Array 1 51452-52935 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXB01000010.1 Campylobacter curvus strain 13570 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 51452 30 100.0 37 .............................. CAATGTAACAGCCAAGTAACAAGCAGTAACGAAAACG 51519 30 100.0 36 .............................. AAAGGTAGTAAATCATAATCGCCCATATCGTCAGTC 51585 30 100.0 38 .............................. CCGCAAGCGTTAAAAAACTCTTTTTTACACTCCTCATC 51653 30 100.0 36 .............................. TCACTCGCCTCAAGATACTTTTCTGTGTTCATCTCA 51719 30 100.0 37 .............................. CGCTCATCACTGAAGCGTATTTTCCTGATGATGCGCT 51786 30 100.0 37 .............................. TCCTTTTTGCCTTTTTTAACTTTCTTTTTGTCTTTGT 51853 30 100.0 36 .............................. AAGGTCGTATACGATAATGATGGTAGCCGATTTAAA 51919 30 100.0 35 .............................. CATACACGAGCGCAAACTCTACATAAGCCACGAAG 51984 30 100.0 37 .............................. GGCGTGATAATAGCTACTTGCTAGACGAGGTCGCAAA 52051 30 100.0 37 .............................. CTTCCTTTGTTCCTCTTTGCCATATCCGGACAAGTCG 52118 30 100.0 34 .............................. CATACATAAAAGAAGCGACCTCATTAAGTTTATC 52182 30 100.0 37 .............................. AATTGTTTGTAAAACAGTATTTATGGGTTGCAGATGG 52249 30 100.0 35 .............................. CCACATCCGCGTAGCAGTGATAACCCAAATTTCGC 52314 30 100.0 37 .............................. CCATCGAATACCATAACGCAATGATAATGTGGCTTTT 52381 30 100.0 35 .............................. TGAGGATGACGACGCGGTAGATGTTTGGCAAGAGA 52446 30 100.0 36 .............................. ACCTATCGATTATAAATATTTGCCTGATGAAGTTAA 52512 30 100.0 34 .............................. ATTTTATAGGTTTGATTAAATGATCTCTTACATT 52576 30 100.0 36 .............................. ATTTTAAAGAGCCAAAGTAGCTGGAGCTATAGATAG 52642 30 100.0 35 .............................. AATCAAAAACTACAAACTGAGCTTGCAGACTTTAA 52707 30 100.0 34 .............................. GAAGGGCTTGGCTAGTTGCTTTCATAAGTGTAAT 52771 30 100.0 39 .............................. GATAACGAGTGCGGGGCTAATAAACGCGCTTGAAATTTC 52840 30 100.0 36 .............................. TTCTGATATGGAAACGCTGCACGCTCTTTATTTAGA 52906 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 23 30 100.0 36 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTATTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGTAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACTTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGCTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAACAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGAAATTTGATATTTTGGTGCT # Right flank : CTATGCACGCACATAGCCTTGAACTCTGACGCTACTTTGAGTTTCAAATTCCAACGGAATAAATTTTAACGCTTCGCCAACCTATTAAAAACACAAAGGAGCAAGGTTTCAAATTCCAACGGAATAAATTTTAACTTTGGAGGCTGACAGCTTCGGATATGAATTTACACTGTTTCAAATTCCAACGGAATAAATTTTAACACTGACTAGCATTATCCAGCGACTGCAAAAAAATTTGTTTCAAATTCCAACGGAATAAATTTTAACTCATTGAAGCCAAAAGTGAAACACCCTTTTAAAGGCGTTTCAAATTCCAACGGAATAAATTTTAACCTTCGCACCAATCATCGCTCACAATAGCGATTACGCGTTTCAAATTCCAACGGAATAAATTTTAACGGGTAGCGGCACGACTGCGGTAGCTTGCAAAGAGCGTTTCAAATTCCAACGGAATAAATTTTAACAAATAAGGATACGGGCACAGGTATGGGGCTTTATAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 53399-52975 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIXB01000010.1 Campylobacter curvus strain 13570 contig00010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 53398 30 100.0 35 .............................. GCTCTTTGCAAGCTACCGCAGTCGTGCCGCTACCC 53333 30 100.0 36 .............................. GCGTAATCGCTATTGTGAGCGATGATTGGTGCGAAG 53267 30 100.0 36 .............................. GCCTTTAAAAGGGTGTTTCACTTTTGGCTTCAATGA 53201 30 100.0 36 .............................. AAATTTTTTTGCAGTCGCTGGATAATGCTAGTCAGT 53135 30 100.0 36 .............................. AGTGTAAATTCATATCCGAAGCTGTCAGCCTCCAAA 53069 30 100.0 35 .............................. CTTGCTCCTTTGTGTTTTTAATAGGTTGGCGAAGC 53004 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATCATTATCACGAGACGGCTTTTAAAGCACTCCAAAGCCATCAAGCTTGATCGTTTCAAACACGTTTTTGTCTCTATCATAAGTGGTCGGAAAGATTATCGGCACGTTTTTTATCATCCTGCCTGATGAGTGATGCCATTTTAGGCTCGCTCATACGCAGCATATTGATGTCAGAGAGGATTAAATTTATATCATTTTGCTTAAAGCACACCAGCGCGTCTTTGGCGTTTGAGCACTTAAAAATTTGCTTTACGTATTTTTCTGCCGAGTCCTTTAAAGTCGCCCTTAACTCGTCATCGTCCTCGACTATAAGCAGCCTCACATCTTTTAAAATTTCTTTTATTTTGTTATAAATCGTCCGCTCTTGACTTCAGACTTTAAAAAGATCTCAAATTTAGTTAAGATCCGCCCTACTTTCAAGTACAAACCTCCCGTCCAGCTTTTCCGCCGCTAAAATTTTAGCGATATAAAGCCCCATACCTGTGCCCGTATCCTTATTT # Right flank : TCAAAGTAGCGTCAGAGTTCAAGGCTATGTGCGTGCATAGTTTCAAATTCCAACGGAATAAATTTTAACTCTAAATAAAGAGCGTGCAGCGTTTCCATATCAGAAGTTTCAAATTCCAACGGAATAAATTTTAACGAAATTTCAAGCGCGTTTATTAGCCCCGCACTCGTTATCGTTTCAAATTCCAACGGAATAAATTTTAACATTACACTTATGAAAGCAACTAGCCAAGCCCTTCGTTTCAAATTCCAACGGAATAAATTTTAACTTAAAGTCTGCAAGCTCAGTTTGTAGTTTTTGATTGTTTCAAATTCCAACGGAATAAATTTTAACCTATCTATAGCTCCAGCTACTTTGGCTCTTTAAAATGTTTCAAATTCCAACGGAATAAATTTTAACAATGTAAGAGATCATTTAATCAAACCTATAAAATGTTTCAAATTCCAACGGAATAAATTTTAACTTAACTTCATCAGGCAAATATTTATAATCGATAGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //