Array 1 407151-411348 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFHL01000003.1 Legionella pneumophila strain POC2 NODE_3_length_448921_cov_40.5905, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 407151 37 100.0 35 ..................................... GAGACAATAGCGCAATATATAGAAGAAGAATAATT 407223 37 100.0 36 ..................................... TTCAGCAAAATCAGGTAATACACGCTTTGACATAAC 407296 37 100.0 35 ..................................... CAAGAAATAAAAAATATTTTCTTTTAAGTGAACGG 407368 37 100.0 34 ..................................... AGAAGTCTAACACTGTATCATTTTCATTACTATG 407439 37 100.0 36 ..................................... CAACAGCAACAACTGGGTAAGGTTGACCACAGATAA 407512 37 100.0 36 ..................................... TGGAATTATAAAGGCGATATGTGCTATAGAACAATT 407585 37 100.0 36 ..................................... GGAGCTGGTTAGAATGATTACACACACTATACAACC 407658 37 100.0 33 ..................................... TTCTCTTAATGTTTCTTACGTCTTTCTTAAATT 407728 37 100.0 35 ..................................... TACAGTGTTAGCTAGCACTAATCCTTTTGTTCCCA 407800 37 100.0 36 ..................................... TCATATAAAGGCTGCCAATCAACAACCCAATCATTA 407873 37 100.0 35 ..................................... GCATTTGGCGTTTATGTAATGCAAGCTTACTCTCC 407945 37 100.0 34 ..................................... AATGCAGGAAATGGAATTTAACCTAACCTTTTTA 408016 37 100.0 34 ..................................... CTTTTTGAAGTTCCTGAGATGTGGTGACTTCGGC 408087 37 100.0 33 ..................................... TCAAATGCTGCTGGTACTGCTGGTATATGTGGA 408157 37 100.0 35 ..................................... CAGTTGGTTACTCGAAAATGCGAGACGCTTTGAAT 408229 37 100.0 35 ..................................... AGCTAGTGGCGGAGACAAATATGAAAATTGATTCA 408301 37 100.0 34 ..................................... TCAGCTAACGGCTGCGCATATTTTAAATTATTAG 408372 37 100.0 32 ..................................... CTTGTGCCGGCTTGAACACATCTATATCTATA 408441 37 100.0 35 ..................................... ATAAACAGCCATCCCGATGTTATAAAGGGGATGGC 408513 37 100.0 36 ..................................... AAAATGATAAGGCGAGCGTTTCAGTTCGCATAATGC 408586 37 100.0 35 ..................................... AGCTTTGCTTAGTGTTTTAGGTGCGGAATATGAGG 408658 37 100.0 35 ..................................... ATAACTACCACGTCAATTGCATTTAATCCTTTCGG 408730 37 100.0 34 ..................................... ATTAAAAGTTATAAATATTATATATTAGTTTAAA 408801 37 100.0 34 ..................................... TCATAGTTATCATCAATGCATGACCAGTCTAGGT 408872 37 100.0 35 ..................................... TATTAAATGAATTTGCGCTCCCTGACTGAAAAACA 408944 37 100.0 33 ..................................... ACCTATAAGAGCTGCAATCCATATTGATTTTAT 409014 37 100.0 34 ..................................... AATACGGGTGCTGCTAAAGCACTGTTTCGCTATT 409085 37 100.0 35 ..................................... TCAATGTTTGCCACCAATAACAATAAAAATAGGTG 409157 37 100.0 33 ..................................... TAAAATCATAGGTTGCAGGGAGCGCATCTTGGT 409227 37 100.0 36 ..................................... TGTTTGGTTGCCATATAATCCAACCCCCGCAATTAA 409300 37 100.0 36 ..................................... GTCGTAGCACGCGATTGTTCCCACGCTTGCGTATCG 409373 37 100.0 36 ..................................... CAAGCTAAAGCGGTTCTAGGATTTCCGCCAGTAAAG 409446 37 100.0 36 ..................................... CGCGTTGTAGTTCATGATTCAAATTCAGTATATACT 409519 37 100.0 34 ..................................... CTTTACCTATAGCAGCAGCAACCACCCCAACAAA 409590 37 100.0 35 ..................................... TCGGTAATAATTTCATTTCCTCGTTTGATTATCTT 409662 37 100.0 36 ..................................... GCTATTCAAAGAGGACGATATTGTTAAGCTTGGCAA 409735 37 100.0 35 ..................................... TGTAAGATTGTTATGAAATCTGGTTTCCATGCTTT 409807 37 100.0 33 ..................................... AACAATAATTCCTAATTCTAGCTCTAGTTATTT 409877 37 100.0 33 ..................................... GAATTATATCTACTGTAGCGGGATCGGAAACGT 409947 37 100.0 32 ..................................... TAACTGAAACGTCCTTATGCCTCAACATAATG 410016 37 100.0 35 ..................................... CGCAGTGCAGGAGACAAACAAAAAACTTTAGAAAG 410088 37 100.0 34 ..................................... CTTTGTGCAACAAGTTCAAATTCATCATTAGTTG 410159 37 100.0 35 ..................................... CAATAGACCGAGTGTATTTCTTCTCTTAATGAATC 410231 37 100.0 36 ..................................... ACGCAGCAGCATCCCCACTAGCAGCCCAACTATCAG 410304 37 100.0 33 ..................................... TTCTTTACAATTATTATTGGCACAGTGTTTGCA 410374 37 100.0 36 ..................................... TCCTCGTAAATTTCAGGTACATTTACATCATATGGA 410447 37 100.0 37 ..................................... AACGGCATTCGTTACGGTTCACGCCGAGGCCATAACT 410521 37 100.0 33 ..................................... AATATAACACAACAGTATTTAGACGGCATAAGA 410591 37 97.3 34 G.................................... AGGATAAAGCCATCACACTCAAATTGACCATCAA 410662 37 100.0 35 ..................................... TTCCAAAACATTCAAGGTAATGCTCTTAAGTATAA 410734 37 100.0 35 ..................................... GAATGGGCTGCTTATACTTGGAAGTCTATAGAAGT 410806 37 100.0 35 ..................................... TGCCTAAACCTGATTTCTTCCATAGAGTAAACGTC 410878 37 100.0 34 ..................................... TGCAACGGGTCGAAGTAATCCATTAAGTCAAACA 410949 37 100.0 35 ..................................... TAAAGGCGCAGTACCTTTTTTTAAGTCTGTGAATA 411021 37 100.0 35 ..................................... TGTAATCTTCAACGTTAAAGATGAATTGTTGTGCT 411093 37 100.0 34 ..................................... CAAGAACTATTAATGGATTGGTTGGATTGGTGTT 411164 37 100.0 36 ..................................... AAATCATTGTGATTGGTAATAAAGAAAGCGGTTTAC 411237 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 411312 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 59 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCTTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //