Array 1 8840-8144 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LBKH01000087.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000004060, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      8839	    36	 100.0	    30	....................................	TTTTTCCATATCTTCCTTTCCACTCCCACT	
      8773	    36	 100.0	    30	....................................	AGAGACTAGAGATTTTCTTCAGACTTATGA	
      8707	    36	 100.0	    30	....................................	GTTTTACTCATTCCCACAAAAGTATGTATT	
      8641	    36	 100.0	    30	....................................	GAAAAAGGATTATGATAATTTCTATCTGCT	
      8575	    36	 100.0	    30	....................................	GATGAGACCACAGAAGTTAACTATCTCAAG	
      8509	    36	 100.0	    30	....................................	GCAAATATTTGGATAGTCGACCCTTCCCAC	
      8443	    36	 100.0	    30	....................................	TAATACTAATTTACTAGCGTCAAATAAATC	
      8377	    36	  94.4	    30	...........A..C.....................	AATTTCCATAATCTGATCGCCAACCAGGAG	
      8311	    36	  97.2	    30	..............C.....................	TATCTACATGACAAATATTCAAAATTTTGT	
      8245	    36	  97.2	    30	..............C.....................	CAATATACCAACCAATCCTGTTACCTGATT	
      8179	    36	  97.2	     0	..............C.....................	|                             	
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.7	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGTATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATCACGATTTTAGAACTCATTAAGGCACTAGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGATTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCAACGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  ATTAAAAGATGATTGTGGAGGCGTTGCAATGTTTTAGAGCTGTGCGGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGGACGTCATTTATAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCAATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGAT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//