Array 1 9806-10223 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 9806 30 100.0 34 .............................. TCACAACGGGATTTTTTGTGTTGCGCAGCTCCTG 9870 30 100.0 35 .............................. CTCCTTGCTATGGCCATAGCCTCCCTCGCCGACGA 9935 30 100.0 34 .............................. CGAGTGATGATGAGCATCTGCAACTTCGATAATT 9999 30 100.0 35 .............................. TTCTTCTCCACGTAGGCACGGCAGCGCACGACGGA 10064 30 100.0 34 .............................. ATAGGTATGCATTTCGAGTTCGTTTCGTTTCCTG 10128 30 100.0 36 .............................. TGCCTTTTATTGGTGGTAATGTCAATGTCAATTCTG 10194 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : CCTTTAAGATGTATTGGTAATTGTATGTATGTTATCCTGATTTATGATGTGGCAGAGAAGCGTGTTAGTAAAATGCTGAAATTGTGTCGGCAATATCTTTGTTGGATACAGAATTCTGTGTTTGAAGGCGAACTGTCAGAAGTTAAACTGCGGGAGTTGCAGTATAAGATAGGAAACTTAATTGATAAAAAAGAGGATAGTGTGATAATATTCTCTAATAAAAAGGGTTATCATATGAGTAAGGATATTCTTGGCAAGGAGCGAATGTCAACAGAGAACTTTCTGTAAAGTTGTCGATGTGTAGGAATAGGTGTCCTTTTAATTTTCCCGTAGATGCCCATATCGCTCTTTGACTTCTTGAAACACCTTATATAAAAGGAAATGTCGATGCTCTATGGAAAATATATCATTGGGCATCGACATTTTTTCAGTGATTTTTATTACCTTTGTATTGCTGAAAACATTAGTGTTTATTCGACTTATCTCTTTTAAAAGAGTGA # Right flank : TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTATAATTGAACCTTATTGGAATTGAAATTGAAAGGTGCGATACAATTATGATTATAACCTATGGTTATAATTGAACCTTATTGGAATTGAAATATGTTTATGGACCATTTCAGGAGCCTTAAGCAGGGTTATAATTGAACCTTATTGGAATTGAAATATATCTGAAGCAGCACATTTGAAAGCCCGACCTTGTTATAATTGAACCTTATTGGAATTGAAATCCAGGAACACCAGCAGCTGCAGGAGAAATCAACTGGTTATAATTGAACCTTATTGGAATTGAAATAGGAGATAAAGTCCCCATTGTCTCTCGATGTATTGAAGTTATAATTGAACCTTATTGGAATTGAAATAAGGGTTCAGTTGAGTTGTCGCAAGTTGAGAGGAATGTTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 10327-11007 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 10327 30 100.0 35 .............................. TGAAAGGTGCGATACAATTATGATTATAACCTATG 10392 30 100.0 34 .............................. ATGTTTATGGACCATTTCAGGAGCCTTAAGCAGG 10456 30 100.0 34 .............................. ATATCTGAAGCAGCACATTTGAAAGCCCGACCTT 10520 30 100.0 35 .............................. CCAGGAACACCAGCAGCTGCAGGAGAAATCAACTG 10585 30 100.0 37 .............................. AGGAGATAAAGTCCCCATTGTCTCTCGATGTATTGAA 10652 30 100.0 36 .............................. AAGGGTTCAGTTGAGTTGTCGCAAGTTGAGAGGAAT 10718 30 100.0 37 .............................. TGACAGAGTATCACACACGGATTGAACGCAAACCCTA 10785 30 100.0 34 .............................. ACGAGATTGTACATGACAACCAGGGCGGACATAA 10849 30 100.0 35 .............................. GAACATCTCGGCAACTGGGGTTCGATTCCCCTCCG 10914 30 100.0 34 .............................. TGCGTAGAGCGTGTAATTCCCCTCTCCGCCACCG 10978 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AATTGAAATTCACAACGGGATTTTTTGTGTTGCGCAGCTCCTGGTTATAATTGAACCTTATTGGAATTGAAATCTCCTTGCTATGGCCATAGCCTCCCTCGCCGACGAGTTATAATTGAACCTTATTGGAATTGAAATCGAGTGATGATGAGCATCTGCAACTTCGATAATTGTTATAATTGAACCTTATTGGAATTGAAATTTCTTCTCCACGTAGGCACGGCAGCGCACGACGGAGTTATAATTGAACCTTATTGGAATTGAAATATAGGTATGCATTTCGAGTTCGTTTCGTTTCCTGGTTATAATTGAACCTTATTGGAATTGAAATTGCCTTTTATTGGTGGTAATGTCAATGTCAATTCTGGTTATAATTGAACCTTATTGGAATTGAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCTTTCAGCTCAGCAGGGCAGCGACTTGGAGTTATAATTGAACCTTATTGGAATTGAAATTCGACGGTTTGATAGAGAGTGTGAACAAGTCAAAGGGTTATAATTGAACCTTATTGGAATTGAAATGAATTAATCTGTCCTAACATCATATAAGGGTTCAAGTTATAATTGAACCTTATTGGAATTGAAATTGCCGTGAAGCTGCGGGCGATAAAGCGTAAAAAGGTTATAATTGAACCTTATTGGAATTGAAATCTATGTTGACGGATTCCAGTGGAGCTTCCGCTATCGTTATAATTGAACCTTATTGGAATTGAAATGCTAAGGTTGCGCACCATCGCAGAGCTTCGATGAAGTTATAATTGAACCTTATTGGAATTGAAATTGNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 3 11141-11495 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 11141 30 100.0 36 .............................. TCGACGGTTTGATAGAGAGTGTGAACAAGTCAAAGG 11207 30 100.0 35 .............................. GAATTAATCTGTCCTAACATCATATAAGGGTTCAA 11272 30 100.0 34 .............................. TGCCGTGAAGCTGCGGGCGATAAAGCGTAAAAAG 11336 30 100.0 35 .............................. CTATGTTGACGGATTCCAGTGGAGCTTCCGCTATC 11401 30 100.0 35 .............................. GCTAAGGTTGCGCACCATCGCAGAGCTTCGATGAA 11466 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : GATGTATTGAAGTTATAATTGAACCTTATTGGAATTGAAATAAGGGTTCAGTTGAGTTGTCGCAAGTTGAGAGGAATGTTATAATTGAACCTTATTGGAATTGAAATTGACAGAGTATCACACACGGATTGAACGCAAACCCTAGTTATAATTGAACCTTATTGGAATTGAAATACGAGATTGTACATGACAACCAGGGCGGACATAAGTTATAATTGAACCTTATTGGAATTGAAATGAACATCTCGGCAACTGGGGTTCGATTCCCCTCCGGTTATAATTGAACCTTATTGGAATTGAAATTGCGTAGAGCGTGTAATTCCCCTCTCCGCCACCGGTTATAATTGAACCTTATTGGAATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCTTTCAGCTCAGCAGGGCAGCGACTTGGA # Right flank : TTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTATAATTGAACCTTATTGGAATTGAAATTGTAGGGACACAGGCCGAACAGAAGAAGTATATCGGGTTATAATTGAACCTTATTGGAATTGAAATGGAGCAGATAAGGAAACGCTTGTGGAGCAATATAGTTATAATTGAACCTTATTGGAATTGAAATGGAGCCTTTAACTGCTCATCCCAAGTCAAATGCATGTTATAATTGAACCTTATTGGAATTGAAATTAACATGACAACGAAAATTCAAGTAAACAGCTTGAGTTATAATTGAACCTTATTGGAATTGAAATAACAGTGGAACACCGTTTACACAGACAAACAGCCCGTTATAATTGAACCTTATTGGAATTGAAATAAAGTACAAAAAAGGGGCGAGAAACAAGAATGTTTGTTATA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [23.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 4 12775-12932 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================== ================== 12775 30 100.0 34 .............................. TGATTTCACTGTACTCGCTGTCGAACTTATCCTC 12839 30 100.0 34 .............................. AGCCGTGACAGCTGGAAGATACACGGATATGGGC 12903 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ================================== ================== 3 30 100.0 34 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : GAAATAAATTCAGAAACTTCTTGCCCTCGGACTTACACGCGTTATAATTGAACCTTATTGGAATTGAAATTCAAGAACCGAAACATTATGAGATGGCGCAAAAGTGTTATAATTGAACCTTATTGGAATTGAAATCAAGGTGAACCTTGAAGCCTACGCACGCCATCGCACGTTATAATTGAACCTTATTGGAATTGAAATTGTGGACGTGAAGTCCGCAGGAGTCGTTTACCTTTGTTATAATTGAACCTTATTGGAATTGAAATGAATAACAAACGGCTGGACGGAGTATCCTTCACGCTGTTATAATTGAACCTTATTGGAATTGAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTATAATTGAACCTTATTGGAATTGAAATATGGTCGGCGTGGTCGGTGTGATTGTAGCCTTCTA # Right flank : TTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTATAATTGAACCTTATTGGAATTGAAATTGCTTAACAAGACTATTAATCTCAGCCTCATTCTTGTTATAATTGAACCTTATTGGAATTGAAATAGAACAGCGTCCAACTCCTTACGGACAATATCCAGGTTATAATTGAACCTTATTGGAATTGAAATGGAACAAAAGAGTTCGCATCAACAACAGCAACACTGTTATAATTGAACCTTATTGGAATTGAAATTAACATTACGCAATTGAGCAGCCGAAACAACAGAATGTTATAATTGAACCTTATTGGAATTGAAATTTAGAAAATTATAATTAAAAATTTAGTATAAAACTGTTATAATTGAACCTTATTGGAATTGAAATATTCAATTTCATTCTCATAACCTCGAGAAACAATCGTTA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 5 13102-13457 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 13102 30 100.0 35 .............................. AGAACAGCGTCCAACTCCTTACGGACAATATCCAG 13167 30 100.0 35 .............................. GGAACAAAAGAGTTCGCATCAACAACAGCAACACT 13232 30 100.0 36 .............................. TAACATTACGCAATTGAGCAGCCGAAACAACAGAAT 13298 30 100.0 35 .............................. TTAGAAAATTATAATTAAAAATTTAGTATAAAACT 13363 30 100.0 35 .............................. ATTCAATTTCATTCTCATAACCTCGAGAAACAATC 13428 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : GAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTATAATTGAACCTTATTGGAATTGAAATATGGTCGGCGTGGTCGGTGTGATTGTAGCCTTCTAGTTATAATTGAACCTTATTGGAATTGAAATTGATTTCACTGTACTCGCTGTCGAACTTATCCTCGTTATAATTGAACCTTATTGGAATTGAAATAGCCGTGACAGCTGGAAGATACACGGATATGGGCGTTATAATTGAACCTTATTGGAATTGAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTTATAATTGAACCTTATTGGAATTGAAATTGCTTAACAAGACTATTAATCTCAGCCTCATTCTT # Right flank : TAAATGATGAGTATCTTTATAATACGCAGTTTGAAGGTTATAATTGAACCTTATTGGAATTGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATAATTGAACCTTATTGGAATTGAAATTATAGAGGGCATCGAAGATAAGGAACTATGGAAAGTTATAATTGAACCTTATTGGAATTGAAATGAATTGCTGCCAGCTCAATCTGTTGTCATCACTCAGTTATAATTGAACCTTATTGGAATTGAAATCTCAATCGCACACCCTCTAAAGTGTAGGTGTGTGGTTATAATTGAACCTTATTGGAATTGAAATCAAAAAAAGTGAAAGCTATTCATTGTCCCTATTCAGTTATAATTGAACCTTATTGGAATTGAAATACCTGTGACCTCGTAGTACAGTTCTTCGATAGTCTGTTATAATTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 6 13688-14370 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 13688 30 100.0 35 .............................. GAATTGCTGCCAGCTCAATCTGTTGTCATCACTCA 13753 30 100.0 34 .............................. CTCAATCGCACACCCTCTAAAGTGTAGGTGTGTG 13817 30 100.0 35 .............................. CAAAAAAAGTGAAAGCTATTCATTGTCCCTATTCA 13882 30 100.0 35 .............................. ACCTGTGACCTCGTAGTACAGTTCTTCGATAGTCT 13947 30 100.0 36 .............................. ATGATTGTGACAAAGGCAAAAGAGGAAGGGTTGACG 14013 30 100.0 36 .............................. AATGCGAGTGCAATAAGTCGCGTGTCGAGGTAGTTC 14079 30 100.0 35 .............................. CGACAGGCGAGAATCAGCTTGTAATGGTAATGGGT 14144 30 100.0 34 .............................. TTAAATATTCAGAATGCGACGATAGCTGCTTTAG 14208 30 100.0 36 .............................. CTGAATATTCAGAATGCGACGATAGCTGCTTTAGCA 14274 30 100.0 37 .............................. GGCTATTTAGGCAGGAAGAAAGGATCTGAACGCTTTA 14341 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 35 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AATTGAAATGGAACAAAAGAGTTCGCATCAACAACAGCAACACTGTTATAATTGAACCTTATTGGAATTGAAATTAACATTACGCAATTGAGCAGCCGAAACAACAGAATGTTATAATTGAACCTTATTGGAATTGAAATTTAGAAAATTATAATTAAAAATTTAGTATAAAACTGTTATAATTGAACCTTATTGGAATTGAAATATTCAATTTCATTCTCATAACCTCGAGAAACAATCGTTATAATTGAACCTTATTGGAATTGAAATAAATGATGAGTATCTTTATAATACGCAGTTTGAAGGTTATAATTGAACCTTATTGGAATTGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATAATTGAACCTTATTGGAATTGAAATTATAGAGGGCATCGAAGATAAGGAACTATGGAAA # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGTTATAATTGAACCTTATTGGAATTGAAATTTCGACAATGAGGTTTCTAAGTTCAAATCGAACTTGTTATAATTGAACCTTATTGGAATTGAAATCTGCGTTGATACCAGTCAAGCATAAAGGAACCTTTCTCGTTATAATTGAACCTTATTGGAATTGAAATTATACCCACTCGTTGTAGTAAGACTTTCCTCTAAGTTATAATTGAACCTTATTGGAATTGAAATAAATAGCCCGGAGATGTCTGCAGGTAGAACCTGAGTTATAATTGAACCTTATTGGAATTGAAATCCTTTATAATGACTATGTTGCACGCTGGGGCTACGTTATAATTGAACCTTATTGGAATTGAAATACATTATGCGGCTGTGGGTGGCTTCGGACGAAAGGTTATAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 7 15192-15682 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15192 30 100.0 35 .............................. CGCGAAATCGAGTGCATGTCGGATTGCAGCAACCG 15257 30 100.0 35 .............................. TTGTCAAGAAAGTAGCTGCGCTTGCTGTCATACCA 15322 30 100.0 37 .............................. TGGCAATACCGGCAGCAAGTGGGGCAAGAACCTGGTT 15389 30 100.0 35 .............................. CGTGCATAGGACCACGCAACCCTACAACGGCGAGT 15454 30 100.0 35 .............................. TCTATTTGTAAGTGGAAAATTTGTAAGACACCCTG 15519 30 100.0 37 .............................. CGCATAAATAGCCGTCATCATATTACACCCTATATCA 15586 30 100.0 37 .............................. CGACGTCGCTCATTGTCCACTTTCATTGTTTATAAAG 15653 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 36 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AATTGAAATAAATAGCCCGGAGATGTCTGCAGGTAGAACCTGAGTTATAATTGAACCTTATTGGAATTGAAATCCTTTATAATGACTATGTTGCACGCTGGGGCTACGTTATAATTGAACCTTATTGGAATTGAAATACATTATGCGGCTGTGGGTGGCTTCGGACGAAAGGTTATAATTGAACCTTATTGGAATTGAAATCATTTTGTGAGCATGTAAACCGTGTGCTCTGTATTTGTTATAATTGAACCTTATTGGAATTGAAATTTTATGCGCTTACGTTACAACGTAACGGGGTCGCGTTATAATTGAACCTTATTGGAATTGAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTATAATTGAACCTTATTGGAATTGAAATGAGAATTCTACTATTCATCATTTTGTCATGCGTCG # Right flank : TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATAATTGAACCTTATTGGAATTGAAATTGATTAAGTGCCTGCTGTCCACAGGCACACTTTGGTTATAATTGAACCTTATTGGAATTGAAATTAACTGCCCCAGCATCGTTTCGCTCATTTTGATAGGTTATAATTGAACCTTATTGGAATTGAAATAGGGCATGAATATCCACTTTTTCTCGCGCAGGTCGTTATAATTGAACCTTATTGGAATTGAAATGGGTATCAGCGTAACTATCAAGAAGGAGAAGAGAGTTATAATTGAACCTTATTGGAATTGAAATAATAGCCTGCACAGAGTGTAGCTACAAAAGACACGTTATAATTGAACCTTATTGGAATTGAAATCAGGAAAGGGGTGATATGTCTTTGTCTTATCTGATGTTATAATTGAAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 8 16566-16726 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV817574.1 Prevotella sp. HMSC077E09 Scaffold396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16566 30 96.7 36 N............................. TTCTTAGAAACGAAAGCAGCGGTGCACTGTTTCAAG 16632 30 100.0 35 .............................. TGTCGTAAAGTCTTTCCCACGTCTCATCGTCAACA 16697 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 97.8 36 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AAATAATAGCCTGCACAGAGTGTAGCTACAAAAGACACGTTATAATTGAACCTTATTGGAATTGAAATCAGGAAAGGGGTGATATGTCTTTGTCTTATCTGATGTTATAATTGAACCTTATTGGAATTGAAATCCCGATAATCTTAATTAATAACGCTTAAAAGTATGTATGTTATAATTGAACCTTATTGGAATTGAAATGCCTGCTGCTGTCCCTGTGGCATGGTCATCAACACAGTTATAATTGAACCTTATTGGAATTGAAATTGTTTAGAGATCTTTTACGGTGTTAAACATTTCACGTTATAATTGAACCTTATTGGAATTGAAATAAGTCAGAAGTTTAGAATAATGCTTACCCCCGACAGTTATAATTGAACCTTATTGGAATTGAAATTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CCGCAGATTGGTTCAAGTAGTGATTACGCGAACGATGTCATTATTGAACCGCATCGGATTTTGGGCGTAATAGACATTCGGGAGGTTATTTACCTGCCAAACATCTATTACCCCAGCCGGTTTATTCCCAATATTCCTTATCAGTCTTGATGTCAAGCCAACCGGGAATGCCATTTTTGGTGATGTGATAAAAAGAACGGGTGGTTTGTTTTATCTCGTCATAGACGGGGGCTTTGTCACGGGGGAAGATCCCTACTTTATTATCTTTGTAGAAATAAATCAGACCATCGGACTGCATGATGATAGAGTCGTTGTCTATTGGAAAGATTATTTTTCCCGTGACTTTAACGGTTGGGTAAATCTCTGTTTTCTCATCCCAATCATATACACGTTTGGTTATCAACTTCGGTTTCACATTCTTCGGCTGCTTATATTCATAGGCCACGATGCCGAATTTCCCTTTTCTGCCTACTCTTATCCATTCCGGGTGCATGTCAATC # Questionable array : NO Score: 8.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //