Array 1 144560-142395 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSJL010000003.1 Raoultella terrigena isolate 18054_Raultella2_Ancestor, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 144559 29 100.0 32 ............................. CCATTGATAGAATATATCGAGAAATACTACGG 144498 29 100.0 32 ............................. GCGCGATTGCTTCGGTTAAGGACAGTAACCTG 144437 29 100.0 32 ............................. CTATTTACCTGAGTAGTAATAATTGCTGTCAA 144376 29 100.0 32 ............................. CCCGCGTTATGGTTTTAGTGATCGCTTCGGAT 144315 29 100.0 32 ............................. ACAATTGGTCTTCACAAAACTGCTGCTGGTGT 144254 29 100.0 32 ............................. CATCAGCAATCTGGTCTGCCGCGATGACGGCA 144193 29 100.0 32 ............................. CATCCAGCTGTCGTCCTCCCAGACCTGCTGCA 144132 29 100.0 32 ............................. TGCCTGCCCTTCATGGTGTGAATGCTGTCGAT 144071 29 100.0 32 ............................. TACGAACGTGCCGCCGAATTCGACGGCTGTCT 144010 29 100.0 32 ............................. CGATGCCGTCCGGCAGAGTGTAGGTCGCAGGT 143949 29 100.0 32 ............................. CCAGGTATTCTTCTCGGGTTTGTGATTGAGCA 143888 29 100.0 32 ............................. CCTGTGAACTATAAACGGACTGGCCACGCTAT 143827 29 100.0 32 ............................. CGCCGGAACCGCTGACTCAGTGCAACGGGTAA 143766 29 100.0 32 ............................. GCGTCTGGTCCCCGATTGTTGAGGGTCGGATT 143705 29 100.0 32 ............................. GCGCTATTGATCGGTAGTAGATCCTGATGTCG 143644 29 100.0 32 ............................. GAAAACCATAATGAATAACAGCCTGATCGCCA 143583 29 100.0 32 ............................. CAGTACGAAAAGGCTAGAACTGATGCGCAGTG 143522 29 100.0 32 ............................. AATTTTGAGACGATAGCATTTTGACGCTTGGC 143461 29 100.0 32 ............................. CGGCCAACGTGGTCGAAGTTACCCGCAAGATT 143400 29 100.0 32 ............................. TAGTCCTGTGGCGTGCCTTTGCCCGCCGAGGT 143339 29 100.0 32 ............................. TAAAAACTCTAATTTCTCAGTCTGGTGGTGAT 143278 29 100.0 32 ............................. CACATGCTGTACGCCGGCATACCGCTGAAAGT 143217 29 100.0 32 ............................. TTTTCTCTTTTCGGCCGTAAAAATGAAGTGAA 143156 29 100.0 32 ............................. GGATACGTGTTCCTCTTTTTATGGAGAATGCG 143095 29 100.0 32 ............................. CCACTAACGGGTTAACGCTGCGGCTGGATTCA 143034 29 100.0 32 ............................. TGCTCCCGGTTTTACCTGACAGCTGGAAAATG 142973 29 100.0 32 ............................. AGTGCCGCACCGTCAACGAGTGGGATAGCCAG 142912 29 100.0 32 ............................. CCCGGTTAATGACATACGACGCAATAATCGTG 142851 29 96.6 32 .............T............... CATTTTGCAGTCCGGGGAACTCTTCGATGTTA 142790 29 96.6 32 ........T.................... AGATGGAAGAAGTGGGGCCAAAGGTGCCGCTC 142729 29 100.0 32 ............................. CGTCCATAGGTCAGGGAGGTGTGCAGGTAGCG 142668 29 96.6 32 ...........A................. GTCGATCCAGTCGCTCGCGTCAGCGCTGCCAG 142607 29 100.0 32 ............................. GGGGTAATGTGTCTTCAGCATGAATATGGAGA 142546 29 100.0 32 ............................. CATCCAGTGCGATCTGCTCTTTTGCATGCTGG 142485 29 100.0 32 ............................. GTAAATCTGGTATTCACTGTCGTTATCACCAC 142424 29 100.0 0 ............................. | G [142403] ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGGCAGCAGGTGAAATACTCCCACCGCAACCAACCCCCGATATGCTGCCTCCGGCAATTCCTGAACCGAAACCTATTGGTGATTGCGGTCATAGAGGGGGTAGTGGATGAGTATGGTTGTCGTTGTGACGGAAAATGTCCCACCGCGATTACGAGGTCGACTTGCGATCTGGCTTCTGGAAATACGGGCTGGTGTTTACGTTGGTGATACTTCAAAACGTATCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGAGGCAGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCTGGTTTTGAGTTTCAAACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGACGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAACGGTTCTTTAATAATGCGAAATTGTTACAATCAAGTTGGTAGAGTGTTGGTTAATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : GCTGATATCACCGAACTGGCGCAGAGCCTGAATCGTTCCCCGCAGCAGCAAAGCGCCAGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGCCGCTCGATGCGGCCGGGGAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGGGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGCGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //