Array 1 55-282 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIQV01000077.1 Pectinatus frisingensis strain MB169 PFRA_2.1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 55 30 100.0 36 .............................. TATATTTTTACATCCGATGTTTTTCCCTTTAAATCA 121 30 100.0 36 .............................. GTGCCCATGAAGCGGGAAATAATCTTTTTTTTTCGA 187 30 100.0 36 .............................. TCACCTGGTCATAGACAATTAATTTCCGGACAGATG 253 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTATAGAATCCAGCATCGTGTAATGTAAAT # Left flank : CATCGTGTAATGTAAATTATTGATTCGTAGAAGTGGTAATTACTGATATTGTGCG # Right flank : AAATAACTCCCTCCCTGAGTTCTGATAAACCAATAATGTATAGAATCCAGCAT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAGAATCCAGCATCGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 4990-823 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIQV01000104.1 Pectinatus frisingensis strain MB169 PFRA_91.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 4989 33 100.0 35 ................................. CAGCATGATACAGTTATATGGGCATTAAAAAAAGG 4921 33 100.0 35 ................................. GGTTGAAGTTAAAGGCAGTGACACATCAGAACACA 4853 33 100.0 35 ................................. TACAATCTGCTATCCCCCTGATGGAATTGGATGTC 4785 33 100.0 35 ................................. AATCTGGGGTCGACCCTAATAGCATCGGGGATATA 4717 33 100.0 35 ................................. TCTCAGGACAGCGGAGCCGCCCTTATTTGTTTGTC 4649 33 100.0 35 ................................. TATTTCGGGGGCGTTCATAGATGTTAACTGATAAA 4581 33 100.0 35 ................................. TTTAATTTGCATATTAATTAATTTATTTGGCATTA 4513 33 100.0 34 ................................. ATAATAAAACTCCTTGCAAGTTAATATATAATAT 4446 33 100.0 35 ................................. CAATAACAGCGTATAAATCCGTATAAGTTGAGCGA 4378 33 100.0 34 ................................. CGTTTATGCAGGAGTGCTTGCCGCTTTCGCCGTC 4311 33 100.0 35 ................................. TTTATTGCCGAATATACCAGCCTTTTTTAAATACT 4243 33 100.0 34 ................................. CCATGCACTGCCATTGTAGCGGTACATTTTCATT 4176 33 100.0 34 ................................. GTAAAATTTTTTTACGTCCAGTCACTTTACTATA 4109 33 100.0 35 ................................. TTTTTCGGCTGCCGGCTTTGGCTCCCAGCTGTAAA 4041 33 100.0 35 ................................. CGGTCGATATATCTACAACTTTTCGCGGTCTTCCC 3973 33 100.0 35 ................................. ATTAAAAGAGAAAACAATTAATAAAAAAATTACTC 3905 33 100.0 35 ................................. TGACAGATAAAGCAACGGTCGCATCGTCAACACCT 3837 33 100.0 35 ................................. TTGTAAATGATATGTTTTGTAGATTACAAGATTTT 3769 33 100.0 34 ................................. AACTTTCCTGCGGCCGCTGTCGCTGGTATTTGGC 3702 33 100.0 34 ................................. GTATGTCACGTCAAAACCGCCAACATTGGGATTA 3635 33 100.0 35 ................................. TATGCTTAAGAACCGTTTCTCAATTTCTTCTGCAT 3567 33 100.0 35 ................................. ATACTTGATTTGCTTGAGCCGGTCTATCTCGGCCT 3499 33 100.0 34 ................................. CCAAAAGTGGAGTAAAAACAGAATACACGAGTGA 3432 33 100.0 35 ................................. TGGCAGTAGCTTTAATATTGTGCCATTGACCGTTT 3364 33 100.0 36 ................................. GTCAAAAAATAAAAGACATTTCCCGTAGTTATTTAC 3295 33 100.0 34 ................................. AAAAACAGATCTGCGCATATCGGTGAGCAGCCTA 3228 33 100.0 35 ................................. TCACTGCATCGGTCGCTCTTAATGGTCCTTTATAT 3160 33 100.0 34 ................................. GGAATATGGTTTTGCATTAACATCATTAAGTCGT 3093 33 100.0 35 ................................. ATCATCCCAGTGTTTGTATATATAACTGTTTTTAC 3025 33 100.0 35 ................................. AATATCAAATGGATCTGTTACGCCTAATTCTTCTG 2957 33 100.0 34 ................................. CATCTTGCCTTCAAGACGGACGGCATTACGGATT 2890 33 100.0 36 ................................. TCATCAGATGGTTTTAGCGAGCTTTTCATGAATCAA 2821 33 100.0 34 ................................. TTTGTTGATTATTGGGTCGACGGCTGACTCAATA 2754 33 100.0 35 ................................. CACTTTTGATTTTAATGAGTCAATATCGCTCATTT 2686 33 100.0 35 ................................. AATGAGGCTTTGCAGGTCTAATATTTCTTTGTTTT 2618 33 100.0 35 ................................. TCAGTGGGTAAATGGTAATAATACCAAAGCTCCGC 2550 33 100.0 33 ................................. TTAAAATCGCTGTCTTCCATTGCTTTTACGGTA 2484 33 100.0 35 ................................. CCTGGTATTGATCAGGAAGGTGTATATGTATGATA 2416 33 100.0 35 ................................. TTTTATTTTGTTATTAATATACTATTTAGCATTTT 2348 33 100.0 34 ................................. TGGTAAAATCTGCCCATCAAATCTTGCATTAATT 2281 33 100.0 36 ................................. GGTCAACGAAGCACGTCGCTATGCGGGCATGCCGCC 2212 33 100.0 34 ................................. TTCTTAGGTGCTGTTTTTAGGTACGTAGTCTTAA 2145 33 100.0 37 ................................. TTTTACTTTTATTTTGTCAACATCATTGCCGATGCCA 2075 33 100.0 35 ................................. ACGAAAAATAAATATCCCCAAATTGGGGAAACACG 2007 33 100.0 35 ................................. TTGTGCATCAAAAGCCGGATATAAAAAAGGACGAT 1939 33 100.0 36 ................................. ATCAAGTGTCACGCTCATAATGTCACCTTAAGCGCC 1870 33 97.0 35 ..T.............................. TCTGAACCACAAGCGACAAATACCATACTAATTAA 1802 33 100.0 36 ................................. TGTTTTCACCTGCAAACCAAGCTTTTTAGCCTGCCT 1733 33 100.0 35 ................................. AACAATGTATGTGCCTATTGCGGAGAGGATACTGT 1665 33 100.0 37 ................................. TGTTTTTGTATCATCAGCCATGTAATCATCTCCCTAA 1595 33 100.0 33 ................................. TTCGGTAAATAAACAGTGGGGATATACTACTAC 1529 33 100.0 34 ................................. CCAAGGAGTCGCGTATATCCGACAAGGCATCATC 1462 33 100.0 33 ................................. GTTGGACATCACGCATACCGACCCGACAAATAA 1396 33 100.0 35 ................................. ATATTGCAAATGTGAAAAAACTATTTTGGCACCGC 1328 33 100.0 34 ................................. TCTTCAGCTCCTCTATTAAAGTATTGACATTGTA 1261 33 100.0 35 ................................. ATTGCTAAGTGCTTCAGCAAGTGAAGTTTTCCCGT 1193 33 100.0 34 ................................. ATCATGTGCGAGCAATTGGAATGGGAAATAATCG 1126 33 100.0 35 ................................. TTGATAGCCTTATTAGTTGCCTTCATTTTTATTTG 1058 33 100.0 34 ................................. CTGTGGGAGAAAAACTTGAACCATATACAGTACA 991 33 100.0 34 ................................. TCGAGGTGATTAAAATGTTTTGCTGGCGGTGTGG 924 33 97.0 36 ................................T CTTTGCTTCCATTTTGATTACCTCTTTTTAGTTTAT 855 33 84.8 0 ...........T.............G.G..CT. | ========== ====== ====== ====== ================================= ===================================== ================== 62 33 99.7 35 GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Left flank : CCACCATTTTTTTGGAAATGACATGTCTATTAAAAAAATAAAAAGGAATTAGTTATGTATATACTTGTGTCATATGATATTAATACTATAGATTCTGATGGTAAACGGCGTCTCAGAAAAGCAGCAAAAATTTGTCTGAATTATGGACAGCGTGTTCAAAATTCTGTATTTGAATGTAAAGTGGATGAAGGACAATATCTTTTGTTAAAACATCAGCTATATGAGATAATAAATGAAACCGTTGATAATTTAAGATTTTATCGATTAGGGAAAAATTATAAAAAAAATATTGAAAGCATGGGGTTGAATAAAGCTTTTGATATTGAGGGTTCACTTATTTTATAGTGCGAGTAGGAAGTACTGGATAATTTCTCCTGCTTTCGCACTATAAAATAGGATAATTTGCCAATAATAGGTATAATAAATTTGGTTATTTTGTATAAAAATTTTTAAAGTACTATATTTGCTATATGTGATATTAAAAAATACTATATGTAGCG # Right flank : TCTCGTAAAATAGCCATATTCAATGCTTAGGTTGCTAATTTTGTTGTTGGTCGATTTCCAATACCCAGCCTACCAGTTTCCTTCTTGCAAAATCTAATGCCGTTACCAAATAACACCATTTGTTGCCAACTTTAATATAAGTAAGCTCTGCAAGCCATATGGTATTAAAATCGATCACATCAAATTTGGGGTTTAGAAGATTGGAAAACACTTGTTCTGGATTTTTTTTGTATAAAAGAAAACCACGCGATAGTCGCGTGGTTCAAAAAAGCTTAAGCGGTGAGTCCTAATGTGCTAACCTGTAAATAAGCCTGCCAGCTTAAAATACAGATTATACATTAGGAGATGCCACTAAATGTCGAAACAACAAAATAATGACACACATAGTTTAGCACATAGTGTATCCTGAATGTAAGAAAAGCAAACGTAACAATAATTCTTGCAATGCTTTTTATGAGATGGAAGTAGGTCTTCCGTAATCAATAAGCAGGTATTGATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 292-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIQV01000052.1 Pectinatus frisingensis strain MB169 PFRA_50.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 291 30 100.0 36 .............................. AATAGATTACAAAACAAATATTATTACGATGAATTA 225 30 100.0 36 .............................. TATTGCTTTCATTTTTCCTTATCCGTTCTGCTTCAG 159 30 100.0 36 .............................. TTTATTATTTTAGTTGGTTCTAATCCGTCCATATTG 93 30 100.0 36 .............................. GTGTTTTGTACAATTTAGAAGAGCTATGCAAAAACT 27 27 90.0 0 ...........................--- | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 98.0 36 ATTTACATTACACGATGCTGGATTCTATAC # Left flank : TTATTAACTCTTTATTAACTATCATAGAAGACCTTATTTACAGACTTTTTTTCATAGCCCCGTAACCGATGTTAAGACAAGAAA # Right flank : A # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTACACGATGCTGGATTCTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //