Array 1 804-351 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGU01000097.1 Streptomyces sp. st77 scaffold97.1.size23877, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 803 29 86.2 29 .G....A..A...C............... TCCGACCACCACGTCGTCGCCTGGAGGGT 745 29 96.6 32 .A........................... CTGTCGAGCCCGGGAACTCTTGTTGTCGGCGC 684 29 100.0 32 ............................. GGGTTGAGCCCGCGCTCCCCCGGTCGGCGGCT 623 29 100.0 32 ............................. GCCCAACGCAAGGACGCCCGGCGCCGCCGCCG 562 29 100.0 32 ............................. CGGATCGCCGCGGACATCGAGCGGGGTGTCGA 501 29 96.6 32 ...........A................. CGAGTCGACTCAAGACGGCCGTTCCCTCGTGG 440 29 100.0 32 ............................. GCCGAGGTCGCCGGGATGGTCGTGGTGGCCGA 379 29 93.1 0 ........................G...C | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.6 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CAAAACGGCCGATTTCACCGCCGCGCCCCGAGACGAGCCTGGAGGGAACGGGCCGGGCTCGCATGCTGGTGCGGAACCGGCGGTCGGCGAACTGGTCACTGGAAGCAGCCCCGTGGGCTGCGCAGAAGGCATCGGTGTGCGTGTTGGGCCAGTTGCACGAGTGGGGGTACCGACAGGCTGATGAGGCAGCGGCTGGACTGACGAACCTTCTGGTACACACTGCGGTCGCGGACGGCGGCCGCCGCGTGTCTGTACACCTCGCAGACCAAAACCGGCAGGCGTTGATCGTCGTCCTGTCTCACCAGCCGGGCCTCGCCGTCGCAGACACGGCGGTGCTGCCGGAGCTGACCGAGCTGGGTGCAGTGTCGTGCGGAACGGATACGGCAGAGGACGGGCGCAGAGTGTGGGCGGTCCTCGACCTATAGGTGGATTTTGAGGAGTGCTTGCTGTAGCACGGTGGAGTTCCCGTACAAGGATCAAGCTTTCGCCCGGGGCGAAAC # Right flank : CGCCGAGTGTGGTCCCTTCGATCTCTGGTCCGGTTGTTCGCCGGGTACGTTCAGTGCCCTGACTTCCACGGATAGGTCTGCTCCTGATCGAACCCCCGGCACCATCGGACCGGATTGTCCAAGTACGACCAAACTGGAGTCTGTCCCGGGATCCCGGGCCCTCAACGCTGTGCGCGGTCGTGACCCTTTGCCATGCTGTCAGGCTGCCCCGTCTAACTGATCGTTTCAGAATGCCGTCCTGCGGAGACTCTGACGGCCCATGGAACAATCCCTTCAGCCACGGGCTCAGGGGGGATGACGCCGTATGGAACGGGTTGGGGCTGCACGGGACCTCGTGCTTGGTTACGTCCA # Questionable array : NO Score: 6.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4577-2230 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGU01000097.1 Streptomyces sp. st77 scaffold97.1.size23877, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4576 29 96.6 32 ............................A TCCCGCCTGTCCCCCCGCGCCCCCGGCTCGGC 4515 29 96.6 32 ............................C CTGCCCCCGCCGCCCCGGCTGCCCCCGAGGCC 4454 29 100.0 32 ............................. ATCGGCAAGGGAAGGCCATGCCGGACTCGGAT 4393 29 100.0 32 ............................. TCGACGCCGTGACCCTTGCCGTCGCACTTGCA 4332 29 100.0 32 ............................. CGCGGCTCCTGGGCCTGACTCCGGGCGACCCG 4271 29 100.0 32 ............................. CCCCGCCGGATCATCCGGCGGGGCTTTTCCGT 4210 29 100.0 32 ............................. GACCCCACCTCATGACCACGACCACACCTCCC 4149 29 100.0 32 ............................. CAGTACCGCACGCAGGGGCTCAACGCCCTGGT 4088 29 100.0 32 ............................. CGCGCCTCAGCCACGACGAGACCGAACCGAAC 4027 29 100.0 32 ............................. CCCCCACTCCCGGCACGCACCTTCGACCCCTG 3966 29 100.0 32 ............................. TCCCTGGTGGAGTCGGGCGAGCTGGTCAAGGA 3905 29 100.0 32 ............................. AACTCTGGGCATCAGAACCTCAGCTCGTTGAG 3844 29 100.0 32 ............................. AGACTTGGGGAGGGGACGACCAGAGCGAGCTT 3783 29 100.0 32 ............................. GCGTCCCAGTACCGGAACGCCACACCCAGAAT 3722 29 100.0 32 ............................. CAGGGCATGATCCGGGCCCTCGTGCTCGCCGC 3661 29 100.0 32 ............................. GCGGTGTTCAGGAGCGCCTGCGCCTCGGACGT 3600 29 100.0 32 ............................. CCCGCTCGCGGATACGCCGCTTGATGACCGGA 3539 29 100.0 32 ............................. TCCTGCCACAGGTTGTGGGCGCCGCGCCGCAG 3478 29 100.0 32 ............................. ACCGACGGCATCCTCGCCGCGCCGTCCACGGC 3417 29 100.0 32 ............................. CCGCCGAGGCGGAAGAGAAGTACACAGACGCG 3356 29 100.0 32 ............................. ACCACCGGCATCTTCCAGACCGCCACGGGCGA 3295 29 100.0 32 ............................. GCGACTGCTTCGAGGGCGGTGACGCACACCTC 3234 29 100.0 32 ............................. CCCCCGAAACCACACAGGCGCCCACGCCGAAC 3173 29 100.0 32 ............................. CCCGTAGGACTGGTTAGGCAGGGCGTTGATGC 3112 29 100.0 32 ............................. AACTCGGCGGCCTGCTTGCCGTTCCCGGACTG 3051 29 100.0 32 ............................. AACTCGGCGGCCTGCTTGCCGTTCCCGGACTG 2990 29 100.0 32 ............................. CAGGTCGTACGAGCGTCCGAGATGATCCAGCA 2929 29 100.0 32 ............................. CCTGCCTCCTCGCCCTCGAACTGCACGCCGAC 2868 29 100.0 32 ............................. ATCCCGATCCTGCTGGAGCCGAAGGGCAACGA 2807 29 100.0 32 ............................. CGGTCTCCCGGTCCACGGTCGATGTGAAGGGC 2746 29 100.0 32 ............................. CCGGGGTCGGCCGCGGATGCGATTGCGCCGGG 2685 29 100.0 32 ............................. TACGAGTAGACGGATGAGGATCCGCTGATGCC 2624 29 100.0 32 ............................. AACAGCACCAAGCCCAACCCCGGCACCACCAC 2563 29 100.0 32 ............................. GTCACGGCTGTGATCGGCACCGGAGACACCAC 2502 29 100.0 32 ............................. AAGGGATTCACGATGACCCAGCACAGCGACGG 2441 29 100.0 32 ............................. GAGGTGCGGTTGCCGGTGTTGCCGTTGCCGGC 2380 29 100.0 32 ............................. CAGCTCCGCGAGTGCCGCGTCACCGGCTGGTC 2319 29 100.0 32 ............................. TGCGGCGACGCACCCGTACGAACCCTGACCTT 2258 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.7 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GTGTTGACGTACGCCGGATCGTCACGAACCGGAGCGTAGAGCAGGGGAACCTGCGCTTGAAAAGGGGGAGAAATCTTGCCGATGTCATGCAACCCCGCCCAGAACGAAACCACAGAGCGGGTCTCGTCCAGGCCCAAGCCGAGCGCACCAGCAACAGCCAACTTCGTACCATCGCCCACTACCGCATCCCACAACTCCTGGAACACGGCACTGGTATCCAGGAGATGGCACACCACCGGATACGGACGCGACAGCCCGCTCTCCTTCCCCCATAACCGGCCATCCAGAAAACAGCGTCCCGACACCCCAGCCTCGCCGCCCTTCAGCATGCCTACAGAGGTAGCACCCCTCACTGACAACGACCCCGAATCGCCGAAGATGGCGCCGGAACGCGAGCGCGCACTTACACTCGCTGCGCGACGGCGACGAAACGGAAGTCATGCTCCACAACGGTCAGCAAAGAGATGGCAAAGCCACTCAGTAAGCGCAGGTCGCGAAGG # Right flank : GAGAAGCTGGTCACCGGGCAGTTCTCCTCGGCTTGCGGGCCGCCGTGCCGTACACAGCGGCCCAGGGGCGTTGGTTCGGCAGGTGGCACACGCCGTCGATCTCGCGGGGCGTCACGGTCTAGGTGAACAGGGGGACGTGATCTTGAGATCATCATCCAGATCGTCAATCCGTCGCTGCTCGACGACCTTCGCGAGCAGCAGAACACCGGGAGCCCTTCATGACCGACGCCTTGGTGGCCTTCCTCCGGGCGCGGCTCGACGAGCAGCTGGAGAAGGCACGTTTCGCTAGCAGCACGGTGGCTAGGGCCCCCGAGCGGTTCGGTGTAGATCCCGAGCAGGCCGCGGCGCATGCCCGGTTCTCCGTCGCCACCGCCGAGGTGCACCTCGCACTCCTGGAGGACACTGTCATCCCGCACCTGGGAGCAGGTGGGGCAGCCGACCGGACTGCTGAGTACCAGTTGCGGCTCCTCGCCGCCCCCTACGTCGAGCACAAGGACTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 14232-14990 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTGU01000097.1 Streptomyces sp. st77 scaffold97.1.size23877, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14232 29 100.0 33 ............................. GCCACACGTGCCCCGTGACCGCGTCGGAAGGTG 14294 29 100.0 32 ............................. CGATGCGTTGAGGGGGCACAGCACGGTGAAGC 14355 29 100.0 32 ............................. GAGGTGCGGCCGTGCTGCTGGACATGGGGCAG 14416 29 100.0 32 ............................. TGCGAGGATGCCCGCGCTGCCGGGTTGCGGAA 14477 29 100.0 32 ............................. CTCGGCAAGACCCTGCGGTCCGGACCGAGCCA 14538 29 100.0 32 ............................. AAGACCGCGAGCAGGCGCTACTGGTGGGTCCT 14599 29 100.0 32 ............................. GTGAAGGTCGAGCGCGGGTCGAAGGAGAAGCA 14660 29 100.0 32 ............................. ATCGCCAAGGCGATGGACAAGGCGATCCGGAA 14721 29 100.0 32 ............................. ACGCCCCACACGTACCACCGGTCACACCCACC 14782 29 100.0 32 ............................. GTCCGCGGAGTGCACACCGGGCCGGTTACGGG 14843 29 100.0 32 ............................. ACCGACGAATGCCCCACGCTCTACGAGGACGT 14904 27 82.8 32 ...T......T..--............T. ATCTGCGGGCAGAGGGTCACGTTGTTGACGTA 14963 28 72.4 0 .............CTCT..G.A..-...T | ========== ====== ====== ====== ============================= ================================= ================== 13 29 96.6 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCACGCATCGTCACCGACATTCAGCAACTCCTCGATCCCGATCACACCTACGAAGCCCCCGACCCGGCGGAGCAGATGGTCGACCTCTGGGATCCAGTGGCCGGCTCCGTACCCGCTGGCGTCAATCACGGACTCCAGCCGTGACCCGCCCCACGGAAGTACAACGGCCATGTCCTCAATGATCGTCATTTCAGCCACTGCCGTACCCGACCACCTTCGAGGAGCCCTCACCAGGTGGCTTCTCGAAGTCACACCAGAGCTCTACGTCGGCACCGTCTCCGCCAAAGTCCGCGACGAACTCTGGACAGCCGTCACCGCCTGCACCGACGACGGCCTCGCAGTCCTCGCACACCCCGCCGACAACGAACAAGGCTTCCAACTTCATACAGCAGGAAAGCGTCGCCGTGAGCCCATCGACTTCGACGGGCTCACCCTGATCGCCTTTCAACGAGAAGGTCAAGAAATGGCAAAGCCGCTCTAACGGCCCAGGTCGCGAAGGG # Right flank : TCGCCCGAGATCACACCTGAGGGCTGTTCTGTAGTCCTGGTGGATCAGCGTGCGCGTCAGATGCGGTGCATCGTAATGCCGTAGGGGCGTTCGCGTACTGGATGATCCCGGGCGCGGAGAACGCGGTGAGGTGTCGTAGCTGTTGTGGTGCGCCCGCCAGGGGTTACGGGGCAGTCCGAAGGGCTTCGAGCAGGCGCTCGTACGTCCGCTTTGGTCGCAGGTCCGTGTCCCATGGCAGGGTATCGGCGGGGCGTGGGGGATAGATCTTGGTGTCGGCGGTGGAGCCGTACCGGTCGGTGAATCCCCAGGTGGAGAATGATGTGCAGTTCGGCTCCTCCAGGCAGACTCGCAGCTTGCCTGCCATCTCGTCAGCCTGGGTCTCTCGGCTGTTTTTCTTGTCCTCAGCTATAGGTACGTCCATCTCCGACACTCGCGCCTGAACCCCGAGTTCCGCCAGATCCTGGACACGGCTGCGGAAGGTCTCCGGGGCGGTGCGGTCT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //