Array 1 3334796-3336684 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027002.1 [Ruminococcus] gnavus ATCC 29149 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 3334796 32 100.0 38 ................................ ATCATTTGCAATCAAATCACAGACGGAGCAGGCGGCAA 3334866 32 100.0 34 ................................ GATGTGTGGTTGAATCACGTTCGAGAACTGAGGG 3334932 32 100.0 34 ................................ CCCGGTGCCTTATCCTGTGAATCTACTCCATCAC 3334998 32 100.0 34 ................................ AAATCTGGCGATCTCGGATTATATGAATATCGAG 3335064 32 100.0 33 ................................ AAACCTATCATTATCCGTATTTCCTTTCGATTC 3335129 32 100.0 34 ................................ TTGCAGATGTTTTGCTCGTATCGTCCAGAAACAT 3335195 32 100.0 34 ................................ TATAAATCCGCCCAATTCTCCCTCTGCTACATCA 3335261 32 100.0 35 ................................ TTGTTGAATCTTTCTTGTCATTTGTTTCCTTATCT 3335328 32 100.0 33 ................................ CTGTCGATTATGAGCCGGGGATTGTCCAAAGAC 3335393 32 100.0 35 ................................ AGTGAATAATCATCATTTAACACAGTCTGGAACTC 3335460 32 100.0 35 ................................ AGAACTTAATCAAAAAGAAAGGAGTGATTGATACG 3335527 32 100.0 35 ................................ CTCATCGGTCAGAATAGAGTCATTGAACTTGCAAG 3335594 32 100.0 35 ................................ AAGGTGATGCAGGGGCTTACGTGGGATGAAGTGGC 3335661 32 100.0 35 ................................ ATTCCACGGTACAGCTTGTTTTTGAGTTTCGGAAG 3335728 32 100.0 37 ................................ CCCATCCCGTGTGTTTAGGGATCAGGTCGGGAAAAAC 3335797 32 100.0 33 ................................ GTCTTAGGTTGTTTAAGGTGTGTAACCATCCAC 3335862 32 100.0 33 ................................ CTCGGTATACTGCTGCCGATAGTCTCCATACAG 3335927 32 100.0 33 ................................ AGCATAACCTTCCAACTTTTCCTCTACGCCTGT 3335992 32 100.0 34 ................................ CCCCAACTGTAGCATGGCATATCCTTTCCAAAGT 3336058 32 100.0 34 ................................ GAAAGTACGGCACAAGAAATCCACTTGAGATTGT 3336124 32 100.0 34 ................................ CCAGAGTTTTTGATCTCCTGCGGATATTCTGGGC 3336190 32 100.0 35 ................................ TCAACATTCCATAGCTAAAATCAATACCATAGGCC 3336257 32 100.0 33 ................................ ATGGTTGTGAGTGATATCGTAGCTTACCGGAAC 3336322 32 100.0 33 ................................ AAGTTCCGGTTGCCAGAAGGGATGATCCTGACA 3336387 32 100.0 36 ................................ ATGTCACGTTCGATTGTGTATTCGAACGCATCCAAG 3336455 32 100.0 34 ................................ CAGTCCATAAGCGCAAGCTCCGGATACTCTTCCA 3336521 32 100.0 35 ................................ CAAACATACCAGTTGTACATAAATTACTATCACAA 3336588 32 100.0 33 ................................ CAGGCGGGACTTTCGGATAATTGGATCCATTAA 3336653 31 90.6 0 ........................-.G..T.. | T [3336681] ========== ====== ====== ====== ================================ ====================================== ================== 29 32 99.7 34 GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Left flank : ATCCGGTATTTCTCTGGAAATGAGGCGAAAATGGGATGTTAGTGTTGATTACATATGATGTGAACACAGAAACAGCGGCTGGAAAGAGGAGATTGCGCCAAGTGGCAAAACAGTGTGTAAATTATGGGAGAAGAGTGCAAAATTCTGTATTCGAATGTATCTTAGATAATGCACAGTGTGTTATGCTTAAGGCAAAACTGACAGATATCATCGATGAAGAAGTTGATAGTTTGAGATTTTATTACTTGGGAAATCAATATAAAACAAAAGTCGAACATGTTGGTGTAGACAGAGGAATTTCGGCGGATGGAATTCTTATTATGTAACTGGGGTGCGGATGATAAGCAAACATAAAAATGCTGGGAGATTCGCACCAAAAAAATGCACAAAAATTAGTTGAAGAGGTGAAAGTTAGAGAAATATGATGAGGAAAAGAGAATGATATTGGTAGAATTGAGTAATATTAAAGAATATAAAGCCTAAAATTAGGCAAAATTGCT # Right flank : TGTGGTGGACGGGCTGCCGGAAGATGCCGATGATTTCCGGTATCCGGGAGATGCGATCGAACCGGAAATACAATCGGAGTTGGAACGTGCATTAAGCGGGGAAACGGTATTGCCGGAGAAGATTCTGGATACAGACTGGGGAAATATTTTTATTGCTTATTATCCGTTGTATAATGAATCAGGAGAAGTCATCGGTGCACTTGGAATAGAAGTTGCGGCAGATATAGAAGCCGAGGCGGTACATGACAAATCCATTATACAGAGACATGGCAAATACTGATTTTATGACAGAACTAAAGAACAGAAATTCTTATGAGACAGACCGGCAGAACCTGGATGCAAAGAAGAAATGGAATGGCCTGACAGTGGCAGTGATCGATGTGAACAATCTGAAGCTGGTAAATGATCGGCTGGGGCATGCTGTGGGTGATGATTGTATTGTGAATGCAGCACGGGTCCTGCAGAGTGTTGAATCTCAAAAAGTTACGGCGTATCGATAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //