Array 1 1371585-1369962 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045531.1 Lacticaseibacillus rhamnosus strain IDCC 3201 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1371584 36 100.0 30 .................................... TCAAGCGGTGTAATTTTTTAGCTTTTTTAG 1371518 36 100.0 30 .................................... TCGCGTTCCATTTGACTCACCTCCTTAACT 1371452 36 100.0 30 .................................... TCTTGATCTTCTCTTTAAAAACAGAAAATA 1371386 36 100.0 30 .................................... TATGGGAAACAGTTAGTCACTGTAAACCCT 1371320 36 100.0 30 .................................... ATGGGTAACTAAAGGTGATCCAAACGATCT 1371254 36 100.0 30 .................................... CAGTGTTGATTGTGATGTCTTCTGCTGTTC 1371188 36 100.0 30 .................................... AACGTTGGCTGAACTTGACCGAAAAATACG 1371122 36 100.0 31 .................................... TCGACCAGCTCTATGCATTCGAACGTCCAGG 1371055 36 100.0 30 .................................... CCTACCGATGACGTTAATTCCAGAAATAGA 1370989 36 100.0 30 .................................... CTTTGCTATGCGGCATCACATTCACTGTGC 1370923 36 100.0 30 .................................... AAGCACAAGCCGCGATTGATGCGCTGCATC 1370857 36 100.0 30 .................................... CGCCTTGCTTGAGCCACGGAAGACGTCTCA 1370791 36 100.0 30 .................................... AAAGTAGCATTGCAGATTTGGCAGCCGCCA 1370725 36 100.0 30 .................................... GGTAACACTTGCGGATTTGAAGACGATGAT 1370659 36 100.0 30 .................................... CCCATTCTTATTGTCATTGATTTGCTTACT 1370593 36 100.0 30 .................................... TCTTGAATGGCATCGCCATCAGGCTTGGTA 1370527 36 100.0 30 .................................... CAGCATAAGAGACTTGTCATCAGTCGCCTA 1370461 36 100.0 30 .................................... AAGTGTCATGGAAGCAATATCACTCTTCTT 1370395 36 100.0 30 .................................... ACGTTTAGAATGATACCACTTGGATGTTGT 1370329 36 97.2 30 ..................................A. TTTGACCCTGCAACGATGGCAACGACGTCT 1370263 36 97.2 30 ..................................A. AACGTTTCGGTGTTGTATAGCGTGTCTTGG 1370197 36 97.2 30 ..................................A. AGCCCTGAAAGAAATTGATTACGGTGTATT 1370131 36 97.2 30 ..................................A. AGGCGAAGAACTGGCGCTGACAGTCGGTGA 1370065 36 97.2 30 ..................................A. ACTCGGGTATTGACAAAGATCGACGCGGCA 1369999 36 83.3 0 .......................AA.C....G..AG | T,C [1369964,1369970] ========== ====== ====== ====== ==================================== =============================== ================== 25 36 98.8 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGCATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //