Array 1 193593-193393 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWVR010000002.1 Klebsiella pneumoniae strain ZKP144 isolate ZKP144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 193592 20 69.0 32 ---------.................... AGTACCGAGATGGCGATACACATCTTTTCTAT 193540 29 100.0 32 ............................. CTACCGCACAGCGGAATCATTCGGCTTGGTTC 193479 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 193421 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 4 29 86.2 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : | # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCTTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.31, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 813-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWVR010000004.1 Klebsiella pneumoniae strain ZKP144 isolate ZKP144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 812 29 100.0 32 ............................. TTCTTCCAGAGTTGATTTGGCATCACACAAAC 751 29 100.0 32 ............................. GACCGTGCCAGTGGTACCGCCCAGAAGTAGCA 690 29 100.0 32 ............................. GTCAGGGGATTACCATCCCTGACTTTGTACTC 629 29 100.0 32 ............................. TGGATTGACGATCGGGCGCAGGAAATTATCGA 568 29 100.0 32 ............................. CAGGCGGAACCGGTGATAGATTTCGCGGGTTA 507 29 100.0 32 ............................. TCGGGGCGGCTCCGGCGATACGTACATCACCA 446 29 100.0 32 ............................. GCATACGCGCCCGGCTTTTTGGCTTCGAGATC 385 29 100.0 32 ............................. ATATTGGTGGGGATGAGATTCGCGAACTGGCC 324 29 100.0 32 ............................. AAAAGTTAGACGTCGCATCAATGAGCGCTGCC 263 29 100.0 32 ............................. GGCTGGCTCGTTCTCGACCGTCGCGCAGTTAA 202 29 100.0 32 ............................. CCGTCTTCGTTGAGCCAGGTTTCCGATGCGAT 141 29 100.0 32 ............................. GGTGAATGGTTTAAAAAGAATAGCCAGGGCAA 80 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATCACCGCCATTAAAAGCTGATCGAGAGTACCGACACCAACTTCAGCGAGTAGCGCTTTTTTGCGGGAATCAGCGAACCAGATGTGGCATTCACTGGCGGCGTTGCGATCGTCTTGCGCGTAATCTTCTGCCGTCTCATTGACTGGCTGCCAGATGGATTGCCGGAAAGTTTCTGACATTTCTCTTTCGCCATGAGCCAGTATAAGCGACGGCCTGGCATCATCGGCGAACAGGGCACGGTAAGCCGCCGACAAGCGTTTATACATAGCATTCGCGGTTGCCATGGTCGGCAGTCCAACGTAAAGTCCATGGCCTTTACCTGCAGACATTAAACGATGAGTCAGAATCAGTGCTGCTTCTGTTTTACCAGCTCCGGTTACGTCTTCCAGAATAATGAGTTGCGGGCCTGGCGATGAGATATCCAGAGTATTAGCTCGCTGCTGGAGCGGAGTGAGCGTATGGATAAAGGGAAACAGAGCTTGATGATTATGATAAAAGC # Right flank : GTGGTAGCCAGAGAGCAGCCTGAACACCTGCGCGTGTTCCCCGCGCCAGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //