Array 1 54348-54019 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGIP01000043.1 Acinetobacter baumannii strain ARLG1946 ARLG1946_NODE_13.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 54347 29 100.0 31 ............................. GAAAAACGTAACGCAGAACTACAAGCTGTTA 54287 29 100.0 31 ............................. TCCAATTCGCATAATGAGCACTGATGTTAAA 54227 29 96.6 31 ............................A AACGGTAAAGTCATTCCATTTGTACGTTTAT 54167 29 100.0 31 ............................. CACAGTATGAAAAGATTGGTGATGCTTCGGA 54107 29 96.6 31 ............................A AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 54047 29 93.1 0 ........................AT... | ========== ====== ====== ====== ============================= =============================== ================== 6 29 97.7 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ATTTTAGGTGTCGACTTATTCATTTGAAAATTATATTGTGGAATAAGCCTTTAGAGATAGGTTTGTGCAACAAAGCCCCCTAGATCTGTCATGAGTTCATAAATTTCATTACACGATAAAAAAGTCATTTCACTTAACCTACATATCATTTTGAGGTATTTCTAACGAATCAAGAAACAAAATTCTAATGAAGAAACAGCGATACTATAAAAATAAAATTAGCTGCGATGGAAGGCTACTCTAAGTCGATATAAAAATTAAGCTTCTGTTGCGTACGAGAACCTTATTTTTAGTAATCTATTTTTGCATCACGCCAAAGCCATAATCATAAGACCAAGTAGGCACTTCATCTCTATTGTAAGGTGTTAAAGATATACGGCAGCCTTGCTCATTGGCAATTTGGTACTCTGCTTCGG # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAAGATGGCGTCAATTGAACAAATTTTATAAATAACTGTTTTATATAATTTAATATTTATAAAAAAATCCCAGTGTACACCACAGTGTACAAATTATCTATTGCTAGGCTATTTTACTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCCCTCACGCGCCCGCGCATTTTCTTGATTATTGTCTGACGGTATAGCGGTTTGCTGTGTTTTTTCGCTCCCATCATTTAATTGAAGCGGAATAGAGTATTTAAAGCTGCCCCTCTATTTGGTGGCTCAGGGGTCCCGAAAATTTGGGAGATTGAACATGGTGACTTTGGGTAACTCAGTTATCTACTGACTATCTTTAAGCTACTCGCATTTTAGAGATGTCCACACTGTATGACTGTACGAAAGTTTCGTAGTTCATTACCCAACGGAAATTTTCGCATACC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 18277-12182 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGIP01000173.1 Acinetobacter baumannii strain ARLG1946 ARLG1946_NODE_14.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 18276 30 100.0 30 .............................. CTATTGGGTCGTAAGTGATATGAGCCATTG 18216 30 93.3 30 ............................AC TATGGCAGAATACATTTATAAATGCAAGAA 18156 30 100.0 30 .............................. GCGAGTGCGTATAGAAATGGTCGCCTCATT 18096 30 93.3 30 ............................AA TCATATCTATTACATCGCAGTAATAGTCAT 18036 30 93.3 30 ............................CA TAAAGTTTTCCCCGAGCCAGGCGTAGCAGT 17976 30 96.7 30 ............................A. GCAAGTTTCATTTAATAAACGCACAATTTT 17916 30 96.7 30 .............................C AATAAAAGATGGGGCAACTAGTGCCCCGAT 17856 30 96.7 30 .............................G AACGTCAGATCTTTGCTGACATCGAGGGGC 17796 30 93.3 30 ............................CG AACGTCAGATCTTTGCTGACATCGAGGGGC 17736 30 93.3 30 ............................AA GCAGCAAAGTTAATGCTGTATAAAGTATTT 17676 30 93.3 30 ............................GA ATTTATCGGCATACTTGGAAACTGGTATTT 17616 30 93.3 30 ............................CA ACAATTCAGGATCCTGTAACTAATGTCGTT 17556 30 93.3 30 ............................AG TACGTTACAACATCAAATTTGGTCAAGGTC 17496 30 96.7 30 ............................G. CAACACAACGAACATGGGTTGGTATGACAG 17436 30 96.7 30 .............................G TTGTTAGGGCTATTTCTGCTTTATCCGATA 17376 30 96.7 30 .............................G ATGGTGCTGCTCCTCCTAGCCCTACGGGCA 17316 30 93.3 30 ............................CC TGAGCTATTAGCTAAAGAAAGCAGCTTTAA 17256 30 100.0 30 .............................. CAAAACTGGTCTTGGCGGTGTCTTAGTGAA 17196 30 100.0 30 .............................. GCACTAAACGCTTAGTTACAGACCAACCTT 17136 30 96.7 30 .............................A AAAAGGCAAGCGCACTCGATGTACCAAAGC 17076 30 93.3 30 ............................GC CAAATTTTGGCTTTTCACATGTCTAAATGT 17016 30 93.3 30 ............................AA ATACATTATGACCCTGCAATAACTTTGCAG 16956 30 96.7 30 .............................C AAACAAAACCTAATGACCCTACAGCACCTA 16896 30 100.0 30 .............................. AGACATTTTTAAGCCAGTAACAATAACTGT 16836 30 93.3 30 ............................AA CGTTTTTTTAAACGTGACTCAAATCGTAAA 16776 30 93.3 30 ............................CA AGCACGAGGCCAATCTAGCATTCTTGCTAA 16716 30 93.3 30 ............................AG GCAACAGCAATACAAATTGCTATGCCTACA 16656 30 93.3 30 ............................GC TATGGACAGGTTCGTTTAAAAGTTAAATTC 16596 30 93.3 30 ............................AG TGAGGATTCACACCTAGAAACTGGGCAGCT 16536 30 96.7 30 .............................G CTGCTTGAACAACATGAATTGCCCATTCAG 16476 30 93.3 30 ............................AA AAATATTGATACGATGGATTAACAACAGAA 16416 30 93.3 30 ............................AG AAGCGTCATGAATATTTGGTTTGGCTTGAA 16356 30 96.7 30 .............................G ATCATTAGTGCCTCTTCGGAAATCAACTTT 16296 30 93.3 30 ............................AA AGAGTATGTATTAGAGGGCTATGCACTTAC 16236 30 96.7 30 .............................G AAAATAATTAAATGGTCTATCACCGTCTTC 16176 30 93.3 30 ............................AG TAGATGCAGCACACAGCAATCAGGGCGCTC 16116 30 93.3 30 ............................AG CGCGGAAGAGCATTCGGGTGAGTTGGATTA 16056 30 93.3 30 ............................AG GCAAAAGGAACGGCTGGCTAACGCCACTAT 15996 30 93.3 30 ............................AC ATTCCAGCAAACAACAGTGTAGATCCAATT 15936 30 96.7 31 .............................C TTTCACAAAAAATGATGGTTATTTTGAATGT 15875 30 93.3 30 ............................AA TAAACAGCATTTCATCAGTTGCGTAATAAA 15815 30 96.7 30 .............................C CAAAAGAGCAAGCAGAATTTAGTGCATGTA 15755 30 93.3 31 ............................CA CCAACCGACAATGTAGCATCGGCAACTAAAC 15694 30 96.7 30 .............................A TGACACGCTATCAAGTGACGGTGCAAATAA 15634 30 96.7 30 .............................G ATCTCTCTTAGCTTTGTATTCAGGGTCTAA 15574 30 96.7 30 .............................G CTACAGATATAACTAATCAGTTAAATAACT 15514 30 96.7 30 .............................A TCCATTTTCTGATGGTGGCGCATTCTCTTC 15454 30 96.7 30 .............................C AAGCAAATCCCGATGATCCTACAGCACCTA 15394 30 93.3 30 ............................AC AAGTTAGAGCTATTAGAAAGAATTATTTAA 15334 30 100.0 30 .............................. TCGGGGTGGTTTTATTTTGCCTAAATTAAT 15274 30 100.0 30 .............................. GTATTGTTGGGTTTCTAGTTACCAGAGCAG 15214 30 96.7 30 .............................G ATTCAGTAGGTGCTAACTGGTATAACTTGA 15154 30 93.3 30 ............................CG TTGTTGGGTCTTGGTTGCGTAGTGGCCCCC 15094 30 100.0 31 .............................. ACTAGCCCATATGTCTAAACCGAATCCACGC 15033 30 96.7 30 .............................A AGCAAAATGCTTTCGGTATTGCGAATAATC 14973 30 96.7 31 .............................C ATTGCCACCTCCGAAAAAGTATTACCTGGAC 14912 30 96.7 30 .............................A AACCATTATTAGGGTTTACGGTATTACTTG 14852 30 93.3 30 ............................AG TCCATAAGACCCTCCATTTGTTTATATCTT 14792 30 93.3 30 ............................AG AAGGGTATAGCAAATATCGTGATGGAAATG 14732 30 96.7 30 ............................A. CATCGCCAGCAACAAACTGCAATGAGCCAG 14672 30 100.0 30 .............................. GGTGTGATCATCAATACAGATGGGACAGGT 14612 30 93.3 30 ............................CG ATAGAAGATACAGAAGAAAATAATGCTATT 14552 30 96.7 30 ............................G. CAACCAAAGAACCCCAAGCAAATCGAGCAA 14492 30 96.7 30 ............................A. TATCTAAGCGTCCCATTAGAAAACCTTTAT 14432 30 100.0 30 .............................. TCAGATGAAACCATACGCACTAAATGCATT 14372 30 96.7 30 ............................A. GTAATCTTGGTATGGGAGGTGTAAAGCCAG 14312 30 96.7 30 .............................G TTGACCCATCTATTGATGCATCTGTAAATA 14252 30 93.3 30 ............................CG ACTGCTCCTAAAGCTCCGCCGACTGACATT 14192 30 96.7 30 ............................A. GTGAACATGCATGCATTGATGCAATATGCG 14132 30 93.3 30 ............................CC ACTGTAGTACGAGTAACGTTACCGACTAAA 14072 30 100.0 30 .............................. TTTCACCTGATGGATGCTGTATTAAATCGC 14012 30 93.3 30 ............................AG AGGGTTATGTTTTGGTTTCTAAGGATAAGT 13952 30 96.7 30 ............................A. CATACATTAACTTTAAATAATCATTCTGAC 13892 30 93.3 30 ............................AC ATGAAAAACTAGCTTCCACGACATCAATCC 13832 30 93.3 30 ...........T.................C TTGCTGTGCATAAGCCTGTAAGTTATTTAA 13772 30 93.3 30 ............................AG TTGCCCGGATCACGACGATCATTAGAATAA 13712 30 100.0 30 .............................. GGAGTCATCAATAAGAAACAATCCATTTAA 13652 30 96.7 30 ............................A. CTAATCGATGGTGAAGATTTTGAACAAGAT 13592 30 96.7 30 ............................G. TATCTCAATGGTGTGACTTGTTAGCACTAG 13532 30 100.0 30 .............................. AATGCAATTCGGAGCATGGCGTACCGAAGA 13472 30 100.0 30 .............................. GTGTGGACTCCTCAATCAGCATCTTGAAAT 13412 30 93.3 30 ............................GC TCACAAGTCAAATACTATTTTGCATTATTT 13352 30 96.7 30 ............................A. CTTTTTGCTTATAGTAACAAGTAGCAGAGT 13292 30 93.3 30 ............................GA ACTGCAATGCTGTGAGTAACGAACCTTGAT 13232 30 93.3 30 ............................AC TTACCAGACACAGCACCTTCTTGAAGCATC 13172 30 96.7 30 ............................A. GACGGTTAGTTACTTTTGATGTACCGCCAC 13112 30 93.3 30 ............................AC TAACTCACCGCGATAAATAGACGCGATACC 13052 30 93.3 30 ............................AG AGACACAGAAAAAGAATGTGAACAATGGGC 12992 30 96.7 30 ............................G. CGATTAAATCAGTCAAAGGACCCTAAGCCA 12932 30 96.7 30 .............................C AAACTCACAACCTAGAAAAGATTGCTAAGG 12872 30 96.7 30 ............................A. GAAAAAGCCCCATTCGTTGTGAATAGGGCT 12812 30 93.3 31 ............................AC CAAAAGCTTTACGGTAAGACACGTTATGCAG 12751 30 96.7 30 .............................A CGAAAACAAAAGATACTCATGCACCAGAGA 12691 30 90.0 30 ...............T............AA CAGCATTTACACCAGCAACCTTTAAAGCAG 12631 30 96.7 30 .............................G TTACATGCCCAATTGGTTGGCGCATGTCAT 12571 30 100.0 30 .............................. CTAAGCGAAGGCTAACGCTCACATTCAAAA 12511 30 93.3 30 ............................AA CTGAAAAGATGTTGAGTGCAGGTTGTTCTT 12451 30 100.0 30 .............................. GATGCTGAAAACTTCACAGCAGGCAATCCA 12391 30 96.7 30 .............................G TAAAGGATGTGAGGAACGTCGTGAGTGGAT 12331 30 90.0 30 .................T..........AA ATAACCACGGTTATGGTAAGTCACTTTTAC 12271 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 12211 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 102 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //