Array 1 17279-18326 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDPA01000020.1 Vibrio anguillarum strain 090710-1/17A contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 17279 28 100.0 32 ............................ ATTCAGGAAATAACAATGAACATTGACTTGCC 17339 28 100.0 32 ............................ AAACTTAGATTGGCCATTTCGGTAATCGGCTA 17399 28 100.0 32 ............................ ACCATTGGAGTAAATGATGGAATTACATCAAG 17459 28 100.0 32 ............................ AACTGATTCAAAGCGCTGCGCGTAGCGGTTAA 17519 28 100.0 32 ............................ ATAATGTTTCCAGCGTCAGAAGCAAACATATA 17579 28 100.0 32 ............................ GAGCTCATTTGGAATTTGTTGTTGAGCAGCTA 17639 28 100.0 32 ............................ GTCGGGTAAAATTATCGTCGTGCCAAGCACTT 17699 28 100.0 32 ............................ TCTCCGATAAAGCGCGTCAATATGGCGCGCAA 17759 28 100.0 32 ............................ ACTTGGCATATAGCGAATTTCTGGGTCGTTAC 17819 28 100.0 32 ............................ TTCAACACTGGCCGCTGGCTGAGTTTCTGCAA 17879 28 100.0 32 ............................ AAAATGATGCGGTATCTATCGCACTGTTTGAA 17939 28 100.0 32 ............................ TTTAAACTCTTGGATGAGTGAAGAGAAAGCGA 17999 28 100.0 32 ............................ CAACCCAAAAAGCGGTGGCAGTAAAATAAATA 18059 28 96.4 32 C........................... GTGTGGCCATTTACGGTAAGTTAGCCGAGGTC 18119 28 100.0 32 ............................ TCTAGTGCTCCGTTTAACATACCCATGTGATT 18179 28 100.0 32 ............................ AGAAATACTAATTTTGCCGTCTTCGTTATCCT 18239 28 100.0 32 ............................ CACAAGGCCGTTTCGCCCCACTTAAGCCAGTT 18299 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CGATGTAACTTACGTAAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGTCCTATGGGCAGCAAAATCCGGCAAACCGCTGGAGGAATGCTTGGCGGCTTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAACGCTCACCAGAAAAAAACAGCAAGTTCCCGCTGTTTATTCAGATGGAGCAGCAAAGTATATCGCAAGATGGGAGCTTCGATTGCTATGGTTTGAGCAGCAAAACGCATGGGCAGTCAGTATTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTACCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : AGCTAGTGATCAAATATGAGACTGATGGAGCTAGCGAAACACGCCAATCTGACCTAAGAAATAGGTATCTCTGCCTACTTTTTTGAGTTTGGAGTATGACAGAGAAAGAGAAGTACATTCACAAATAGTTAATTCATAAATAGTTAATATTTTTATAATTCTGATACCTATACAAATTAGGCTGTCAGCGATGTTGGCAGCCTAATTCACGATGAATGTTATTGACTAGCTAGTTGCACAAATGGAAAAGTTTCCTTTCGATGCCTCCTCGATATAGTTACTCCACCAGCGCATCATTTCTCGACGCTGGTTAAGATACAACGCCCGATTGTAAATACCTCGAACTTGATTTCTATCTACGTGAGCGAGAGCAAGCTCAATAACGTCATTATGGAAGAGTTTGGTTTCATTTAGCGTTGTACTAGCTAGAGCACGTAAACCATGAGACACCAAACGATCTTTAAAGCCCATACGTTTAAGGGCAATGTTAGCCGTTTGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //