Array 1 350174-346646 **** Predicted by CRISPRDetect 2.4 *** >NZ_WACP01000001.1 Paenibacillus tengchongensis strain SYSU G01003 NODE_1_length_701281_cov_174.341456, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 350173 33 100.0 36 ................................. CATGATATTTGCGGCATGAACGGAGAACACATCGCC 350104 33 100.0 34 ................................. AACGCCTTGTACCAGGGCAGACCTACCGCACAGG 350037 33 100.0 34 ................................. ACCGGAATACCTCCACGAAACCGTTTATAATTAC 349970 33 100.0 35 ................................. TAACGCGCCTTGCGCTAGAGTTAGCGAAGGAAGTA 349902 33 100.0 33 ................................. CCCAGCGGGGGGGCCAGTAACACCCCCGCACAA 349836 33 100.0 35 ................................. AACTTAAAGACGATCCCAGCAACGAGACACTGAAG 349768 33 100.0 35 ................................. ACCAAGGAATTCGTTGAAGAGTGCTCAAGCTTCCC 349700 33 100.0 33 ................................. AACTATACTGGCGGATCTGAAGGATCTGACGTA 349634 33 100.0 36 ................................. TGATATGTCGCCCGGGCCCGCGCTGTAGCAGCTGCT 349565 33 100.0 33 ................................. CATTGCAGCAATCTCCCTAATTCTTCTCATGTC 349499 33 100.0 38 ................................. CGTACGTGTCCACGTAGTATCTTGTAAACCCAGTTGCA 349428 33 100.0 33 ................................. AGCGATCGATGTCCGGCTAATCGTATACTTTCC 349362 33 100.0 34 ................................. GCCCAATGTGATGCGGTTACAACATCATAACTAG 349295 33 100.0 33 ................................. AGCGTTTGATATGGAGACAGATAAGCAAGAAAA 349229 33 100.0 33 ................................. AGCGTTTGATATGGAGACAGATAAGCAAGAAAA 349163 33 100.0 36 ................................. AAAAGCTACGTGTACAATTATCTGGCTGCCGAATGT 349094 33 100.0 36 ................................. AGCGTGATCTTGCTAGTTATGATGTTGTAACCGCAG 349025 33 100.0 33 ................................. CTTGCCATCAAATCGTTTGAGAATCTGCATAGA 348959 33 100.0 33 ................................. AACGTCTGTAACCTTATCCTGCCGTTCAAGGTA 348893 33 100.0 34 ................................. CCTAGCCCTACGGGTTGCCTCAGAATTACTTATC 348826 33 100.0 35 ................................. ATCATCCGCCCATACAAAAATGGGGCCAGCACTAG 348758 33 100.0 34 ................................. TAATGACGGTCAAATGGAAACGGTTTTGAATGAA 348691 33 100.0 33 ................................. AATCTGCCTAAAGTGCGTTTGACTTCCAAAATC 348625 33 100.0 33 ................................. AATCTGCCTAAAGTGCGTTTGACTTCCAAAATC 348559 33 100.0 33 ................................. TTCGACCCACTTCTCATATTCCTTGTGTTCGGC 348493 33 100.0 34 ................................. AGCCCGTAGTTTACCAGTGCGGCATTGTGTATCC 348426 33 100.0 34 ................................. ACCGCAAATCGAACTACCTGATCGGTAACACCTA 348359 33 100.0 33 ................................. CCCGCAGGAAGATCGGTCTATCATGATCGTCGC 348293 33 100.0 33 ................................. AGGCGGTTTGGGAACTGTACGGCGTTGATCCTG 348227 33 100.0 34 ................................. AGAAGAGGTGGTGAAGAGTAATTTTTGATAAAAA 348160 33 100.0 33 ................................. CCCGACCTGCTGGAACAGCGCCTTAAGGAGAAC 348094 33 100.0 33 ................................. CCTGACCCTACCGATCCCGTATATAGAGTTATC 348028 33 100.0 35 ................................. AAACCATTCGGACCAATATCCCGCTTCAGTTCGTT 347960 33 100.0 33 ................................. ATTTGCATTGAGTCCCAGAGCCTGAAATCCTTC 347894 33 100.0 36 ................................. TGACAACAAGAGGGCACATCTTTATTGGCCCGGCGG 347825 33 100.0 38 ................................. CTAAATTCTCCCGTCGTACAAACGCAATAAAAGACAGC 347754 33 100.0 34 ................................. TTCAGAGCTTTGGAAGTTACTCATAATCCTGATA 347687 33 100.0 36 ................................. AATTTGCTGCAACGTGTTTTGGTTAACAAGACTGCA 347618 33 100.0 35 ................................. CTTTGCGTCGGATCTGACCGCAGTACGGGTGACTC 347550 33 100.0 35 ................................. TTTGATATTGAGGGCAAATTGCTTGATGAGCTTCC 347482 33 97.0 34 ............................T.... CGTAAAAAAACTCATCATTGCTGCCGCGCTGTGG 347415 33 100.0 36 ................................. CACTATTTACCGCATTGTCCCACAAATGGTGGATTG 347346 33 100.0 33 ................................. TGCATCGAATATAGGAAATTGAAGGTCACCTGC 347280 33 100.0 34 ................................. AAGATTTCTTGAAGTAATGACCGTACATCTTTCC 347213 33 100.0 33 ................................. TTAAGACGAGTATCCAGGAATGGTTTGGTGTCT 347147 33 100.0 34 ................................. AATCACCGTCCAGCAGTAGTCCGGCAATGTCCGG 347080 33 100.0 33 ................................. CAGTGTCTACTGGCGCGATAGGAGGCAACAAAA 347014 33 100.0 34 ................................. TGCGAGTCCGGCAAGCTCGGTTACCTTTGGTATC 346947 33 97.0 35 .................T............... CTCCGGGGTCATCTTACGTGTGATGCACTCGCTGT 346879 33 100.0 33 ................................. TACTCCGGTATCGTATCACTATGGACAGATTTA 346813 33 97.0 35 ...............T................. AGCCTAAAATGGTAGTTGTCCAGACTATCCAAAAC 346745 33 90.9 34 ....T........C.........A......... CTGACGGACAGCTACTATTGCCGTTACAAGTTCC 346678 33 72.7 0 .......C..T...AA..........A.CGCT. | ========== ====== ====== ====== ================================= ====================================== ================== 53 33 99.1 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : CTTATGGAAGTAGGGGGTATAAGTTGCTTGTACTGATCACTTATGATGTAAGCACGAAGAATAAAGAAGGAAGACGGCGTCTATCCCAAGTCTCGAAGAAGTGTTTGGATTACGGCCAGCGGGTGCAAAATTCTGTATTTGAATGTATCGTTGATGCTACAGAGTTCCGTAAATTAAAGTTTGAACTGGAAAAGCTGATAGACGAGGAAACGGATAGTCTGCGGTTCTACAATCTGGGTGAGAAGCATAAGACCAAGGTGGAACATATCGGAGCCAAGAGTTCCTACGATATGGAGGGACCGTTGATCTTGTAAGCTCAGGTGCGAATGCCAAGCTCCCATGATTTTCCCGGGAGATTCGCACCTCAGAATTCGTCGATCGTTGTCGAAAGTGCGGATGAACATGGATTGTCAAGATGTGATCAATATGATTTTGGGATTGGAAGCTGCGATAAATTCTCCGTTCAATGCTTAGCGGCGATGGGTCGGCGATTTTTCGCT # Right flank : CGTCGGAATGTGCAACAATTACTATGGCTCTTGATGGGGAAATTTCTTTAAGTTAACGAGAAGGATTGTTTATTTAATTATCATTACTTTCTTTATTAGGACATTTAATTATGGAGGCAGGTATGGAAATTAAGATACGAGAAATTATTGAAGACGATTATACTGAAGTTGTTTTCTTATGGAACAATGTACTTGGCGTTCATACTGTTACGTATGAGAGCTTTCACATTAAGATGGAACAGATGAGAAAGGTAGGCAATTACAAGACGTTTGTTGCGTTAATTGAGAACCATGTTGTTGGTTTTATATCTAGCGTCCATGCATTAGCCGTAGGGTCTGCGAATGATTATCTGCATATAACCGGACTTGCTGTACATAATGATTTTCAGCGACATAAGGTAGGCACTGAACTGCTAAGATACATTGAAAATCATGCGAAAGATTGCGGAATATCCAGCATCATTTTATGCAGCGGGATGAAGCGAACCGGGGCTCATGCT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 363691-359958 **** Predicted by CRISPRDetect 2.4 *** >NZ_WACP01000001.1 Paenibacillus tengchongensis strain SYSU G01003 NODE_1_length_701281_cov_174.341456, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 363690 33 100.0 34 ................................. ATGCTGGCAAGCAGGTGGACCGTGACGCTTGTCT 363623 33 100.0 34 ................................. TGTAAGTGCAGGGAACATAAATGTAGTTAGAACA 363556 33 100.0 34 ................................. AAGAACAGACAGAAGGCATTAAAGCGGTGACATA 363489 33 100.0 33 ................................. TTTAACAGATGCAGGGCAGGCGATTGAGAGAGC 363423 33 100.0 36 ................................. TTCGGGGCGATGACCAGGCAACGGCGGACGGCGAAC 363354 33 100.0 35 ................................. ATTTTAATTTCCACGGCAAGGCGGCAGCACTGATT 363286 33 100.0 34 ................................. TCAACGCCTGTATAGCCAAGGTCTTCGAGCTTTT 363219 33 100.0 35 ................................. TGATCAATAAGCTCGCCGTCGTAAAAGACGTTGAC 363151 33 100.0 34 ................................. TGTCCTTCCCGGAGCCCCACCCGCGCCGGCGGAA 363084 33 100.0 37 ................................. GGTTATGTATTAAGTTACTATGTGCAGGGAGTTAGGC 363014 33 100.0 36 ................................. AATGGAGAATAATCCTTGAACTTTTTGACCAATAAG 362945 33 100.0 34 ................................. AACAGCGCCGATTTAATCCGATCTTTCACAATCA 362878 33 100.0 34 ................................. CGTTCGGGACCTCGATGTATTTACGTGCTGCGGC 362811 33 97.0 35 .....................A........... CCCCTAATAGGTTTAATTTTGACATAGAACATTTT 362743 33 100.0 34 ................................. AGACCACTTGACATGCTTTCGAAGTTCTCGCGGA 362676 33 100.0 34 ................................. CCAAGTGGACCCTGCGCCATCGCCGCCATACTCC 362609 33 100.0 36 ................................. TCTAAAAGCAAAGGCTACCTGCCGCCTGGTGCGAAC 362540 33 100.0 33 ................................. ATTTTGGCGACGCTTGTTTTAATCAAAGGCAAA 362474 33 100.0 33 ................................. CACCAGCCGGTAAACCGCCTTGCGCTTGGTGTG 362408 33 100.0 35 ................................. CGCGCTACGCTTGCCGCCCGCTTTACAAGGTCTTG 362340 33 100.0 34 ................................. ATCCAGGCGGGAGAAACCATCATTGATATCCGCG 362273 33 97.0 33 A................................ ACCTTTTGTTATCAAAATACCAGCCGGCGCAGC 362207 32 97.0 33 ..............-.................. AGCGACAGCAATCCACTTTTCATCATCTTTGAA 362142 33 100.0 35 ................................. CCGCAATCTTTAGGTAGTACGGGTGGACTGAAAAC 362074 33 100.0 35 ................................. TTTCGCTCTTGAGATTGTACTCTCCAGCTTGATCA 362006 33 100.0 33 ................................. AAACCTGAACCGAAGGTATCCGAACTAATCATT 361940 33 100.0 34 ................................. GAGATTGTTGTCTTTGGTAACGTGTATCCGTTTG 361873 33 100.0 34 ................................. CGACAACAAAGCCAAATCTTAAAATCGTATTTAG 361806 33 100.0 35 ................................. AAACCGAGCAGCGACTGAGCAAGTGAATTGTTGTT 361738 33 100.0 33 ................................. AAAAACCCAATAAAGAGTAACAGGTTTATTATC 361672 33 100.0 33 ................................. CACGTAAATAAAATTGTCTGTTGATGTATTTTT 361606 33 100.0 35 ................................. GTACTCTACGCATTAGCCTTGGACCACAGTATTGA 361538 33 100.0 36 ................................. AAGGCTGCATACTTCAAACAAAATGTAACCGTTTGG 361469 33 100.0 34 ................................. AACGTACCCGTTTAAGGTTAAAATGTTGAACGAG 361402 33 100.0 35 ................................. TGAATCAAGTCACCAAGAGTGCAGCAAGCACCAAC 361334 33 100.0 33 ................................. TTTGCCGTGGGATATTTACAGAGTTGTGGCTGT 361268 33 100.0 35 ................................. TATAGCAGCGTTGTATCTGGTCCGTTTGATATTAC 361200 33 100.0 36 ................................. GTTTACGAAGGGTATGCGGATGTGGAACATCTTGGC 361131 33 100.0 35 ................................. CAACTCCGCACGCTGGGCATCAATAAAAGTGGCCA 361063 33 100.0 35 ................................. GGACATTTAACCTGGATGAATTGGTCGAGTATCTC 360995 33 100.0 34 ................................. TTTGCCATCCTTTAGTAAACGAAACGAGTAATGT 360928 33 100.0 34 ................................. TTCGTGGCGCCGGACGCTTTCTTCCAATGCCTTT 360861 33 100.0 35 ................................. CTTTTGGATGCTCGGCAAGGGATTTTGCCGTAGCC 360793 33 100.0 33 ................................. CGGCTACCGATCTCTACAGCATTGACCTTGCGA 360727 33 100.0 33 ................................. CACGCGAGGATTACTCCCATGATCGTTACGGCC 360661 33 97.0 34 ......................C.......... AATATTGAAGATTTGCAGTAAAACTAATACTGCG 360594 33 100.0 36 ................................. TATGGCCCTGTCAATCTGCTCTTGCGGCCGCCGTAC 360525 33 100.0 33 ................................. CATCAATCATACTGTCGATAATGTCCCATTGCT 360459 33 100.0 34 ................................. TGAATGGACCGTCCATATCTCAGATTGTGAAACG 360392 33 100.0 34 ................................. TTCGTCGTCCATATGATCGCGCTTGCCGGCGCTC 360325 33 100.0 35 ................................. TCCGCCTGCAGACGCGGTATTATCCCGTTAATCTG 360257 33 100.0 34 ................................. AACGTACCCGTTTAAGGTTAAAATGTTGAACGAG 360190 33 100.0 34 ................................. ATAACTGGTCATGTTTATTCAGCACCCGATTATT 360123 33 100.0 33 ................................. AGTACGTCTTGCTGTTGGTCAGGCCGGCCACAA 360057 33 87.9 34 ..A..C...C......A................ TTCCCAACGCTTCCCCTGCTAGATATCATTTATC 359990 33 72.7 0 ...A...T.CAC.C..A...........A...A | ========== ====== ====== ====== ================================= ===================================== ================== 56 33 99.1 34 GTCGCACCCTGTATGGGGTGCGTGGATTGAAAT # Left flank : CGCTCGACTACCCGGTGACGTTAAGCTCCTTCACCAAGGGGCGGAGCACGTTCACCTCGTTCTTCGCGGGCTATGAGGAATGCCCGCCGGACGTCAGCGCCGAGCGCACCCGCCGGGGCGTGAACCCGCTCGACCAGGCCAAATACATCCTCAGCGTGCGCAATGCGCTGCAGGGGTAAGTTATGAGCGGATAAAAGAATGAGTGAATGCTTGGGTGTATGAATGAACAGAAACGTTGAGCCTATATCTTGTGAGAAACAGCAAAATTTCATTTGGAAATTATTGGGATTTATACGAACGTTTATGCGGAGCTACTGAGGTGCGAATGCCAAGCTCCCATGAAATCCCCGGTAGTTTCGCACCTCAAATTTTGTCGAATAAAAACGAATTTGTGTCGACTGCCATAAAGTCAATAGGCAGCCTATATTGATTATGTTATTGTTGAGGAGGAAACGACTGAAAGCCATACGGATTTTAGCTGAAAGTGGCCTAAAGTCGCT # Right flank : ATGTCCACTACAGAAATCTCTTGAGAGAAAGGATATGCATACATGGTTAAATGGGGAAAAGTGCTTATCGTCTTATTGGTATTAGGGGCTTCTTTATATCTGGGCGCATATGGCGTAGGATTGAAGGGGATTATTGCACTAGGCCTGCTCCTGAGTATTTATTTCCGCACGAAGACAATTGAAGCCGATCTTCAGGCAATTAAGAAGCATCTCGGAATTTTGGAAGGAGAGCGGCCGGTGAGCAACGAGGAAATTGAGGCGGAATTGGAGCGGGAAATGCGTGCGGAGGCGGATGGGAAGAAGGAATAGGTTATGCCTTCATATCCATTGTGGACGGCATCATCTCTCAGTAAAAATTTCGCAGCTTAAGGTGCGAATGCCAAGCCCCTATGAAATTTCTGGATGATTCGTACGACAAATTTCATCGAAAACACACGGATATGTCTAAATCTTTTAAAAGTCAATATTCGGTCTATATCCATTATGATATTCTTAGGGAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTATGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.50,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //