Array 1 1417916-1424056 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP036295.1 Desulfovibrio desulfuricans strain IC1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 1417916 29 100.0 32 ............................. CTTATAATTCTATGAAAAAATATGTTAATCCA 1417977 29 100.0 32 ............................. AATATCAGTTATGCTAGCCGATGCATCGGATA 1418038 29 100.0 32 ............................. ATGACCGGGCAATGAGTGACAACAGCAATTCT 1418099 29 100.0 32 ............................. ACCTCAAGGCCCGCATTGATTGCCAGTTCTGG 1418160 29 100.0 32 ............................. CCGCTGCAATTGCTATGTTTTCGTCAATTTGC 1418221 29 100.0 32 ............................. GCCCGGAGCGAACCACCACTCCGGGCAATCAC 1418282 29 100.0 32 ............................. CTGGGTAAACAGGTATGGGTTAGTCAACGCGA 1418343 29 100.0 32 ............................. GCCGCGATCAGCTCGCCGCACTCCTCAATGCA 1418404 29 100.0 32 ............................. TGGCAAGGACATGGAACCACTCTGACCAAATA 1418465 29 100.0 32 ............................. CGGGCGTCATATTAAAAAGCATGGGGCCAATC 1418526 29 100.0 32 ............................. CTTTAGCTCGCCCGGAGCAACGGCCAGCAACC 1418587 29 100.0 32 ............................. TCTTTTTCGAGTCGGTCTATGGCCTGTCCCTG 1418648 29 100.0 32 ............................. CGCACGGCAATATGTGCGGATTCTCCCAGAAT 1418709 29 100.0 32 ............................. AGCTCGCCGCCAGAAAAGTTGCGGCAGTCAAA 1418770 29 100.0 32 ............................. GACATTGTGCGCCTATACGGTAGCTGGCGCTA 1418831 29 100.0 32 ............................. CTCCCTGCCCGGGCGTGCTGGCCGATTTCTTG 1418892 29 100.0 32 ............................. CTACATTCAAAGTTTGCATTTTATTTCCCCTT 1418953 29 100.0 32 ............................. CGCCCGTACTTCCCCGGCAACGAATTAAACAT 1419014 29 100.0 32 ............................. CAATATGGCGTCAAAATGCTGGCGTATGGCCC 1419075 29 100.0 32 ............................. TTTAGCGGAAAAGCAATAAAAAGCCCCCGGCG 1419136 29 100.0 32 ............................. ACAACTTGTTATAGTTAAGCGTTGAATTATCC 1419197 29 100.0 32 ............................. TGTTAGGCTATTTGTCTAGCCTGTACTACTTG 1419258 29 100.0 32 ............................. CTTTCTTCGCTAAGATTGCAGGTCTTGTGCGT 1419319 29 100.0 32 ............................. CTTTTGACGCCCGCAACGTTGACCCTTCGCAA 1419380 29 100.0 32 ............................. CGTTTGTAATCATGGCTGTACCTTATGGGTTA 1419441 29 100.0 32 ............................. AGGGCCTTTCATGGCACGTACCGGCAACAGGT 1419502 29 100.0 32 ............................. AGACAAACACAAGTTGGGGGCCATATTCGGCC 1419563 29 100.0 32 ............................. GAGCCAAATATGATGAGCCTGTCCACAATACT 1419624 29 100.0 32 ............................. ATAGCGTGTACCATTGCCGCAAAAACTGGACG 1419685 29 100.0 32 ............................. CGTGCGCCAGTAAGTATCGTCTACAACTGGAC 1419746 29 100.0 32 ............................. GTCGTTGCATGCCCGCTGTGCGGGCATGGTTT 1419807 29 100.0 32 ............................. CCAGGACCGATTACGACATGTGGGGCATGTAG 1419868 29 100.0 32 ............................. TTTGGGTATCGCGGCAGCGTTGAGGCTATCGG 1419929 29 100.0 32 ............................. CCAACGATCAGGCACCGCTGGCCATTCGCGGC 1419990 29 100.0 32 ............................. AGCTGGCGCAGGCAGAGGGCAATACGCGCGCC 1420051 29 100.0 32 ............................. CACCGGCGTCAAAATCAATGTATTTTTCTACG 1420112 29 100.0 32 ............................. GGCAGCGAGTACAAACACGGCCAGATATCTGA 1420173 29 100.0 32 ............................. ACTCCCGATACAACGTGAGGCGGCAACCACCG 1420234 29 100.0 32 ............................. ACGCGCAAAAAACAGCTGATATATTGCCGGTT 1420295 29 100.0 32 ............................. GTTACGGAAAATATAGGTTTGCCATTAGCAAA 1420356 29 100.0 32 ............................. CTTGTATGCGGCATAACCGGGAATGGCCCCAG 1420417 29 100.0 32 ............................. GGGCTTTTTCAGTTTACCGGCGAGCAGCCCGT 1420478 29 100.0 32 ............................. TCAACGTCTATGTGCAAAACAGCGGGGACACC 1420539 29 100.0 32 ............................. CCTGAGTGCCATAGCGAGCTCAGCCAGTGTGA 1420600 29 100.0 32 ............................. GGCTGTATCAGAAGTGGGCTAACTGCGATGCG 1420661 29 100.0 33 ............................. TGGCGCGGCTGCAACAGCGTGTGAACGAACTGC 1420723 29 100.0 32 ............................. TGGCGCTTGTCTTCAAACCCGCGCTGTTTTCC 1420784 29 100.0 32 ............................. CTCAAACTGCGGTTCATCATCATCTGGGCAGA 1420845 29 100.0 32 ............................. AATGTCCCGGCCTTGGCGCACACATGTTCCCT 1420906 29 100.0 32 ............................. AGGTTCTCGACAATAATCCTGACCTTGATCCA 1420967 29 100.0 32 ............................. CGCGGGCTGTCTCTACCAGATCAGCTGGGCGT 1421028 29 100.0 32 ............................. ACGCCTTTTATGACGCCGCAAACGATGCTGCA 1421089 29 100.0 32 ............................. GTAGACGGCATCGTCTTCCGAGTGATGGTAGA 1421150 29 100.0 32 ............................. AATCCCCCTTCATCGAAACCAACGACAACTTC 1421211 29 100.0 32 ............................. GAACTCTTCCCAAACACCGGGGGGCGGCGTCC 1421272 29 100.0 32 ............................. CGAAAACCCCTGATCGAACAGGGCGTCTTCGT 1421333 29 100.0 32 ............................. TCGTTTGTCTCTGCTGCTTTCAGGGCAGTATC 1421394 29 100.0 32 ............................. CCGTTCAAGATGAGGTGTTGAGCGGCGTTGAT 1421455 29 100.0 32 ............................. ATGGTTTGGTATTTTTGCAAGGCGGCCGGGTC 1421516 29 100.0 32 ............................. ACTGCGCTGCCTGACCACAATGTTGTCATATA 1421577 29 100.0 32 ............................. CTGACGTTGATGGTCTGAGAGCTGCTGCTTGG 1421638 29 100.0 32 ............................. TCTTTTGCGCGTGCCATTATTGCACCACCAGA 1421699 29 100.0 42 ............................. TATTGTCCAGGTCGCGCGGGTCACGGCGCAGGGCCTGTGACG 1421770 29 100.0 32 ............................. AATTACAGTTTGGTCTCCATAGAGACCGGCGC 1421831 29 100.0 32 ............................. CTCAATTGTTGTTTGGCTAGAGAGTACTATGT 1421892 29 100.0 32 ............................. GATTTGCGCCCATACCACGAGGCTGTGAGCAT 1421953 29 100.0 32 ............................. ACTTCTACGGTCTGCGCGACACCGTGCGACTG 1422014 29 100.0 32 ............................. ACGGAACCAGCCTTGAGCTGGCCTCGGCGGAA 1422075 29 100.0 32 ............................. GCGGTGTCTGCCTTGCCGGTGTTGCGGTTTAT 1422136 29 100.0 32 ............................. CCGTTTTTTGGCAAACGTTCAAAAACGTTCAA 1422197 29 100.0 32 ............................. CACCTCACAGCTTGTTCGGGGATTTGGTCACA 1422258 29 100.0 32 ............................. ATTGTCGGTTACGTATGATTTGTCCCCGACTA 1422319 29 100.0 32 ............................. ACACGTGGGGGTGGCTGATGATCGCCATCATC 1422380 29 100.0 32 ............................. CTGGCGCATAAATACATCAACGAGAGCGGGAA 1422441 29 100.0 32 ............................. TTCAATGCCAGTGTAGCAGATGCCCAGCGCGC 1422502 29 100.0 32 ............................. GAGCTGTGCTGATGGGTGCTTTACTCGCCGCT 1422563 29 100.0 32 ............................. CCGTATTTTTCAGTAAACGCCTTAGCATCCAT 1422624 29 100.0 32 ............................. CGTGGACTGTACCGACAGCTCAATAATTCCCC 1422685 29 100.0 32 ............................. ACGACGATTCATCGTTCTGGCCTGAGGGTATC 1422746 29 100.0 32 ............................. TGGTTGGGGTTTATCAAAAGCGGCAATCCTGA 1422807 29 100.0 32 ............................. GAGTCGCCCGCGCCGCTGGCCATGGAGGGTGC 1422868 29 100.0 32 ............................. TACGCAGCGCCGCCATGGCACTGCAAAACCAT 1422929 29 100.0 32 ............................. GATTCAAAAGATTCAAAGCGCAGTAACATTGA 1422990 29 100.0 32 ............................. GGCAGGAGGCGGAGTTGCTCGACGCCCTGGGC 1423051 29 100.0 32 ............................. GCGGTTGATCCGCCGGTGGCTGTGCCGTCGTC 1423112 29 100.0 32 ............................. CGGTAAAATCTTTGTCTGGCACATCTATTGTG 1423173 29 100.0 32 ............................. AGCACAATACCAGGTTCTTTTCCACGCTCAAT 1423234 29 100.0 32 ............................. TCGCGCACAAATCCGAGATGGACAAGGTGCAG 1423295 29 100.0 32 ............................. CCGCCCGCCGGGCCGTGGCTACGCCTCCCACT 1423356 29 100.0 32 ............................. AAGAATTTCACTCTGCGTTTCGCAAGGGCTAA 1423417 29 100.0 32 ............................. ACCGCGCCATTCCATAAAATGGAGGCCGAACG 1423478 29 100.0 32 ............................. CTCACCAGATGATCGGGCGTCCACTGGCCGCG 1423539 29 100.0 32 ............................. ACACCATCCTCACCGTCCCAGCAAGCGGCAAT 1423600 29 100.0 32 ............................. GTAGCCGAGCTGCGAGAGCAAGCTAACATGGC 1423661 29 96.6 32 .C........................... TCGCAAAACTCCTGCGGCGTAATTTTGTCGCC 1423722 29 100.0 32 ............................. TTTATGCGGGCCTTGCGCTTGCCGTACCGGGC 1423783 29 96.6 32 .............T............... TCTGGAATGCATCGTTCTTGACGCTATCCAAT 1423844 29 96.6 32 ............T................ CACCGTGTCGGCCTCAACGCCCTGATCCCAGA 1423905 29 100.0 32 ............................. GTACATCTGACAAGTAAGCCGGTGGCGCTCAT 1423966 29 86.2 32 .......................T.TT.T TACATTTTCCATATGCGCAGCTCCGAGTAGAC 1424027 29 89.7 0 .......................T.T..C | T [1424052] ========== ====== ====== ====== ============================= ========================================== ================== 101 29 99.7 32 GTGTTCCCCACACGCGTGGGGATGAACCG # Left flank : GCGCTGCCGTGATCTGTTCAGGGAAACACGGCTGCTGCAAAAAATTATCCCAGCTATCGAAGAGGTGCTTTCTGCAGGGGGAATCGCCAAACCAGAAAGCCCCCCCGAGGCAATGCCCATAGCCATACCCAACAAAAAGGGGCTTGGTGATGCTGGTCATCGTAACTGAGGCGGTACCTCAACGGTTGCGGGGGTATCTGTCCCGTTGGCTGCTTGAGGTCAGGGCGGGCGTGTACGTTGGTAACTTCTCTGTGCGTGTGCGCCAAAAATTGTGGGAGGTTGTGTGCAAGCAGATAGGCGACGGCAACGCGGTGCTGGCCTGGACATCGAGCCATGAATCAGGGTTTGAGTTTTTAACTGTCGGTACTAATTGTCGCACGCAGGTTGATTGGGATGGGCTGCCGCTCGTCGCATACACCCCTAGGGTTGATGAGGGGGATGCATCGGTAGATTTGTGATGCGGCTGTAACATGCTGTTATAATAACTGTATTAGCGAAGA # Right flank : CCTCCACCATCATTCCGTTGAAAGCCAATGCATTCTGACATATGAGTCAACAATCGGGTGAGCGCCGTTACTTGATGGGGCGGCATAATAAAAATCGCGCCGCATGCCGACCCGCGCCGCATTCGCCCGCAGGCTGCCTTTTGCGGATGAGGATTACATGGAACTGAAACGAATTTTGGGCATTTTACGTGATCTGTTCTTGCCGCAGCCCCGCAACGCCTGTCCGCATTGCGGCGGAATACGTTGCATCGGCGCATGCCAGTTTAATGAAAAACAGCCCGTGGCTGCAGAAGACAAGGCCGCCCCAGCGGTTGCGCCGTCCGAAGCTCCCGCGTCTGTTACGCCATTTTCGCCGCCTGCGGCATCACATCTGGCACCGTCGCTTGCATCGTCGATGCCGTCCGACCGCTCCCCCTCATCCGCAGCTGCCGCTCCGCCAGCCAAAACCTTCGACGCCCCGACCGAACCGCCCGCAGCACCTGCCGGGCAGGCGGCATCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACACGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //