Array 1 67409-70901 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAKV01000001.1 Mycoplasma ovipneumoniae NM2010 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 67409 36 100.0 30 .................................... AGTAACAGTTATTTTTATAAGTTCATAAAA 67475 36 100.0 30 .................................... ACAATTTAATAAATTTATTTTAGTTTCGTT 67541 36 100.0 30 .................................... CTGCCTTTTAAAGGAAAAATAAAAAGACGA 67607 36 100.0 30 .................................... AAGGCAATTCGATATATAAATAAGTTTTCG 67673 36 100.0 31 .................................... TGTAATAATAAGGCACCTCCACCCAGGAACG 67740 36 100.0 30 .................................... AAAATGTATTAGACTTTATTACACACTCAA 67806 36 100.0 30 .................................... TCTAATCCTTGATACTCTTTTTCTTTGACG 67872 36 100.0 30 .................................... AAAAATAAAAACGCCGCCAAAGCGACGCCA 67938 36 100.0 30 .................................... AATAAAATCCAAAAGAATTTATTACCAAAA 68004 36 100.0 30 .................................... TTTAGCGCGACTAAACAGGTGAGATACTTA 68070 36 100.0 30 .................................... TTTGACAACAAGCACGAAGATTTGTTAGAC 68136 36 100.0 31 .................................... GGATCCTGATTATCTAAAATATCTCTCTAAT 68203 36 100.0 30 .................................... ATCCAGGAGGTAAGGCACCATAAAAAACCC 68269 36 100.0 30 .................................... AGTTATAATACTTACACCGGTTTTGAATGA 68335 36 100.0 30 .................................... ATTTTTCGAATGTATTCTGAGTCTAAAAGT 68401 36 100.0 30 .................................... ATTGATAGGGAATTTTTATCTTGGTATAAT 68467 36 100.0 30 .................................... AAAATTTACTCAGACCATAGATATTGTCTA 68533 36 100.0 30 .................................... GACCCCCAACCCCCAATCCTTATCACAACC 68599 36 100.0 30 .................................... CTAAAAGTGACTCTATGCCCAGGATATTTT 68665 36 100.0 30 .................................... TTGCTCGCTTATTTTTTCAGAGTTGTTATT 68731 36 100.0 30 .................................... TTTTTTGCTGGTTTAGATAACTAAAAGAAT 68797 36 100.0 15 .................................... TGGAAACCAACTAAT Deletion [68848] 68848 36 100.0 30 .................................... TTACGATATACATTTTAATAACAACAGTAG 68914 36 100.0 30 .................................... ATAGGATAGTATCGTTTTTAAGGTATTTAT 68980 36 100.0 30 .................................... CAAATAAAGAAAAATCCCCTTATTGCTTGA 69046 36 100.0 30 .................................... AAGAAAAAGGACTACCTTTATCAGTTGACC 69112 36 100.0 30 .................................... TGATAAAGGTGTATTTGTAATTTGAGACCT 69178 36 100.0 30 .................................... TATTTCCAATGCGACGAAATTTTGTCAACC 69244 36 100.0 30 .................................... TAGTAAAGTCAGAGTCCAACAAATTTCAAA 69310 36 100.0 30 .................................... ATAACAAAAATGGAAGAAATTGCCAAACGT 69376 36 100.0 30 .................................... TCAAAAATGATTGACTATTTAATAAAAGCA 69442 36 100.0 30 .................................... ATTATTAATTATTTTGGCTTCGTTTGCTTC 69508 36 100.0 28 .................................... CCGAACATCGACTTATTTTAGTTTCGTT 69572 36 100.0 30 .................................... TATGCTCTGCCTAAGGAATTCAAAGCAGAA 69638 36 100.0 30 .................................... TTTAGCGCTACTAAACAGGTGAGATACTTA 69704 36 83.3 1 ...........................AG...TTTA T Deletion [69741] 69741 36 94.4 32 ................................T..A ACTATGCTCTGCCTAAGGAATTCAAAGCAGAA 69809 36 100.0 29 .................................... ATGATATAAAGTATAATTCTAGTACTGAC 69874 36 100.0 30 .................................... CTTTTGGATTTTCAGGAATGAGAGTGACTT 69940 36 100.0 30 .................................... CCGAACATCGACCCGGTCACCGGAACTAAA 70006 36 100.0 30 .................................... TAATATCTCCGGTTGCTGATATTCAAGAAC 70072 36 100.0 30 .................................... AGATTAGTGAACTTAATGTTGAGGACGGAA 70138 36 100.0 30 .................................... AAATATTTATAATTTTAAAATCAAACACTT 70204 36 100.0 30 .................................... ATCCAAAACGGCAAAGAAAAGTGAGTCATA 70270 36 100.0 30 .................................... TGACAGGGTGGAGAGTCAAACCCTAAGTAC 70336 36 100.0 30 .................................... GGTTGAGTTTAAAAAATGAGGTTTTAGTCT 70402 36 100.0 30 .................................... TTAAATGGACGATATAGCAAGCATTCTAGC 70468 36 100.0 31 .................................... AAAAGTGCCTTCTGCTTTTTATTAAGGGGGG 70535 36 100.0 31 .................................... AGTGAATATGTGTGATATCGTGAAGAGTGGT 70602 36 100.0 30 .................................... TACAAAAGCGGACTTTTAATGGTATTTTTA 70668 36 100.0 30 .................................... CAAATTTTAATAAAGTACTAAATGCCATAA 70734 36 100.0 30 .................................... TTAGTTTTTAAATATTCAATATGAGTATTT 70800 36 100.0 30 .................................... TTGAAATTTACAGGATTACTACAAGGGTCA 70866 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 54 36 99.6 29 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TAAATTATGAAATTGATAATGTAAAACTAATTAAAGCAATTTTTAACATTGAAAATGATATATTAATAAATGAAGAAAACTTTGAAAATCTCGCCGAAATTATTTTTAGTACAATGAAACAGACAATTGTAATTCTGAAAGATCTTGATTATATAAAATTTGAAAAACTGTTTAAATATAATAATATAACTTTCCTAATTTTGACAAATGATTTTACAAAATATATTTCTAAATTTAGCGAACTTGAATTAGTTGCTTTTTATTCACAGAAAACTGTAATTGATGTAATTGATAATTTGCCGATTATTCGTTATTTTGAAAATCTCAAAAATCGGCCTGTTAATGAAGATGAGTTAATATACACTTCTGAAGAAGAAAAAATGGCAGCAAAAATACATTTTTACAAAATAAAAACAAGTTTTTTAAACTAAAAACCTTTTTATAATTGATTTTTTAGTGTAAAAATCAAAAAAAAAATACCTTTTTTTCTTGGAAATGAG # Right flank : CTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAACACAATAAATACCATAACCCGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACATTGAAATTTACAGGATTACTACAAGGGTCAGTTTTTGTGCTGTACAATTTCTTACTAGAGGAAAACATAACAAAAATTGAAGAAATTGCCAAACGTGTTTTTGTGCTGTCCAATTTCTTACTAGAGGAAAACATAACAAAAATTGAAGAAATTGCCAAACGTGTTTTTGTGCTGTCCAATTTCTTACTAGAGGAAAACATAACAAAAATTGAAGAAATTGCCAAACGTGTTTTTGTGCTGTCCAATTTCTTACTAGAGGAAAACATAACAAAAATTGAAGAAATTGCCAAACGTGTTTTTGTGCTGTCCAATTTCTTACTAGAGGAAAACATAACAAAAAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 71023-72926 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAKV01000001.1 Mycoplasma ovipneumoniae NM2010 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 71023 36 100.0 31 .................................... ATTGAAATTTACAGGATTACTACAAGGGTCA 71090 36 97.2 30 ..............................G..... ATAACAAAAATTGAAGAAATTGCCAAACGT 71156 36 94.4 30 .............C................G..... ATAACAAAAATTGAAGAAATTGCCAAACGT 71222 36 94.4 30 .............C................G..... ATAACAAAAATTGAAGAAATTGCCAAACGT 71288 36 94.4 30 .............C................G..... ATAACAAAAATTGAAGAAATTGCCAAACGT 71354 36 94.4 30 .............C................G..... ATAACAAAAATTGAAGAAATTGCCAAACGT 71420 36 97.2 31 .............C...................... ATTGAAATTTACAGGATTACTACAAGGGTCA 71487 36 100.0 30 .................................... ATTTTTAGAATGTACTCTGAGTCCGGGAGT 71553 36 100.0 30 .................................... ATGTAGATAAGTCTATGCCAAATTTGCCAA 71619 36 100.0 30 .................................... ATGTAGATAAGTCTATGCCAAATTTGCCAA 71685 36 100.0 30 .................................... AATATTGAATATAAAAGGTTTGGACGGGTC 71751 36 100.0 30 .................................... GCAAATAACGAATTTAACAAAAGACTTTGT 71817 36 100.0 30 .................................... TTAAAAGACAAGGGACTACCTTTATCTGTT 71883 36 100.0 30 .................................... CTATTTTTATTATAAGATTTACTTTTAGCA 71949 36 100.0 30 .................................... AAATGAGTTCTCACTCACACTCCATTTTTA 72015 36 100.0 30 .................................... TCGTCAGAAAAACTGGGGGCGTCCCTGCCT 72081 36 100.0 30 .................................... TTAGATAATAAAAAGTTTATTTATAATATT 72147 36 100.0 30 .................................... GCATTTTCTTGTAAAGAAGTTTTTAGACAA 72213 36 100.0 31 .................................... TTTGACTGACGCAAAGGCATTTCCTTTTTTA 72280 36 100.0 30 .................................... TACTTTTAATAGTCCTATTTGACTAGACCA 72346 36 100.0 30 .................................... GTAAAAAGATAAATAAGGCAGCTAGCTCTA 72412 36 100.0 30 .................................... ATCTTTATTTTTAATATCTTGTTTTCAATT 72478 36 97.2 30 ....................A............... ACTATATTTTGAGTGTCTTCTTTTCCTAAT 72544 36 97.2 30 ....................A............... TTATTTTGTAAATAAAGGTCATTTTAAGTT 72610 36 94.4 34 ..............T.........A........... TTAAGACATCCGAGGAGGCTTATGAAAAAAGCAT 72680 36 69.4 36 ....G....AAT..A......G.TT........GGG ATGAATACTACAAGGCAAGACGTAAGAGCAAGTATA 72752 36 69.4 33 A..A....ATG.C.G...A.T...T....A...... AACATTTAGACAAGGGAAGTTTCAAATGCCGTT 72821 36 75.0 34 ...C..........G....CA...A.C..AC....T GGCTCTACCAACAAATTATCACCTATGGCCTATT 72891 36 80.6 0 A...CC......C...........T.....C...T. | ========== ====== ====== ====== ==================================== ==================================== ================== 29 36 95.0 31 GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Left flank : TATTAAGGGGGGGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACAGTGAATATGTGTGATATCGTGAAGAGTGGTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTACAAAAGCGGACTTTTAATGGTATTTTTAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACCAAATTTTAATAAAGTACTAAATGCCATAAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTTAGTTTTTAAATATTCAATATGAGTATTTGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTTGAAATTTACAGGATTACTACAAGGGTCAGTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAACTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAACACAATAAATACCATAACCC # Right flank : CTAATCACAAATTTTAATAGCTTTGCTATGTTTATTTAATGGATTTAATAGTAAATTATTTAGAAAATTAAAAAATTTAATTTGAATTTAAAAATTCTTTTATCTGTTTTGAAAGGACAAAAAATGAAATACCTTGAACCGGTTTTTCATTTATAAGTCAAAAAGTCATGATACCAATTACCTTGTTTTTAGTATTTAAAACAGGACCGCCACTATTTCCTGTAAATAAGTAGAAAAATTTCAGACAATTAGTTTTTTGCCTATGATTTTGATTGCACTTTTTTTTTTTTTTTTGGGTTTTTGTTTTTGTGTTGTACAATTTCTTATTAGTGTTAAACAAAAATTTTTACTTTTATATAATTATAAGTAGTTTTTGTGCTGTACAATTTCTTATTAGAGTAAAACTATCACGAAGCTCAAACAAAAAATCAAGCAGTTTTTGTCCTATACAATTTCTTAATAGGTAAAAACTGAATTTGATTTTTTTTTTGATTTTTTGC # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTGCTGTACAATTTCTTACTAGAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-40] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //