Array 1 1807979-1807085 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP019711.1 Amedibacterium intestinale strain 9CBEGH2 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1807978	    36	 100.0	    30	....................................	AGTTCTATATCACTCAAGTTATCCCAAGAT	
   1807912	    36	 100.0	    30	....................................	AGTTGTCGATAAAAGGCACATCACAGACCA	
   1807846	    36	 100.0	    30	....................................	GCAAAACCTCTTGAAAGCTATAAAATCAAG	
   1807780	    36	 100.0	    30	....................................	CGCATGAGCAAAGCAAACAAGCTACAGCTA	
   1807714	    36	 100.0	    30	....................................	AATTATGCGGTATTCGATTGTCCGCTTTCC	
   1807648	    36	 100.0	    30	....................................	GTATAATTGTTGATTATTGATGTCTTACGC	
   1807582	    36	 100.0	    30	....................................	CTTTCCACGTATGCCCACTGGTTCAAGGGA	
   1807516	    36	 100.0	    30	....................................	TCTGCAATTGTTGGACAGGTTACCGCATCA	
   1807450	    36	 100.0	    30	....................................	TTTACGTGCTCAACAGGCACGAGCAAGTCA	
   1807384	    36	 100.0	    30	....................................	GATTGCATGCTAGACATGATTAAGACACGT	
   1807318	    36	 100.0	    30	....................................	AATGTACATGGCGGACATAATGCACACACA	
   1807252	    36	 100.0	    30	....................................	CTTCTGGATTTTGTATATCTAATTCTACCA	
   1807186	    36	 100.0	    30	....................................	TTATCCACGCCTCATTATCGCAGGCATTGC	
   1807120	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	 100.0	    30	GTTTTGTTACCATATGGATTTTTGCTAGAATGAAAC	                              	       

# Left flank :   AAAAATCCTTGAAGCATATTTTAGTGATGATTTTCAAAAAGATGAATTTGATTTGAGTTATGAAGATGTTATTTTGTTTCAAATTCATTTGATAAATGAAATTATTGCTCATACAGAGGATAAAGATATGATTATTGTATCGGTAAATATTCCAATTATAACAGATACTATTATTGAAGAAATGAAAAGTACTGGACATAGTTTTTTCTTTATCTTCACGAACAATTATTGTGAAAAAATGAAACTTGATGAAGTTATATTATCAGAGGAAGAATTATATGATTTGGCAGATATAAATTCTATATTTTACGAAATAGAGGAAACATATAATGAAATACAGCAAGTGGAGGTATTAAAAGAAAATATGAAAAAGTTTGTGAAATTGAATTATACATATAAGGCATTCAATGTTATCGATGAACTGACACATTTTTCTAATAAGTAGCGAATCGAATAGGTAGTAATTCTCAAATTACATAAAATATGTTATGATATTTGAG
# Right flank :  TGACGTCCTTGTCGTATTTGCCCTTCAGAGAGGTATACTCCTTTTTATATTTAGTGACTTCTGCCTGTAGCTTTTCGTTTGATCCGTTGTCTTTTTTCAATGTGTCAATTGTGATGTTACCGAATAAAAAGGGAGCTGTTTAGCTCCCTGTAGGCTTATAGCCTTTTTTATCCAACTTTTTCATTAGGAAAGCCTTGCCGACTTCTTCGTCGATTTTGCTTTCAAGCCACTTACGTTTAGTGAGTATTTTTTTCAAGGACTTTTTCTAATTCTTCTGCCTTGTCCTTGCCTATCTCGACATAAAAAGCTTTTTTTCTTTTTTTCGTTCCCTCATTATGAATGTCTGTATATTTCTCTTTAAGCCTCGGTAGGAGTACCGGCCCTACATCTCTTTTAGGAAGTGACGGAAGTACATTATCTCCGTCCTCGAGGCATATTTTATCAATACATTTGTGAATACCAGAATGACGGTCCTATATTCTTCTCTGTTTCTTCGTCCA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGTTACCATATGGATTTTTGCTAGAATGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.77   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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