Array 1 5316-1677 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRGU010000009.1 Porphyromonas levii strain DD20 JD33_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 5315 30 100.0 35 .............................. CATTTTTATTCGCTCACCCTCTATATCCTTTTGCT 5250 30 100.0 35 .............................. AGCTGACTACGCTGGTAAATAGCACATCGCACCTC 5185 30 100.0 37 .............................. GCTCTTGCCCTGATACTGCCCGCTCTTATCTATAGAG 5118 30 100.0 36 .............................. GAGTATTATGCTGTAAAAACGTCAGGTGGTAAAAGA 5052 30 100.0 34 .............................. GCTGAAGGCTTATCGCATAAGTTTTAATAACGTA 4988 30 100.0 36 .............................. GCAAAAAGCCTCTGGGGATAATCTCTCTCCGAGTGT 4922 30 100.0 35 .............................. TACCTCGATAGGTTCGTACAAAATGGAGAGATATA 4857 30 100.0 36 .............................. TTATCTGGGTCTCGTGCGTCTTTAGTACGTCAAGTT 4791 30 100.0 34 .............................. AACGGCGGATATTAGTATCAATGCCCACACACCT 4727 30 100.0 36 .............................. TCTGAATCTTACCCGCCCTCGTTAGCTCCTGAATTA 4661 30 100.0 37 .............................. TGAATGCGTACTTGAATGCTACGCCACTGAGTGCACT 4594 30 100.0 36 .............................. GCAATTCGGTGATAGATAGCGGCACCTCAAATGTTA 4528 30 100.0 37 .............................. TTGATACCTAATTGCCAAACGTACATTAGGCTGCATT 4461 30 100.0 35 .............................. GAGGATGGGTGGGTGCGTTTATTCAAAAAAAGAAA 4396 30 100.0 37 .............................. TTTTTGATTATCTTTCTTCCTTATTATTCTATCATCC 4329 30 100.0 35 .............................. AGTGGGTGTTTGCTCAAGCCCCTTGCTCTAAGGTT 4264 30 100.0 35 .............................. ATAGACGTCCGTGTTTGATAGCATCGTTTGGTACT 4199 30 100.0 36 .............................. GTCTATTCCCCTCCACCTCTGCTTCACCCAAATCGG 4133 30 100.0 36 .............................. GTCATTTTAGTTAGGCGGTATACGGTTAGAGCTTGC 4067 30 100.0 36 .............................. AGAGTGAATATATCACACTTGCCCCTATCTCTGTTT 4001 30 100.0 35 .............................. GTCTATACCAAATTGTTCCCTAACCTTGTCGGTTA 3936 30 100.0 35 .............................. GTGCTATCTGTTACGCTAAAACCCTGCTTGCCGTC 3871 30 100.0 35 .............................. AGCAAAGTTTGTCTTCTGGGGCGATTTTATCATCG 3806 30 100.0 36 .............................. ACGATAACGAAGAATAAGCGCAACAACAAGACGTAC 3740 30 100.0 35 .............................. AGATAAAAGACACGGTGAGAGGTAACGGCACCTCT 3675 30 100.0 35 .............................. AAGTTGGTCTTGATGCTTATTGTGTGCTGACCCTT 3610 30 100.0 37 .............................. TAAGTATATATAAATGTATTCGTCAATCCAATGCCGT 3543 30 100.0 36 .............................. AGGCTATAACCTTTTTACAGCAACCCACCAGCACCG 3477 30 100.0 35 .............................. ATGGAATGTCCGTTACCAACCCTTTAAGGGATTTA 3412 30 100.0 34 .............................. CTATGAGTACCGCTACGAGCTTGGTGGTGCGATG 3348 30 100.0 36 .............................. CCTACATCTACGACCGCTACGGCATCCCTAAGCCAG 3282 30 100.0 37 .............................. GAAGGAGATACGATTCCGTAACAACCTCGTGCATCTG 3215 30 100.0 36 .............................. ATAGAGCCTTGAGCATAACCTCTACAGCTCTAACCG 3149 30 100.0 36 .............................. TCTCGCTTTTTACATAGTAGTAGCTATTACCCTCGA 3083 30 100.0 35 .............................. TAATGACGGAGCAGACCAACCGACTACTGCGCATT 3018 30 100.0 35 .............................. CCAGCTGCCGAGGGGTAATAACGCTCTCAAAGAGG 2953 30 100.0 36 .............................. TAGAATAGCCTCCTCCTGAAACCGTTTCGTTAACGA 2887 30 100.0 34 .............................. AAGAGAGTGGCGCAAAGTACATGGAGTGACGAGA 2823 30 100.0 36 .............................. TAGCTCTTATCCATCTTCGCGAGCTCCTTCTGCAGC 2757 30 100.0 36 .............................. TGATTATGTTTTGTGACTCCCTCGCCCCCTTTCTCA 2691 30 100.0 34 .............................. CTCGTTGCTCTCTGTGCTGCTCTCTTATATCCTC 2627 30 100.0 36 .............................. TCAGGAAACAAAGAGCCTTGCACAAATCAACCACGT 2561 30 100.0 35 .............................. TAGACAATACCTTCTTACTCATAGCTTCAAAAATT 2496 30 100.0 36 .............................. GCTCTGTACGCAAACATCTTCGTTGAAGTCGCTAAA 2430 30 100.0 36 .............................. GTGAGAACACGCATCAATCTGCCACCTCCCAAGGCT 2364 30 100.0 36 .............................. CATAAGAGTTAAGAGGGATATCAATAGGCTTATCAG 2298 30 100.0 34 .............................. TGTGATAGGTACGGGTCAATTAGCATGTCATCGT 2234 30 100.0 37 .............................. ATTGTCGTGACTCCAAAGCATGACGGGATTTTTGAGG 2167 30 100.0 36 .............................. ACGTTAATCATTATGCCACGCATGTAGAACTTATCC 2101 30 100.0 36 .............................. AATGAGTATGCGAATGGCGTCTCCGTCAAATCAAAT 2035 30 100.0 36 .............................. CATAGAGGTACAAAAGCGTGTCAATTACCTCTACAA 1969 30 100.0 35 .............................. CTTATACTTCTTTGGGTCGCTGCTGTCCGCTGGCA 1904 30 100.0 37 .............................. GATGTAGAGAGACTTCTATTTGAATACGATTACAAAA 1837 30 100.0 36 .............................. ATCGCAAGTACCTGAGTATCCACACTCTCATCCACG 1771 30 100.0 35 .............................. TTTTATCCTCTCGACTTGAGTTCTTGTTGAAAAAA 1706 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 56 30 100.0 36 CTGTTAATCGTACCATACTGGAATTGAAAC # Left flank : TAATATTTTCATCAAGACAAGAGGGGTGGTTAGACAAAGAGATTATGGGAATTGAGAAAGCATCTACCGATAATTTCTTGTGAGTATTTTCCTATTTCGAATTACACGCCAATGCGTAAGGATGATAGAGATCATAGACATTTCGAAAACTAATAATATCTTTGTTTGGGTCGCATCAGACTAATAGATGTAAATCATGGTTAGCATTTTAGTGCTCTGTAGGACAGTTCCCATATCATACAATATGTGGTGCGCATAAATTGCTCTATAATGATGGGTTATTCTCTAAATGTCTGTCGATACTGGTGTTCACTAGTATTTTAGACGGTCTATGAAAATAGGAGGAATATTATGTTATTGATAATCAGTAGAATGGACTGTTGTCGTAGGTGCACTCTTATTATACGATTAGGGTTCGACGACATCTTCCAAGCAAAAAGTGCCAAATAAATTTTCTAACAGACTTGTAACCAATGATATATTATAGTAAATTTGACGGC # Right flank : TATTCGTCATCATCACGCACCTTATGTTCGATAGTTCTGAGAGATGGGGGGATTTGAGAGAGGGGGAGTGGTCGAATTCTCTAGCGCGAGCGGGGAAATTTATCTCTAGGAATAAAAATATTTATTCCTAGAGATAAATGTTTTTATTTGTGCAGAAAAGTAAATTTATTCCTAGGGATAAATTTGATGGTGAAGTAGACTATTTTTTTGCTGCTGTATATCAAGCGCTTGGGTGAAGGGTATTGCGCTGTAAATTGGTATATTTGTACGCTAATGTATAGGTGTGTATGAAGCTAAGGACTGAGGATTTAGTAAAGAAATATAAGAGTCGTACGGTGGTGAACCATGTCTCTATCGAGGTGGAGCAAGGTGAGATCGTGGGGCTTCTGGGGCCTAATGGCGCTGGGAAGACGACTACTTTCTATATGACGGTGGGGTTGGTACAACCCAATAATGGTCGGATTTTCTTGGATAATCGAGAGATTACCAAGGAGCCAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTAATCGTACCATACTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //