Array 1 248828-252755 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJZZL010000004.1 Klebsiella pneumoniae isolate Prospectively collected (P), whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 248828 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 248887 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 248948 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249009 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249070 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249131 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249192 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249253 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249314 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249375 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249436 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249497 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249558 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249619 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249680 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 249741 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 249802 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 249863 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 249924 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 249985 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250046 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250107 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250168 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250229 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250290 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250351 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250412 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250473 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250534 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250595 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250656 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250717 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 250778 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 250839 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 250900 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 250961 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251022 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251083 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251144 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251205 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251266 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251327 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251388 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251449 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251510 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251571 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251632 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251693 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 251754 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 251815 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 251876 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 251937 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 251998 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252059 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252120 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252181 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252242 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252303 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252364 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252425 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252486 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252547 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252608 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252669 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 252727 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //