGGTGAGTAATATCTG 1541850 49 100.0 30 ................................................. TTTAGAATTTTTAAACGGAATAAAATAGCA 1541771 49 100.0 30 ................................................. AAAAAAACAAAAACGGATCGAGAATTTTTA 1541692 49 100.0 30 ................................................. AACGGAGACGGCGCAACGTTAACACCAGAC 1541613 49 100.0 30 ................................................. AACTTAGTGTGTTCACTTAACGGTGTAACA 1541534 49 100.0 30 ................................................. TTCTGCTAATCTTTCATAAGCAGTTTGTTG 1541455 49 100.0 30 ................................................. CAAAGAAGCTGTAAAACGATTTATTGAAGA 1541376 49 100.0 30 ................................................. AATCTCCGTAAGTCCAAATGATCCATTAGT 1541297 49 100.0 30 ................................................. CTCTCGCTTTGATACAATCCCCTCCACTCA 1541218 49 100.0 30 ................................................. CGCTCTATTCGTGTTTCGCTTAATATGCCA 1541139 49 100.0 30 ................................................. TAAGTCAAATTCAGCCTCTGCTGTTAATTG 1541060 49 100.0 30 ................................................. AATTTCTTGTGATACGTTGAACTCTTTTTC 1540981 49 100.0 30 ................................................. GAGAGGTAGCGAATGGAGTTGGTGTGCGTG 1540902 49 100.0 0 ................................................. | ========== ====== ====== ====== ================================================= ============================== ================== 34 49 100.0 30 GTTGTGAATTGATTTCAAATCTTGGTATATTTATCAAAGTATTTACAAC # Left flank : GACTTTTTGGTTACTTTTTAGTCAAGTAAAAAGTGACATTAAAAAAAGAAATTCGAATATTTAAAACAGAAAATCAATAAAAAAAGTAACATTCCCTCCCTATCCCTACTTCCTCTTATGATTTGTTTTATTTAAATGAAATACGTATCTTACTGAAATTAAGTAAATTAAAACGTATGCAAAACACTTACTTTTTTACACAAAAAGAGAAGGATAGCAACGAGTTAAAACTTCTTTTAGTAGAATTAATTACGAATATACAACCCACGGACAAAGATCACGGATTCTACGACAGTGCAGATGTAAAAAGGCTGCTTAACGTTAGTGACAAAACGTTGTATCGCATGAGGAGAAACAAGACGATTCCTTGTTTTAAGCTCGGTAAAAAGTACTTTTACCCAAAACATTTCTTTAACAAAAAAGCTCTTGGATAAGAGCTTTTTTAGTAATTTTACGTAAGTATTTACAACAGAAGTACACCAATCACGCTCTGAAATTGG # Right flank : CTCATTTAACAAACCATTATCATAAAGGGTTTGAGAAGAAATTTAGAAATGAGAAAAAAAGTAAAATCCGATAGAAGTTGAGTTTTCTATCGGATTTTTTTATTCCTAAAATAATTCTAATTGTTGTGGACCTGTTGGTAAATCGGTTTCTTTTTTGGAGAAAAATATTTCCATTTGTCCAAATTGTTTATCTGTAATACAAATAATTCCTACTTTCCCAAATTCAGGTAATTTAGATTTGGTTCGTTTTATATGTACCTCAGCATTTTCTCTACTTGGACAATGTCTCAAATAAATAGAAAACTGAAACATAGTAAATCCATCGTCAATCAACTCTTTTCTAAAGCGAGTTGCCTGACTTCTTTGCTTTTTTGTTTCTGTTGGCAAATCAAACAAAACTAAAACCCACATAATACGATAAGCATTATAACGACTAAAACTCATGTCATTTCAGGAAAACGAATCACACGCTGCTCCCCTGTCATACACTTATACAAAGA # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:-0.5, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGATTTCAAATCTTGGTATATTTATCAAAGTATTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.51%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //