Array 1 3395117-3395631 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3395117 28 100.0 33 ............................ GTGCTGGAAGCGGGTGCAGTCGCAGCTGACCTG 3395178 28 100.0 33 ............................ GTACGAACGGGCCGAGGCCCGCGCCGAGCGGTT 3395239 28 100.0 33 ............................ GTCGGCGGCCTTGATGCCGGTGGAGGGGACGCC 3395300 28 100.0 33 ............................ GGTGTATGAGCTTCTTGGCCAAGGTGGGTTGCC 3395361 28 100.0 33 ............................ GCCGGGCCGTCAGCCGGCGGGCACGAGAGCGGC 3395422 28 100.0 33 ............................ GGCGTTCGGGGCGCCGTCGTACCCGATGGCCGG 3395483 28 100.0 33 ............................ GTGCCAGCCGGCGACGAACCCGGCCCAGGTCAG 3395544 28 100.0 33 ............................ GACCATCGTGGTCCTGCCTCGGGCGGTCGGCGG 3395605 27 82.1 0 ....C......A.....-......GC.. | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.0 33 GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Left flank : ACCGACGCCGACATCACCCGAGCCGTCGAAGCCGGCGCCACGGGCTACCTGCTCAAGGCCGAACGCCCCGAAGAACTCTTCACGGCCATCAGGGCTGCGGCCTCGGGGCGTACGGCGCTGTCCCCGCCTGTGGCGCAGAGGGTGATGACTCACTTGCGGAACCCGCAGCCGGAGTTGACCCCGAGGGAGCGAGACATTCTGCGGCACCTGACGCAGGGGCTGGGGAACCGGGAGATCGCCCGGGCGTTGTTCATCAGCGAGGCGACGGTGAAGACCCATCTGGGCCGGATTTACCAGAAGTTGGGGGTGGAGACACGGGCGGGGGCGGTGGCTGTGGGGAAGGAGCGGCGGTTGTTGGGGTGAGGGGGCGGGCGGCGGGGGTGGGTTCGTGGATTGGGGGGGTGGGGTGGATGGGGGGATGCGTAGGTTGGGGCTTGAGAGGGAGGGGAACAGTGATGGGCAAAGGGATGGCAAAGACTATCTGAAGGTGCAGGTGGGGA # Right flank : CCAAGAACCGATGCAAGGCCGGTGCGGCAGGCAGGTGATCCCCGCATGTGCAAGGACCGCCTGTTGCCGAACGAGTGACGTTCCCGGGTTGGCCGCTGATGCCCTGCCCCCACAAACCCGGCGGCCAAATGGCAGCGCGAGTACTAGCCACCGCCCCCGACGCCCCTCTCCACCTCCCCCAAAGCCTCCCCCCACCCAAACCCAGCCGCATCCCCCCGCTTAGGCAAATGCGGCTCCCCCTCGGTGAAGACCACCCGCACCCCCTGCCCCCGCAAGGTCTCCACCGCCCGCCCCACCGCAGGCTGCGCCCCCAGCGCCGTGGACCAGAACGGCGCCGCGACCACCGGCACACCGAGATGTACGGCCTCGGCCGGCACCCCCAACGCCACCGTGTCCGTGATCCCGGCCGCCCACTTGCACGCGGACGTGGTGGTGAGCGGCGCGACGAGCATCGCGTCCGCCTTGGGCAGCCCGCCGGACTGGCCGGGCAGGGTGTACCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGAGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4648366-4648092 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4648365 30 96.7 31 .............................A AGGTGAAGGAGGGGGCCTCGTGGCTCGGCGA 4648304 30 96.7 31 .............................T CGTCCCAGGTGATCGCCATGGGTGCGAACGG 4648243 30 100.0 31 .............................. GCGTCAACATCTGCGACCTCGACCCCAACTG 4648182 30 96.7 31 .........................C.... AGGCCGCTCCGGTCGTCACGAACATCATCGA 4648121 30 80.0 0 ..............G......CAA.C...A | ========== ====== ====== ====== ============================== =============================== ================== 5 30 94.0 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : AAGCACCACACCCCGCAACCCGCTACGCCACCGGCAAAGTCCGATACCAGGCGAACTGCTCGTGAGTGGGCATCCAGTGCTGGCCGCACCTGGAGCAGTACCAGCGCCAGTTGTCGGGGTCGTTGCGGAGGTAGGTCGTGTCCTTCCAGAGCCGGCCATGGATGTCCGTGTGGCAGGCCCGGTCAGGACAGGGCGGGGGAACGGGCGTGGTGCGCGGGCGAGTTGTGGTCAGCATGGGCGCCTCCGTGACTCGATGGGGTCAGGAGGGTGAAACGAGGGGGCTCGGGGCTGGGTGTGGGGCCGGGGCGAGGTGCGTTCGTTCGCGTGATGAATGGGGGATGAGGTGCGTGGGGGGGCCGGGGTCTGCTCCGCCGCCTCGGTCCGCTGCGTAGGATCTAGCGAGAACTCACGGCGAGGTGGGCATTTTGGGGCGAATATCGCTATCGGCGAAGCTTGCAGAAACTGAGGCAGGGGCGCCGTAAACCTGCTGGTCAGGGAGA # Right flank : CCCCGCCTCACCCCGACCCGGCGCCCAGCGCCGCCACCCGCCTTGCTCCCCCCACCCCCACCTCCTACCATGAATGCGCTTTCACAACGCGTGAGGCGGGTCGGTGGGCTCGGGTTCTGGATGGTCGGAGCGGGCGGGACGGGATGAGGGTAGGGGCGCGTGGGTGACGGGGTGGCGGGGACGCCGACGGTGTATGACGTGGCCGGGCGGGCGGGGGTGTCGATCGCGACCGTGTCGCGGGTGTACCGGAGTCCGGAGTCGGTGCGGGAGGCTACGCGGGAGAAGGTGCTCGTGGCCGCGCGGGAGCTGGGGTACGTACCCAGTGGGAGTGCGCGCGGGCTGGCAAGCCGGTCGACGGGGGTGCTGGGGCTCTGCTTCCCCGACTACTCCGACCCGGACGCCGAGAGCGAGGCGGCCACGGTGGACGCCGACGACGACCACGCCTTCATGCTCTACTCCGACCAGATCATCCGGGGTATGGAGCGGGCCGCGCGACGGCA # Questionable array : NO Score: 3.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 5107628-5106989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5107627 29 100.0 32 ............................. CAGCTGGCCGTCGCGGACGTGCTGGGGGAAGT 5107566 29 100.0 32 ............................. GACGCCGCTGATCTTGATCTCCCGGCGCTCGA 5107505 29 100.0 32 ............................. AACCTTGCCCTCGTTGTCGGTGATGACGGCCT 5107444 29 100.0 32 ............................. TACGCGCCCGTCGCAATCATCTTCGGACTCGG 5107383 29 100.0 32 ............................. GGCGCCCAGAAGCCCCGCAAGTCGTTCACGAT 5107322 29 100.0 32 ............................. AACACGTCGGACCCTGGATCCGATCCGGTGAC 5107261 29 100.0 32 ............................. GTCCGGCCCTTCCGGGGCCGTGACGACGAAGA 5107200 29 100.0 32 ............................. GCGCGCCTGGTACTGCTCGCCGTCGCCGAGGT 5107139 29 96.6 32 .............A............... CCGGCGGCCTGGACGCGGGGGCACCGGCCGAG 5107078 29 96.6 32 .........................G... GGTGTGGGCCCTGGGGAGGCTTCCTGCCTCTC 5107017 29 82.8 0 .............A...T.A...A.C... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 97.8 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GCATGAGCTGACGCCGGTTCTCTTCACGGTGGCGGAGGCGGGCGATCCGGTGGCGTCCGGGCTGGTGGACCGTCTGGCGGACGAGGTCGCCAACATGGCGGCTGTCGCGCTGGGGCGGCTGGGGTTGCTGGACTCGCCTGCGCCCGTGCTGCTGGGCGGGAGCATCCTGGCTGCGCGACGGCCTGGGCTGGATGCGGGGGTGCGGGGGGAGTTGAGCCGGCGGGCGCCACTGGCGGAGGTGCGGGTGGTGGAGGCTGCGCCTGTGCTGGGGGCGGTGTTGCTGGGGATGGATGCGGTGGGGGCGGGGGTGGGGGCTTATGGGCGGGTGCGGGGGTGGTATGGGTGAGGGGCGTGTGTTGAGGGCTGGGCGTGGGCTTCAATTGAGGGCGAGTTGAGGCTGCGAGGAGGGGCGCATTATGCGAATTTGGCGCGGAATGCCGGAGTTTTCGAAGTTGGCGTGGGCCGGGGGTTAGGCGGGGTAAACCCGCAGGTCGGAGAGA # Right flank : GAACTCGCGCGCGATAGCGGCGGACCGACCACCGCCCCGCTGATGGGCAGTCCACCCCCCTTGTACGCCCAGGAAGTGTTGGCGTGAGAGTTCTCCGCGCAGACGGCCGCAGAGGCAGCATCACCCCGAAGCGTTTCCGTGATCGGGCTCACACGAATGGGAACTTGCCCCCTACCCTGTCAGGGTCGACCTGTACGGGAAGGACAAGGCCATGCCATCTGACACCCCTCCGGACCCGTTCGCCGACGCCCTGGCATTCGGGCAGCGGATGGAAGTGCTGCGGACCAGGCGTGGGATGAGCCGGCCTGTTCTGGCCGGGCTGCTGGGTATGTCTCCCTCGTGGGTCAAGCAGGTGGAGCGGGGCCAGATTCAGATGCCGAAGCTGCCCGTGGTTCTGCGGATCGCCGAGCTGCTGCGCGTGCGTGACCTGGCCGACCTGACGGGCGATCAGACTCCGTCGGTCGAGCTGTTCATCGGCCCCGGGCACCCCCGGCTGCCCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 5365276-5365427 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ========================================== ================== 5365276 23 100.0 42 ....................... ATCTTGAACGGACGAGTCCGATCCGGACCTCGCCCCAAAACC 5365341 23 100.0 41 ....................... GTCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 5365405 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ========================================== ================== 3 23 100.0 42 CAGCCCGGCCGGCGCTTGAGGCC # Left flank : CCAGGGCCGCAAGGCATCCAGCGCCGCCGGAGCGGGCGGCGCGTCCCCGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACACCCCGGCCCGCCGCCGCCCCCTGGGTGACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATGGCGCCGGCGTCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCCCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCACCCCACCGCGAAAAACAGCGGGCACGACCGCCGAGAGGCAACTGGCCGACCGCCGAAAAA # Right flank : CACCCCACCGCACCCCCTGCCGGGGAGGGAAACCTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGGGCAAAATCAAGGGAGTCCCGCAGAACCCGCGCGACCTCACGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCGAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGTGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 5 5630032-5630182 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5630032 29 100.0 32 ............................. CGCCAGTCGACCGGCGGGTGCTGAAGGACAAA 5630093 29 100.0 32 ............................. ATCCGCAAGAAGCTCGCGGCGAAGCTGTCGAA 5630154 29 75.9 0 .................A....CCCA.GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 92.0 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : TACCTCGGCGGCGCCTCCATCGACTTCGTAGACACCATCGAGAAGCAGGGGTTCACCATCGACAACCCCAACGCCACGGGCTCCTGCGCCTGCGGTGACTCCTTCAGCTGAGTCGCTTCGCCGAGAGGCGGTGCCCCACTTCGGTGGGGTGCCGCTTTTTTTGCTGGCCGGGCCTCACTTGCCGGCCGGGCTCGGTGGCCTCAAGCGCCGGCCGGGCTGGTTTGGCCTCAAGCGCTGGCCGGGCTGATGGGGGTCGTGTTCGGGGTGCGAGCCGTCGGCCTGTGCGGTCACAGATGGCCTCAATCGCCGGCCGGGCTTGAGTTTGGCTGGGCTTGGACGGTGGCCTCAACTGTCGCTGCTGCTGGGGGTTCTGGGAGAGGATGGGCGGGGCTTCGGGCGCGACAGGGGAGGGTGTTTGCCGACTTTCAACCCAATTGCGGCAATCTCGCAAGCTTGCAGAAATAGGCTGAACTGCTAGGCAAAGCCACAGGTCATCGAGG # Right flank : GACCCCAGGTCTCCCACCCGCTCAGTGCCACCGCTGCGCGCACCAGACGCCCCCAGCCCAGCGCCTCCTCCCATCAAAAGGCCAAGATCGTGACCGTGGCCGCGTAGATCACCACCAGCAGCGCCCCGTCGAAGCCCAGGCGGAACCAGCCGCGTTCCTGGCGGATGAGGAGGCCGCCGAGGACGACGGTGGTCATGACCAGGGCGGCGCTGGTGAGGAAGAGTTCGTCGTTGCCGGCGGCGTGGTAGAGGGAGCCGCCGCGGTAGGCGAAGTCGCCGACGGCCAGGTTGAGGACGTCGAGGGAGTTGCCGCCGATGATGGCGGCGAAGGCGAGGGTGATGGCGCCGCGGCGGACGGCGGCGATCGAGGTGACCGCTTCCGGGAGGCCGTTGATGACGCCCAGGATCACCGCGCCGACGAAGCCCGCGCGCAGGGTGGTCGCCGAGAGGATGCCTTCGGCGGCCTGGGTGACGGCCCACCCGGCGACGACCACGATCCCG # Questionable array : NO Score: 4.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 6635680-6635406 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014485.1 Streptomyces albidoflavus strain SM254 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6635679 29 100.0 32 ............................. CGGTCCAGCTCCCGCGAGGCGCCCCGCACCAT 6635618 28 96.6 32 .....................-....... CGCATCCAGGTGTTCATCCGAGCCCTGCTGAT 6635558 29 96.6 32 ............................G ACCTTCTCGGCGCCGTCGGCGAGCGACTCGGC 6635497 29 96.6 32 ........................C.... TACGAGGACGTGACGATCAACGGCAACACGTT 6635436 29 93.1 0 ...........A................G | GC [6635417] ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GTCGTCCCCGCGCGAGCGGGGGTGGTCCC # Left flank : GGTCGAGCGCGCTGTCGGCGCGGGGCGCTAGCCTGCCCTCATGTCCTCCCTGCCCGCAGCCCGGCCGCGCCCTGCCGCCAAGGTGAACGCGGAGATCCGCGCGCTGATGCTGCGCTCGGGCGGCCGCTTGGCTGCCGGCGACCGGGCCCGGTACGTGGAGCTGATCGCGGAGTGGGCAGAGGCGGTCCGCGATGCCGTCCGACCTGCGGCGTAGGATCCGGCCGTGGACATCCCCGACAGCCTGATCGACCTCCAGCGCGCCGCCGACGCCGAGTGGGCGCGCCTCGCCGAGCTCACCGACAACGACGAGCGGGAGCGGCAGCGGCGCGTCTGGTTCGAGGCGGGCGCCCGGGCCCAGGCCGCCATCACCGAGTGGGCCGTCGCCGAGAACAAGAACCGGTACAAGGTGGAGAAGGCCGTGCGGGAGGCCGTGCGGCACCCGGAATCCGGAAGCGACTGAGAACCGGCGCCCCGCCCTGTAGCGTCCCAGGTCAGGAAGC # Right flank : CCATCCGTGTCCAGCTCCTAGGTGGGCAGCCGACTCTCCTGCTACTGCGGGGTGGCCCGCCGTTGGTCTTCGGCTACAACGTCTCGAGCGGTTCTCCCCGCGGCCGCGGGGTACGACGAAGCGCCCCCGCCGCCCTGCATCGGCAGGGGGCGGGGGCGTTGTCAGTCCTCGTCGTCGGGCCCGGGCCACGGGCCGTCGGGGTAGACCGGCTCGCGGAACGGGTCGGCCGACGGGATGGGCACCGGGTCGGCGAGGCCGAGGGCGGCCAGGGCGGCGGTGTCTCCGGCGGCCGGGTCGATGCGGCGCTCGGCCGGACGGGGCTCAGGGTCGGGCATGAGGGTCCCCCTCGGGGCGTTGGGCGCGGGTCACCATCAGGGTCCGCTGCGCGAGCAGGCCGGCGACGAGCAGCAGCAGGCCGGCGCGCACGATGCGGAGCACGGTCGCCGGGGTCCCGTCGAGGCCGACGATGGTGATGACGACGGTGTACAGGCCGAGCAGGC # Questionable array : NO Score: 3.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGAGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //