Array 1 953431-954000 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849476.1 Acinetobacter baumannii NIPH 190 acLZJ-supercont1.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 953431 29 96.6 31 ............................T GAAAAACGTAACGCAGAACTACAAGCTGTTA 953491 29 96.6 31 ............................T TCCAATTCGCATAATGAGCACTGATGTTAAA 953551 29 100.0 31 ............................. AACGGTAAAGTCATTCCATTTGTACGTTTAT 953611 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 953671 29 100.0 31 ............................. CTTGATGCAGGTCAGTGCAATAAAAATGATC 953731 29 96.6 31 ............................G ACATGGCTATGAAGTTTTATACACATACAAT 953791 29 100.0 31 ............................. CAACAACGCTGTCAACCTTTAGCTAATAAAT 953851 29 100.0 32 ............................. TTAAGCCTTTGATTCCATTGGGTTTTTCTTAG 953912 29 100.0 31 ............................. AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 953972 29 89.7 0 ........................AT..T | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.6 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTGCGATAAATTTTAGGTGTCGACTTATTCATTTGAAAATTATATTGTGGAATAAGCCTTTAGAGATAGGTTTGTGCAACAAAGCCCCCTAGATCTGTCATGAGTTCATAAATTTCATTACACGATAAAAAAGTCATTTCACTTAACCTACATATCATTTTGAGGTATTTCTAACGAATCAAGAAACAAAATTCTAATGAAGAAACAGCGATACTATAAAAATAAAATTAGCTGCGATGGAAGGCTACTCTAAGTCGATATAAAAATTAAGCTTCTGTTGCGTACGAGAACCTTATTTTTAGTAATCTATTTTTGCATCACGCCAAAGCCATAATCATAAGACCAAGTAGGCACTTCATCTCTATTGTAAGGTGTTAAAGATATACGGCAGCCTTGCTCATTGGCAATTTGGTACTCTGCTTCGGA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAAGATGGCGGGAGTTGAACCCGAAACAATCAAACACTATCAATTACTATTAAATTACCGACTTTAAAAATCAATAACTTACATCCCCTTGCCTGAATTGTATTTTACTGTCTTTGAGATATGCCTGTCAAAAAACCTGTCATGACTAAATTAATCTTAATCACGTATACATGATTTGAATTGTAGAATTTCCGACCAAATGCATCTCGCATTGCGACTTTAATTGTCGCGTCCCTGATTTCCAAAGATTTTTAAAATTTGAATTTTTTTGACCTCATCTCTACCATAAAACTTGATTTTGTTACGTAATCAATTTTTGAAATGAAACCGCGAATTTTTTGTTTGGTGGACGTGAATAACTGCTATGCAAGTATAGAACGTTTTTTCAATCCACATTTAATAAATAAACCTGTCATTGTTTTATCGAACAACGATGGTTGTGCTGTTG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 556340-556610 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849474.1 Acinetobacter baumannii NIPH 190 acLZJ-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 556340 30 93.3 30 ............................AC CGCCTAGAGTTGTTTTGCTTTCAGTTTTGG 556400 30 100.0 30 .............................. TGGATAGCAATGTTCTGGTACCGATCGACA 556460 30 96.7 31 ............................A. AGCTTGATCAATTCATTGCGTTCTGATTCAT 556521 30 100.0 30 .............................. ATCCACCAAAATGAATTGATACTCATAATT 556581 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== =============================== ================== 5 30 97.3 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : CAATAAAAGATGGGGCAACTAGTGCCCCGATGTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 564547-565714 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849474.1 Acinetobacter baumannii NIPH 190 acLZJ-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================== ================== 564547 30 96.7 30 ............................A. CATCGCCAGCAACAAACTGCAATGAGCCAG 564607 30 100.0 30 .............................. GGTGTGATCATCAATACAGATGGGACAGGT 564667 30 93.3 30 ............................CG ATAGAAGATACAGAAGAAAATAATGCTATT 564727 30 96.7 30 ............................G. CAACCAAAGAACCCCAAGCAAATCGAGCAA 564787 30 100.0 29 .............................. ATCTAAGCGTCCCATTAGAAAACCTTTAT A [564812] 564847 30 100.0 30 .............................. TCAGATGAAACCATACGCACTAAATGCATT 564907 30 96.7 30 ............................A. GTAATCTTGGTATGGGAGGTGTAAAGCCAG 564967 30 96.7 30 .............................G TTGACCCATCTATTGATGCATCTGTAAATA 565027 30 93.3 30 ............................CG ACTGCTCCTAAAGCTCCGCCGACTGACATT 565087 30 96.7 30 ............................A. GTGAACATGCATGCATTGATGCAATATGCG 565147 30 93.3 30 ............................CC ACTGTAGTACGAGTAACGTTACCGACTAAA 565207 30 100.0 88 .............................. TTTCACCTGATGGATNNNNNNNNNNTAGGTTCATGGCGGCATACGCCATTTAGAAAGTAATCTCAATGGTGTGACTTGTTAGCACTAG 565325 30 100.0 30 .............................. AATGCAATTCGGAGCATGGCGTACCGAAGA 565385 30 100.0 30 .............................. GTGTGGACTCCTCAATCAGCATCTTGAAAT 565445 30 93.3 30 ............................GC TCACAAGTCAAATACTATTTTGCATTATTT 565505 30 96.7 30 ............................A. CTTTTTGCTTATAGTAACAAGTAGCAGAGT 565565 30 93.3 30 ............................GA ACTGCAATGCTGTGAGTAACGAACCTTGAT 565625 30 93.3 30 ............................AC ATTCCAGCAAACAACAGTGTAGATCCAATT 565685 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ======================================================================================== ================== 19 30 96.5 33 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCATTTAGAAAAGAAGGGTATAGCAAATATCGTGATGGAAATG # Right flank : CCAAATTTTGGCTTTTCACATGTCTAAATGTGTTCATGGCGGCATACGCCATTTAGAAAAGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.23, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 566468-567634 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849474.1 Acinetobacter baumannii NIPH 190 acLZJ-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 566468 30 96.7 30 .............................G AAGCGTCATGAATATTTGGTTTGGCTTGAA 566528 30 93.3 30 ............................TG ATCATTAGTGCCTCTTCGGAAATCAACTTT 566588 30 93.3 30 ............................GA ACTGCAATGCTGTGAGTAACGAACCTTGAT 566648 30 100.0 30 .............................. TTACCAGACACAGCACCTTCTTGAAGCATC 566708 30 96.7 30 .............................T GACGGTTAGTTACTTTTGATGTACCGCCAC 566768 30 100.0 30 .............................. TAACTCACCGCGATAAATAGACGCGATACC 566828 30 96.7 30 .............................G AGACACAGAAAAAGAATGTGAACAATGGGC 566888 30 93.3 30 ............................GT CGATTAAATCAGTCAAAGGACCCTAAGCCA 566948 30 96.7 30 ............................T. AAACTCACAACCTAGAAAAGATTGCTAAGG 567008 30 96.7 30 .............................T GAAAAAGCCCCATTCGTTGTGAATAGGGCT 567068 30 100.0 31 .............................. CAAAAGCTTTACGGTAAGACACGTTATGCAG 567129 30 93.3 30 ............................TA CGAAAACAAAAGATACTCATGCACCAGAGA 567189 30 93.3 30 ...............T.............A CAGCATTTACACCAGCAACCTTTAAAGCAG 567249 30 93.3 30 ............................TG TTACATGCCCAATTGGTTGGCGCATGTCAT 567309 30 93.3 30 ............................TT CTAAGCGAAGGCTAACGCTCACATTCAAAA 567369 30 96.7 26 .............................A CTGAAAACTTCACAGCAGGCAATCCA 567425 30 93.3 30 ............................TG TAAAGGATGTGAGGAACGTCGTGAGTGGAT 567485 30 93.3 30 .................T...........A ATAACCACGGTTATGGTAAGTCACTTTTAC 567545 30 83.3 30 .......A.A.....T.T..........G. GTTCAGGTTGAGGAGATGAAGTGATGTGAT 567605 30 63.3 0 ...T...A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 20 30 93.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTGATACGATGGATTAACAACAGAA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAATAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //