Array 1 14165-13351 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MPUS01000039.1 Pseudomonas aeruginosa strain CCF_839 contig_39, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     14164	    28	 100.0	    32	............................	ATCACCGGCGCGCTGGCCTTCGGCGCCCAGGC	
     14104	    28	 100.0	    32	............................	TTATCAGTAAATACGTGGCGACTTGGCCACCC	
     14044	    28	 100.0	    32	............................	TTGCTGCGTGTTGCAGCGACACCCGTTCAACA	
     13984	    28	 100.0	    32	............................	ACTGGAGATACGTGCACAGATCGGACGACACG	
     13924	    28	 100.0	    32	............................	ATATCAGTTTGCATGGTTTGCTCCTACCAAGC	
     13864	    28	 100.0	    32	............................	TTGCATCGCACCCTCCTGCTCACCGACCAGGC	
     13804	    28	 100.0	    32	............................	TGAACGTTCACGCATCACGCGCCTTTCCGGCC	
     13744	    28	 100.0	    32	............................	AGGCAGACGAGTACGCGCGGTCTCGCGAAGTG	
     13684	    28	 100.0	    32	............................	AGAACATGGCCCGGCTCCCGACGTTGCTGCGG	
     13624	    28	 100.0	    32	............................	ATGACGCAAGACGAGCTTGTCCGCCTTCTGGC	
     13564	    28	 100.0	    32	............................	GTTTGCAGGAAGCGGCGCTATCGCACCGAACT	
     13504	    28	 100.0	    32	............................	ATAGCTACGCCGAGCCAGTTGTAAGCTGACGC	
     13444	    28	  96.4	    32	........................A...	TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA	ACGGAT [13420]
     13378	    28	  75.0	     0	T.........AC.....TC.TC......	|                               	
==========	======	======	======	============================	================================	==================
        14	    28	  98.0	    32	GTTCACTGCCGTATAGGCAGCTAAGAAA	                                	       

# Left flank :   CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAACACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGGTCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGGGCTTGGAAGGTTGATGGGGTTTTGGTCTA
# Right flank :  CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCGGGGG

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTATAGGCAGCTAAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [14-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//