Array 1 1727101-1727495 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058693.1 Streptomyces sp. Rer75 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1727101 29 96.6 32 ............................A TCCGGGGGCGGGGTGTCGGTGTCGGGCTCTAC 1727162 29 100.0 32 ............................. CGTGGGCGGACGGCGTACGCGGCGCGGACGGC 1727223 29 93.1 32 ...........A................C TCGTACAGGGCCTGGCTCGGAGTCCGGTTCGC 1727284 29 100.0 32 ............................. GGCGGCGAGTGCGGCGACCCTGCCGAGGGCCA 1727345 29 100.0 32 ............................. TCCTTCTTGCGCACGGTCATCCCTCCTCGTAG 1727406 29 93.1 32 .............C.....C......... CCGCCGACCCCGCCGTCGTCCTCGACGTACAC 1727467 29 93.1 0 .............C..T............ | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTCGGCCCCGCGTTCGCGGGGGTTGCTCG # Left flank : GATCATGGACCGGGTGGCGGGGCGACCCCGCCCCTGGGCATCGCCATCATCGCGTTCCACCCGGAAGCCGAGCAGTTGGAGGCGCGCCCGAGTTCGGCCGCGACCACCGAAGGCCAACATCACCGTCGGCAGACCGCACAAGAGCACGCTTCTCCCCGACGAGTCACGACTCGAACCCCAGGCATCTGTGCCTCTTCTGTCACGCGAACACCCGATGGTGCGCTACCAATAAGGAGCAGTGAATGCGTACGGAAGCAGGCGGCGTTCACCTGCTGCGGACTACCCTCTCGTTGGTCAGCATGTTTGAAGGCAGCACTCGTGCCACAGGGTGCCTACAACGATCACCGCGCCCCGGGGTCTCACCCATGAGAGGAACCGTCAGGATGATCACGATGGCTTATGCCTTCTTCCGGGCTGGGAGCCGGCACCTCGATGTGCGCACCGGAGCCCAAGTGAATGAAAACAGCGTTGATCGCAGATAGAGCCCCAGGTCAACAAGT # Right flank : GCGCATGGCTTGGCTGTACGAGATCGAACGCGCCCTTCAACAACGCCGGTTCCTGGGAAGTTCATTACCGGGGCCTCCTCTTTACCAGCAGAAGCCAGCCTGGCACGCCCCCTGCAACCCGGCCACGGCGTTGGTGACGAGGCTCAGGTTTGGCCGTCTGCGACAGGCTCTGGCAGACCTCATGCTGACCCAATGCTGACTTTCCTGACTGGCCGCCAGAGTTACTGGCCGACGCCGCGCTGCGCTGCACGAACGGCGAGCCGTACGCGCTGATCGACCACTACGCCGGCGACGGGTACGCCACCGCGCCCGTGCCGAATTCCCACCGCTGGCCGCCATGTGAACGCAGACAGGCCCGCCGCGCGCGGGATTCAGCGGTCCGGTTCTCCGTCTTCTGCCTCCTTGAGTTGTTCGTCCGGGACGACGTGCACGGCGGCTTCCTCCGCTCCAGCGGCACCCGCGTCGATGCCCTCGTCCCTGGCGAGGACTTCCTTGGTGGC # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGTTCGCGGGGGTTGCTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2150443-2150292 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058693.1 Streptomyces sp. Rer75 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2150442 29 100.0 32 ............................. CCCCCCGTCGAGACGAAGGTGAAGGCGGCGAC 2150381 29 100.0 32 ............................. CTCGAGCCGGATCTCACCAAGATGATTTACGG 2150320 29 96.6 0 .....T....................... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGGTCCCCACCGGCGTGGGGGTGTTCCG # Left flank : GGGTGGGTCACGCAACTCGCCCGCAACCTGCTCATGGATCTTGAGGACAGAACTGGGTGCTTCCGGTTCCTCATCCGGGACCGGGACAGCAAGTTCACCTCCGCGTTCGACGCCGTCTTCGCCAGCAACGGCACAGCCGTCATCCCAACCACGCCGCAAAGCCCACGGTCCAACGCGTTCGCCGAACGATGGATACGCACAGCCCGCGCAGAATGCACCGACCGCCTCCTCATCACCGGCGAACGACACCTACGTACGGTCCTCACCAGGTACGCCGAGCACTACAACACTGGACGAGCTCACCGCAGCCTCAACCTACGAGCCCCAGATGACGACCCGAACATCATCCCCCTGCCCGCCGCCACGGTCAGGCGCAAGCAAGTACTCGGCGGACTGCTCAACGAGTACCACACCACGCCACACCGACCGCCTCACCATCCACAGGAAACGCCCAGCTCAGCAGCCTGATCGGAATATTGACACCCTTCAGGCCTGAACGA # Right flank : GGCCGAGGCTCGGCGGAAGGAGTACGACCGCCTCCGGCACGGCGTTCCGGATCCCCGGCAATGACGAGCTGGCTCTAGGAGTTGTCGTCAAAATGTCACGCCCACATCAGGAGCGATGCGAGGGTGACGGCTGCTTGGTAGGACTCGGCGGTCTTGTCGTAGCGGGTGGCGATGCCACGCCACTGTTTGAGGCGGTTGAAGCACCGTTCGACGACGTTGCGCCGCTTGTAGACCTGCTTGTCGAAGGCTGGCGGACGTCCGCCATGGCTGCCGCGTCGGAGCCGGTTGCGGATCTGGTCGGACCGTTCCGGGATGGTGTGCCGGATGCTCCGTCGCCGCAGGCAGGTGCGTATGGCCTTGGAGCTGTAGCCCTTGTCGCCTATGACGTTGGCAGGTCGGATCCGGGGCCTTCCTGGCCCGATCCGGGGCACCCGGATCGCCTCCATTACGGCCGCGAACTGGGTGCAGTCGTTGGTGTTCCCGCCGGTGATGGTGAAGGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCACCGGCGTGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACCGCGTGGGGGTGTTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 8329074-8328622 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058693.1 Streptomyces sp. Rer75 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8329073 29 100.0 32 ............................. ACGCTGGTCGTCCTCGCCGAGCGCCGCGCCAA 8329012 29 96.6 32 .............T............... TTGTAGGCGGCGGCCTTGACCTTCATCCGGGT 8328951 29 100.0 32 ............................. ACGAAGTGGAATGAGGAGACCTCTGCATGACG 8328890 29 89.7 32 ............T....A.......C... ACAGGGTGTAACACTCAAGGCACGTCAGCTGT 8328829 29 89.7 32 ...........G.T..T............ CTGAACCACGCTGGGCTGCTGCCGCTCACCCT 8328768 27 89.7 32 .......T...............--.... CGCCCTTTCGCGTTCGCGTAAATGGCGCCGCG 8328709 29 89.7 32 ................T.....A.....T GGCAAGGTCGTAACCGGCGCCATCGTGCAAAC 8328648 27 82.8 0 .......T........T...-...A-... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 92.3 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AAGCCCTCGACCACGTCCTGATCATGAATGAGGCCCACGCGCGCCACGTCCTCGCCGCCTACGAGCGGCACTACAACGAGCACCGACCTCATCAGGCCCGCTGCCAGCTCCCACCCGACGCTCACGAACAACCCGCCGCGGTGTATGACCTCCACATCCACAAAGTCCTGCGCACCCGGATCCTCGGCGGCCTCATCAACGAATACAGACATGCGGCATGACGTGCAGCGATGATTTTTCGAGCGGCACAGGATGGCCCGGAGGCTGCTCTGTGGGGCCGTGTTCGTTCTCGAAGGTGTCGACGGAGAGGATGCACTTCGTGTTGTTCGCCCCAGCGGCAGGGCGCTATTGGCTTGTCGTCATGTGAAGTGCTTTGGGTGGGGCGAAGCATGCACGGTGTGGATCGCTGAAGAGGCGGAATGGGTATGTCTGAAATGCCGGACTTTGGGAAAGTGCTTTGCGTGCTGCCTACTGGCAGGTAGACATGCAGGTCAGACAGT # Right flank : TCAAACCTTGGTACGACGCGCGTCCTCTCGCCCTGTTCTCTGGTGGTCCTCGGCAAGGTCCGCGGATACCTGCCTACCCGAACTCCTCGCTGCATTCGCGGCTCGCCGTTGCGTACGACTGTGGACAGGACGGTCCGCACGTTGTTTCCGCCGCTGCCGTATCCTCCCTGTGTGGCAACGGTCGATCGTGAATGGGCTTATACGCTGGCGGGCGAGCTGCTGGAGGAGAGCCTGCCGCGTAGATGGGCGCATACGCAGGGAGTTGCGGTTCGCGCTCAGATGCTGGCGCCGCTGGTCGGTAGCAGCGCCGAGATTCTGGAGTCTGCGGCCGTGCTGCACGACATCGGGTACGCGTCGGCGCTTGTCGATACCGGGTTTCATCCGCTTGATGGTGCGCGGTACCTCCGGGACGTGCACGTGCTGGACGAGCGCGTCGTCCGGCTGGTGGCGAACCACACGTACGCGTTGCTGGAGGCCGAAGAGCGCAGGCTCCAGGAGGA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //