Array 1 286143-287492 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHSQA010000016.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-038 tig00006404, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    286143	    32	 100.0	    34	................................	AACACCATTTTTAGCGTGATACCGCAAAAGGTAC 	
    286209	    32	 100.0	    34	................................	ACAGCACTACCCTCCATTACCTGTCAACTCAGCA 	
    286275	    32	 100.0	    34	................................	ATAGTAATCTTTAAAGTCGGAGTGTTGGCTATCT 	
    286341	    32	 100.0	    35	................................	AAGACAACGATTTGCTATTCATCAAGGTATCTAGC	
    286408	    32	 100.0	    34	................................	AGCTGATTGCTGATGGCTTCGATGAGGTTAAAAA 	
    286474	    32	 100.0	    34	................................	TCCTGCTCTTTTACCTCTAATTCTCTGTTCTGCA 	
    286540	    32	 100.0	    33	................................	ATAATATTAGATTAAGCCAATGATCAGAGTAAC  	
    286605	    32	 100.0	    33	................................	ATATTTACAGCGGAATGCTATTCCAGTTGTCAA  	
    286670	    32	 100.0	    33	................................	TGTTAGATCATCAATTATTCCCTCAAGGTGGAT  	
    286735	    32	  90.6	    35	.........CA.A...................	TTGGTATAAAAATGGTGGTATCATGATGACTCCAA	
    286802	    32	  90.6	    33	.........CA.A...................	ATCCAAGTTTTGCTCAAGCATTATTGAAGAAGA  	
    286867	    32	  90.6	    33	.........CA.A...................	CATGTCTATGACGAGTTCTCCTTGGACATTCTC  	
    286932	    32	 100.0	    35	................................	CCTGTGGTGATGTAGTTGCGATTGAACGGGTGAAA	
    286999	    32	 100.0	    34	................................	AATACCAACAGCAACCCCCATTGGCAAGAAACGC 	
    287065	    32	 100.0	    34	................................	ATCTCCAGTTAGCACCTTGTAAATCGGGTCTATG 	
    287131	    32	  90.6	    35	.........CA.A...................	TGGTTCAGGCTTTAGAACAAAGCGAGAAGCTATGA	
    287198	    32	  90.6	    34	.........CA.A...................	GTAACCCGCCCTTGCTCTGTTACTTAAATGATTT 	
    287264	    32	  90.6	    33	.........CA.A...................	AGCATAGCCCCACTTAAACATGTTCTCGAAGTC  	
    287329	    32	  84.4	    33	........T..CAT.......C..........	AGGCATGGGAGTTGATAAAGATGGTGCTTATGG  	
    287394	    32	  87.5	    34	........T..CAT..................	TTTTGATAAACCAAATGATAACGTTTTGCACCAA 	
    287460	    32	  87.5	     0	........T..CAT..................	|                                  	T [287490]
==========	======	======	======	================================	===================================	==================
        21	    32	  95.4	    34	GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT	                                   	       

# Left flank :   TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAACCAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAATAAAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCA
# Right flank :  TGCGATACGTGACTTTACGATGTTGCGACTCCGTCTCGCCCTTTGTGGGTGCGTGGTCCGTATTCTTTGTTTTTCATGAAGGGATAAATTATATCGTATTCATCAAGCTGATTTAAGCTTTTTATGGTGCTATGTCAAATAGATAAAAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCAGATCAGACTTTTCAAAAGAACAAGCACATTATCTCAGCTAGACTGGTGCTTGATAGCTCCTGAGCCCTTGTTTGCTGTAGTTGATAGGACTTTGCTGATGGCCTAGTCAGGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCTGCCCTACTTTAGGTAGAATAGAGGTAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTGTATTTAG

# Questionable array : NO	 Score: 9.00
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT
# Alternate repeat :   GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-7.10,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : NA
//