Array 1 1387585-1382816 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049263.1 Campylobacter concisus strain H16O-S1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1387584 30 100.0 39 .............................. GACGATAATTATCTAGTTACAGAATTAATCTAATTTAGC 1387515 30 100.0 36 .............................. ATTGATTTATCAGCGTAATATCAATAGTTAGCGTAT 1387449 30 100.0 35 .............................. CTGACGCCCTGCGGTTGTCGCTTCATTTTTATTCT 1387384 30 100.0 35 .............................. ACAATTTCTTTCAAAGTGTGGCGTATCAAGAAAAG 1387319 30 100.0 36 .............................. CAAAACTAAGAATACCATCATCTTTTAAGTGCCTTA 1387253 30 100.0 36 .............................. TCTTTTAGGTTTTTGTGACGAAGTTCGTCCGATTTC 1387187 30 100.0 36 .............................. ATTATGGTTCTTTAAACGAATATCGTGTATATCGTT 1387121 30 100.0 35 .............................. TTGCTACTTGTAATGCTGGTGAAAATTTTAATACT 1387056 30 100.0 34 .............................. CCTTGCTGTTTTGCAAAGCTTCTTCAATGCTAAT 1386992 30 100.0 36 .............................. CTGCCTTTGTTGGCACGTATTTGATGTGTTGGATAA 1386926 30 100.0 34 .............................. CCTCTTCTTTAACCTCCGCATCATCAAAATCAAA 1386862 30 100.0 38 .............................. ACAGCGAAGAATACGCCATAAGCAACAAGAACAGCACC 1386794 30 100.0 34 .............................. CTTTGAAATTTGATAGGCTATAAGGAGTAAAAAA 1386730 30 100.0 36 .............................. ACTGCTGGGGCTATTCAGTCTGAAAGCGTGCGTAAA 1386664 30 100.0 38 .............................. CCGTCACCCTTTCCGTCTTCTTTGCCGTTGCCACTATT 1386596 30 100.0 37 .............................. GGTATATGTCCAACCCTAGTATTGTGGAATATAACAT 1386529 30 100.0 35 .............................. TTGTCATTAAAATGCTAATACCAAGACCGACAGCA 1386464 30 100.0 33 .............................. CCCACGACTGGCGGCAACGGAATAGGAGCTGCA 1386401 30 100.0 34 .............................. TCGATGAAGCTAAACGAGCCAAGAGGCAAAATAC 1386337 30 100.0 36 .............................. ATACTGCTACTTCTTTTTCGGCACTACAAAGCGAGC 1386271 30 100.0 35 .............................. TTTCTTGTAATGCAGAATTTGAAAGAGTTTTAAAA 1386206 30 100.0 39 .............................. TCACCAACAAATGGCTGAGGATTTTTGTTGTATTTCCAA 1386137 30 100.0 34 .............................. CCCGTTGGGTCTGTATAATAGGGGCTATTAAGCC 1386073 30 100.0 36 .............................. CAACAAAGCCCTTATACTCGCATACATCATAGCTTT 1386007 30 100.0 36 .............................. TATAAGGAAACAAGCTTATATAAATAGTTAAAGGGG 1385941 30 100.0 36 .............................. ATTTGACAAGAACGCCCAATTTGCAGGGGCGGACGC 1385875 30 100.0 36 .............................. TTATTTGAAGAGTTGCCACTCTCTCCGCTAGAGTTG 1385809 30 100.0 34 .............................. AAAAAGATATAAAAATAGAAATGAACTAAATTTT 1385745 30 100.0 35 .............................. GGATAATCAGAAACAACAAAATGATCAAAAATACC 1385680 30 100.0 37 .............................. GAAAAAGCAAGAGAGCATAAAAGAGATAAGACAATGA 1385613 30 100.0 36 .............................. TTGCCACTCGAGCCGTTATTATTGCCACCGCTAGAA 1385547 30 100.0 36 .............................. TTTGGATCTTCAACACGATGCTTGAAAACAATACTA 1385481 30 100.0 34 .............................. TCCACTCGTCAAACTCGTTTCTAATAAGGTCAAT 1385417 30 100.0 36 .............................. CAGTTAGCTCGTCTGTTTTTATACCGCTTGCATAAG 1385351 30 100.0 35 .............................. AAAAATAATGTGTTATTCATTGCTATTTCTAATCG 1385286 30 100.0 37 .............................. ATTTTCTAGTGTCTTTATAAGTATCAAATTGAATTTA 1385219 30 100.0 34 .............................. CTCAAAGTTTTGTTCCTTTACCAAAATCAAAAGC 1385155 30 100.0 37 .............................. ACGAAAAAATCGTAATTGAATATATCAATAATCTAGC 1385088 30 100.0 39 .............................. TTCTTTATCGTCTGACGATTTTCGAGTTTTACAATTTTC 1385019 30 100.0 37 .............................. TAATGTAAATTTTTTTAACATAAGCCTATGAAAACAA 1384952 30 100.0 35 .............................. GAAAGCGAGCAGTATCACAGCCTAAAAGAGAGAAA 1384887 30 100.0 37 .............................. ACGAAAAAATCGTAATTGAATATATCAATAATCTAGC 1384820 30 100.0 39 .............................. TTCTTTATCGTCTGACGATTTTCGAGTTTTACAATTTTC 1384751 30 100.0 37 .............................. TAATGTAAATTTTTTTAACATAAGCCTATGAAAACAA 1384684 30 100.0 35 .............................. GAAAGCGAGCAGTATCACAGCCTAAAAGAGAGAAA 1384619 30 100.0 37 .............................. ACGAAAAAATCGTAATTGAATATATCAATAATCTAGC 1384552 30 100.0 39 .............................. TTCTTTATCGTCTGACGATTTTCGAGTTTTACAATTTTC 1384483 30 100.0 38 .............................. ATTAAACTTCGATATATTCTTATTAAAGCTAAACTTGC 1384415 30 100.0 34 .............................. TATAAATAATCTTCAAGATATAAAAAATCTTTAA 1384351 30 100.0 35 .............................. ATTAAGCTAATCAAGCGCAATAAATTAAACTTAAT 1384286 30 100.0 36 .............................. ACTAAAACTAAAAGTGAGCTTTTAGACGTAATGGCT 1384220 30 100.0 36 .............................. GAGAGTTTAGCACTCTCAACAATTTGATTTAACTTT 1384154 30 100.0 38 .............................. ACAGCGAAGAATACGCCATAAGCAACTAGAACAGCACC 1384086 30 100.0 33 .............................. AATTAATGATGATACTATATTTGATGTAGAACA 1384023 30 100.0 34 .............................. TATTATGTTAATAATAGCAAAGCAACTAAAGAGA 1383959 30 100.0 36 .............................. ATTCGTCTAAAGTTTTAAACAATTCTAACTTTTCTA 1383893 30 100.0 34 .............................. TATTATGTTAATAATAGCAAAGCAACTAAAGAGA 1383829 30 100.0 34 .............................. AATGCAATTTAATCATTTTCTATAATGCAATTAA 1383765 30 100.0 35 .............................. GTTTGAGTGCAAGGCTTTTATCTCATCATCTTCTA 1383700 30 100.0 36 .............................. GCACAGTGATAGTGTCGCCGTCAGATATTTTTATGA 1383634 30 100.0 38 .............................. GCCCTTTCCAAATTTCAAAAAATGCGTCAAGTATTATG 1383566 30 96.7 35 ..........G................... ACACCTGCGAGGCTAGCAAAATATTCTTTGCTTTT 1383501 30 100.0 35 .............................. TTGTGGCTACTCCCCTCTTTGCCTCTTCAGCCAAA 1383436 30 100.0 34 .............................. TTCTGTATTCCTCTCTATCAAAATCCCAAGTATC 1383372 30 100.0 36 .............................. AATGTCGCCCTGATTTTTATAATGAGAAAATGGGTG 1383306 30 100.0 38 .............................. TATAAATCTGTAAAATAATCATTTACAGATACTTGATA 1383238 30 100.0 35 .............................. ATGATGGAGAGGGTCATTGGCTTGATCCTATTACG 1383173 30 100.0 37 .............................. AAAACAACCTTTTGCTCTACTTCATCGGTAAAGCCAG 1383106 30 100.0 34 .............................. TTGGTTCTCGATGTTTTAGGGGTATTGCTTTAGA 1383042 30 100.0 37 .............................. GCCTTATACATCTCCTCCGCCCAGTCTAGCCATATAT 1382975 30 100.0 34 .............................. TTTGCAACCTAGAAGGGCAAGACTGGGAGAATTT 1382911 30 100.0 36 .............................. CATATATTGGCTTTAACTCTACAAAGACAATCCCTA 1382845 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 73 30 100.0 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCACTAAGCCTACACCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGTCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAACAAGCTTAAAAAGTGCATCTGCGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTAGGGCTTGGCGTATTTATACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCATCAAAAGGCCTATAAATCAGCTTTTTGGTGCT # Right flank : ATATGTTTTCAACTTCATTTTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGATTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGATAAGCAATACTTTAAAAGTGAAGTATCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTCTCTTCATAATACTCTTGTTGCTTTTTATTTTGTGGCTGTGCTTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //