Array 1 46896-41041 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAGJ01000031.1 Acinetobacter baumannii strain Aci00866 isolate Aci00866 Aci00866-merged_contig_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 46895 30 96.7 30 .............................A CTGAAAGAGTAACTAACTGTTTAAAGAAAC 46835 30 96.7 30 .............................A TTCCTATTTATTTTGAGCCTAATACACCAA 46775 30 100.0 30 .............................. TCCAACGAAATTATGACGCTGACAAGTCTC 46715 30 100.0 30 .............................. CACAAGACCATACTCACGAATAAATTGTTT 46655 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 46595 30 96.7 31 .............................G ATTCCGAATTATTTGCGGATGAGAGCAGTAA 46534 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 46474 30 96.7 30 ............................A. CGTCACAGCGCACTGGTTACTTAAAACAGG 46414 30 96.7 30 ............................A. CAACAACTTTATTAGCCTTCACAAGACCAT 46354 30 93.3 30 ............................GA TACGGGTAAACCGTATGAATGGGTTGATTT 46294 30 93.3 30 ............................AA AGATATTACTGGTGTATAGAGCTGAAGATT 46234 30 96.7 30 .............................A ATTCACTTGATGCAGGTGAATCAATATTAA 46174 30 100.0 30 .............................. TAGATACAGGCGTTGATTCTGCAAAAGTGG 46114 30 96.7 30 ............................G. TACCCAACCCTTTATCAATCTCTCGACCAA 46054 30 93.3 30 ............................AG GGTGCGCTTGCACGTCAAGAATATCTTGGT 45994 30 93.3 30 ............................AA CGAGATACTGTTTCAGGAGATTCACCCAAA 45934 30 100.0 30 .............................. TTTTTAAGTGTTTCATCCACAACATCATAA 45874 30 93.3 30 ............................AC CATCAATCGTGAAGCATCAAGGCGATAAAG 45814 30 96.7 30 .............................G CAAGACAGCTATATAGAACAGTTGGAAAAT 45754 30 96.7 30 ............................A. AACTTGCTTGTACGTTTCTAATCTTCAGTT 45694 30 93.3 30 ............................GG TGGAAAATGTACATAGACATTGCACCGAGA 45634 30 93.3 30 ............................CC CAAAGGCTCAAGAGTTGAGCGCGTCAACTC 45574 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 45514 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 45454 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 45394 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 45334 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 45274 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 45214 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 45154 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 45094 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 45034 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 44974 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 44914 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 44854 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 44794 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 44734 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 44674 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 44614 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 44554 30 96.7 30 .............................A ACTTAGACTGAATATCTGATGCTAAAGATT 44494 30 93.3 30 ............................AG CCGGTGTTGATCTGATATGCGTTAGCCATT 44434 30 96.7 30 ............................A. ACGCGCCAAACATGAATGGGTTTAAAACGT 44374 30 100.0 30 .............................. TGTGCCTCAATATGATTTCAAATATGGTTT 44314 30 93.3 30 ............................GC CAGGGGCAACATACCGCGCTAACGTTAGTG 44254 30 93.3 30 ............................GC AGTATTGACTGTCGGACTTGTGACAACCTG 44194 30 93.3 30 ............................GA CAGGAACCGTCACTGAAAGCGCACAGGCTC 44134 30 100.0 30 .............................. GTAACAACTTTAATGGAGAAGCCTTAATCT 44074 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 44014 30 96.7 30 .............................C TTGTTATTTCTGGTAATAAATATCAGAACA 43954 30 96.7 30 .............................C AAATCTAAGCCATGCTCATTAGGCATAGGT 43894 30 96.7 30 ............................A. CCTGTCTCTTGGTCAATCTTGGCACGTAGG 43834 30 96.7 30 ............................A. TACCGACTGATTGTTGAGTGGCAATGTTAA 43774 30 100.0 30 .............................. ACACATGAAGTCAGCAAATGCCACCATGTT 43714 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 43654 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 43594 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 43534 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 43474 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 43414 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 43354 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 43294 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 43234 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 43174 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 43114 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 43054 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 42993 30 96.7 30 .............................G ATGATTGGATAGAGATTCATGCGTTAGATT 42933 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 42873 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 42813 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 42753 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 42693 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 42633 30 96.7 30 ............................A. GCTCTCAATAATTCGCAAGTAAAAGTGGAT 42573 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 42512 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 42451 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 42391 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 42331 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 42271 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 42211 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 42151 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 42091 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 42031 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 41971 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 41911 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTATGAAT 41851 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 41791 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 41731 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 41671 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 41611 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 41551 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 41491 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 41430 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 41370 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 41310 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 41250 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 41190 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 41130 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 41070 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 98 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //