Array 1 1006-78 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRYW01000209.1 Psychrobacter sp. FME6 NODE_215_length_1100_cov_194.589, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1005 28 100.0 32 ............................ ATTGACCACAACCATTGTAAAAGCTAGCTCTA 945 28 100.0 32 ............................ CGTGACAGCGTTTGGGATGCTCATAGGCTAGA 885 28 100.0 32 ............................ TAGATGGTGCAAAAATAGAAAAAGTGTTCAAT 825 28 100.0 32 ............................ CAAGTGATACACCGATCGGAGACTACCCGCAT 765 28 100.0 32 ............................ TTATAAATACTGGCTTTCGATGTTATTTTTAA 705 28 100.0 32 ............................ CTCAAACGCTTCTATGACAATATGCCCGCCTG 645 28 100.0 32 ............................ TCCAGTTAACATCTTTTCTATGTAATTCTATA 585 28 100.0 32 ............................ ACAAAAAAACTGGATTTGGGCAGCGTGTCAAG 525 28 100.0 32 ............................ ACTTCAGTTAAGTCAGTAGATAGACCTTGTAA 465 28 100.0 32 ............................ AGTCTTCAGGCTTATCAGAGTTGACACGATCA 405 28 100.0 32 ............................ TTCTGCTTGAGCCATTTCAATCTACCTTAATG 345 28 100.0 32 ............................ GTCCAGCATCATTGCGGTTATCGCCAATTTTT 285 28 100.0 32 ............................ AATTACAATATAGCTTGGTTAGTCGCTTTATC 225 28 100.0 32 ............................ AGTTAGTGTCAGCGATAAATGCAATCAAAAAA 165 28 100.0 32 ............................ CCTTGTATAGCCTGTGGGCGTTCCCCACAGCT 105 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : ACGTTACTTTAATCAAAACCTCTTATCAGGTGTCCTAAATTAGTTGACCACTACACTTAGAAATGTGACTCTATGCCACCTGAGTAGTATATCA # Right flank : ACATGTAGATACTGTATTCCTATTGTAGTGGCATAATAAAATTGGACAGCTTCTAAGAGGTTATAATAACCCAAAGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 12653-13997 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRYW01000079.1 Psychrobacter sp. FME6 NODE_80_length_14047_cov_586.354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12653 28 100.0 32 ............................ ACGGACGCACGACCTACGGTAGGGCAAAACTG 12713 28 100.0 32 ............................ TCTGCAAGTGAATGTTCCTTCGTTCTTGTGAC 12773 28 100.0 32 ............................ ATGATAAGGGGTTACCACGTCCGCAAATTATC 12833 28 100.0 32 ............................ GAACCAAATACAAAAAAGCCTTGTCTTAGAGT 12893 28 100.0 32 ............................ AGTTGCACTACAAGACCTTGTAGACACCTTCA 12953 28 100.0 32 ............................ ACAAATGGACTGCACGCTGTACCACAAATCAT 13013 28 100.0 32 ............................ CTCCAGTTACAGTCTTTTCGATAAATGACGAT 13073 28 100.0 32 ............................ AGCCCCCGTTTTACCGAACATCAAAGTGTTAC 13133 28 100.0 32 ............................ ACACAGCCAGAGCCATAAAAAAATAATAAAGA 13193 28 100.0 30 ............................ CTAATTTGCAAGTCTAAAACATATATAAAA 13251 28 100.0 32 ............................ AGCTTGATTAGAAATAAGTACCGTGGTGAATT 13311 28 100.0 32 ............................ TTGCACGCTGTCATACAAATCATCAAAAAAAC 13371 28 100.0 32 ............................ AGTTGCATGGTGTGTGAACAAATAATTAGCCA 13431 28 100.0 32 ............................ TTTTAAGCTCCGCTTGGTGCTGCTGTTCAGCC 13491 28 100.0 32 ............................ GCTATTAGTCAATATATCATCACTGTTTTTAT 13551 28 100.0 32 ............................ ACGCTACAAAACCCCAAACTACTCCAAGAAGC 13611 28 100.0 32 ............................ TCAATGCTTTTTATTGTTGATAACAAGCCGCT 13671 28 100.0 31 ............................ CCACCAATAATGGCTATTAATTTAAAGTATT 13730 28 100.0 32 ............................ ATGCAACTGGTTGCAACCGACCTAAAGCCATA 13790 28 100.0 32 ............................ ATACGGCATAAGGGATTGCTTGTACCACAAAT 13850 28 100.0 32 ............................ AAAGCGGAAAAAACTAAAGCCAGACCAAAAAT 13910 28 100.0 32 ............................ ACGTTGTTGCGATTTACTCGAAGGCCGTCAGG 13970 28 89.3 0 .......................T.T.G | ========== ====== ====== ====== ============================ ================================ ================== 23 28 99.5 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATTAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCATAAAAACGTGCTTAAGCAAGCTGAAGCATTCGCTGAGCACAAAGGCATTACGCTGGAGGCGGCACTGATACACTGCGCCAAACACAAGCAGGATAACAAGCCCTATCCGTATATCAACTTAAGGAGCATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAACGAAACTCAAGGGTCGTTTAACAGCTATGGCATTAACAATGCGGCAGATAAGGTTACTGTTCCCCATTGGTAAGCCACTTATAAGGTAATGATGAATTACCCAAAAATTGGGACAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTGCAATAAAATCAATCAGTTACAACAGAGTGAAAAATGGAGGGTAAAATAGGGTATTTTGACCTCCACGCCTTGTTGTAACTAAATTTTTTGAGGTATAATTCCT # Right flank : TGGCATAATAAAATTGGACAGCTTCTAAGAGGTTATAATAACCCAAAGAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //