Array 1 61887-59800 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAPAW010000006.1 Streptococcus sp. IMAU 99161 scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 61886 32 100.0 36 ................................ ATCAACTTGCAACAAACTGAAATTCTAAAAGCCACA 61818 32 100.0 38 ................................ CCAGTTAGAGGAGGGCTACTCGATAGAAGAACAGAAAG 61748 32 100.0 35 ................................ AAATACTTCCCCTAAATCCTACTAGCTCCAATCAG 61681 32 100.0 35 ................................ TGGTTTGACACTTCTAACGAAGCAATGAAACGCTT 61614 32 100.0 34 ................................ TTTATACGCTTTTAGATAATCGAGATAAAACGAT 61548 32 100.0 35 ................................ ACAATCCCGAAAAAGCAGTTGTTGGTAAAGCTACA 61481 32 100.0 35 ................................ AATAAAACAACGAAAACATACATGATCGAGCTCGA 61414 32 100.0 34 ................................ TTAAAAGGACGGCGTTTCGATGAGAACGCGAATC 61348 32 100.0 34 ................................ CCGTGAACGATCCAGCGGTTGCAATCCTTGGGAA 61282 32 100.0 35 ................................ AAAAGATGCCATCTATAAATCTGAGATGAACAAGG 61215 32 100.0 33 ................................ AAGAAAACGCCTATGCTGGTCAGTCCAAACGGT 61150 32 100.0 35 ................................ ATCTAAAGATAAATCGGTGGCTGAAAAATTAAGGA 61083 32 96.9 33 ..T............................. CCGTCTGATAAGTCAACAGTTATCAAGGTGACA 61018 32 100.0 34 ................................ TTTTAAAAACGCTTCGTGTGCTTCTTGGCTCTCG 60952 32 100.0 34 ................................ CCTCTCAAGTTGAGCGAATACGGACAACAAACCT 60886 32 100.0 34 ................................ TTATCGAATCCCCCTTGTATCTTCTGAAACATGG 60820 32 100.0 34 ................................ TAAAATTGCTTTTAGATAGTTAAAACTAGTTGAA 60754 32 100.0 34 ................................ TTGTGTGTTAGGTAATACTTATAGGGAAGCCTAT 60688 32 100.0 35 ................................ ACAATAGAAGAACTAATGGAAACATTATCTTGTAG 60621 32 100.0 33 ................................ AAGATAGTATATCATATCCTTAAATCGCATCTC 60556 32 100.0 34 ................................ TTGAGGTAGGTCAAAAGTAACCTTATCACCTTCA 60490 32 100.0 33 ................................ TTATAAAAAGGAATTAAGCAACTATCACTTGAT 60425 32 100.0 34 ................................ ACAATCTGCCAGCCTAAATTAGATGCCCATTCTC 60359 32 100.0 36 ................................ GACAAAAACAGCATCATACCTCCAGAAATGAAGAAC 60291 32 100.0 33 ................................ AAATTCAACACAGGCGATTTTGACAACGGTTAT 60226 32 100.0 33 ................................ AATCTTATCTGTCCAAGGCTTACGGTCGAGTAC 60161 32 100.0 33 ................................ ATTGTCTTTCTCCTCCATTTCTGCTAAAATAGA 60096 32 100.0 34 ................................ ACGGACGAAACAGGATTGATCGGTGTGGCGCGTG 60030 32 100.0 35 ................................ TTTTAAGACTTGCGACATGATACCGGAACAATCAC 59963 32 100.0 34 ................................ AATCTTGGCTAGGTTTTTCATAGCCTAAAGCACG 59897 32 100.0 34 ................................ AATTGCTTTAAGTGTTTCAGTTTTAGCGAATTTC 59831 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 32 32 99.9 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : AAAAGCTATTCGTGGGGAATTAGATTCATATCCACCGTTTATGATATAGGAGTTTACATATGATGGTACTGGTGACATATGATGTCAATACTGAAACAGCAAAAGGAAGGAAACGTCTGCGCCATGTTGCAAAACTGTGCGTTGATTATGGCCAACGTGTTCAAAATTCAGTATTTGAATGTTCAGTTGCTCCTGCAGAATTTGTAGAAATCAAGTCTAAGTTATTAGATATTATTGATCCTGATTCTGATAGTATTCGATTTTATTTTCTTGGAAAAAATTGGCAAAATCGAGTGGAGACTATTGGACGAGATACAAGTTATGATCCTGATATAGGAGTATTAATACTTTAAAATAAGGAACGCGAATCGAAGTTGCACATAAAAGTGCAGGAGTTTCGCGCAAAAAGACTAGAAAAATTAATGGCAAAAATGAATTTAAGGGAATAATAATTCCTTGGTATTAATCAATTTTAGCCATAAACGGTGCTACTTTGCGCT # Right flank : AATTTATTTCTGCAATTCAAATATCCCCATCTTGTCATTCCTTTTGTGGCATGAGTATTTTGATATGCATTGTAGAATTCATTTCTCTTATTACTGATATTGTAGTTAAAATATACAATTGTAAGAGTGACTGAATGAAAACTACTAAAAAAATAGCCTATAAAACAGTGAAGGTATGGGAGCTCGTACAGTTGAGCTCCTTTTTTGATCTTAAATGAATGTCAGAAGGGTTTTGTTTGATCGTAGGTTTCTTTTCCACTTTTCCATTGACTATCCTTTCTTATTTCTCTAAAATGGTAGGTGTGTGAAGGGAGATTGATATGAAAAAAGGTTTTGTAATTATGCTTTCTGCATTGGTCTTGGCTTCGTGTGGTCGGCCTCATCGGTCGGTTACGCCGAAGGCTCCGTCTACTAAGCAGTCTAGCCATGCTGATAAAAAACACTCAGGTATGGACTTGAAAGCTATTAAGAACAAGGATTACTCGAGTATCGAGGGGACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //