Array 1 872380-870509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLGY010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-045 tig00000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================== ================== 872379 26 100.0 40 .......................... AAAATACTTGGGGTAACATTTCAGCATGTGTTGTGTCTCG 872313 26 100.0 41 .......................... TCATTTTTAGCATTATAAAAACCTTTGATGTTTTCGTCTCG 872246 26 100.0 40 .......................... AGATATGCGAAAGATGTCTCAGATGTAACGATTGGTCTCG 872180 26 100.0 39 .......................... TAATTCTTGATGCGATACGTTCTCCATAATTTTGTCTCG 872115 26 100.0 40 .......................... TAAAAATAAAGGTTGATGAACGTTTTTCAAACCCGTCTCG 872049 26 100.0 39 .......................... TATGCCACTATTAGGATTAGGGATCTCAACAATGTCTCG 871984 26 100.0 41 .......................... TAATTCGTAGTTAAAAGGGCGTCTAATGATGTCTTGTCTCG 871917 26 100.0 40 .......................... TTTGGCTGCTAGCTTAACAATCTCATCAGCTAATGTCTCG 871851 26 100.0 39 .......................... CTCGCACAAATACCACGTACTAGTGAATTTGGAGTCTCG 871786 26 100.0 40 .......................... TTAAGTATTAAGCTTCTGTTTTTGAAAAAGTCATGTCTCG 871720 26 100.0 39 .......................... AGGAAAATATTGAGGTGATGTAAAGTGAAATATGTCTCG 871655 26 100.0 40 .......................... AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAGTCTCG 871589 26 100.0 39 .......................... GTCTTTGCGCTGTAACTCTGATATTTTATCTTTGTCTCG 871524 26 100.0 41 .......................... TGTAATTCGACGAGACCAGGCACCCGAAGTTTATAGTCTCG 871457 26 100.0 40 .......................... TTTTTTAGCAGCTTTACAATAAAGACATGACTTTGTCTCG 871391 26 100.0 41 .......................... CGTTCTTTAACGCCTGCGGATAAAGGCATAATAAAGTCTCG 871324 26 100.0 39 .......................... TTTTGGTAAAGTGTATGTGTTACCTTGTTGAGCGTCTCG 871259 26 100.0 39 .......................... CAGTGATAGTCTTGGCGGCCGAGGACCATTGCAGTCTCG 871194 26 100.0 39 .......................... CATATTTTTCACCTTTTTTAAAATCCACACTCGGTCTCG 871129 26 100.0 39 .......................... AAAAATTATTAGGCACAAAAGACATTACCCAATGTCTCG 871064 26 100.0 41 .......................... TGATGAGCGTGTATCTTCGTTTGCAACACCATCTTGTCTCG 870997 26 100.0 41 .......................... AAAAAATCAACTAGCCACTGGTTTCCTTTACGAACGTCTCG 870930 26 100.0 39 .......................... ATCTTTGTGATCAGTCACTAGTAAGATCGTTAAGTCTCG 870865 26 96.2 39 ...T...................... CAATTTATCAAGAGAGCGCTAGACTAGTTACTCGTCTCG 870800 26 100.0 40 .......................... TGGATTTAACAAGCACGAACGGGTGCACAATCTCGTCTCG 870734 26 100.0 39 .......................... TTGCTAGTTATGGAAAAGGTTATGAAAAAGATTGTCTCG 870669 26 100.0 42 .......................... CATATCTCCTTGGGTTATCTGTGCCATCAAGGTTAGGTCTCG 870601 26 88.5 41 ...TT.G................... TTTGGCATGCCTCACATCAGACTCATGTCTAGCATGTCTCG 870534 26 88.5 0 ...TT.G................... | ========== ====== ====== ====== ========================== ========================================== ================== 29 26 99.1 40 CCCCATACGGGCGAGTGGATTGAAAT # Left flank : ATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAAATAGAGAAATGAGAGGTTATAGCTAAATATGTTATTGGCTAGCCTATGTCAGTTCTCTATAAACTGTGCTATGCTGCGCAGTCTCG # Right flank : TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCATACGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //