Array 1 2300982-2300753 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050993.1 Chryseobacterium sp. NEB161 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2300981 30 100.0 36 .............................. TAATCATCAACCTTCATTATTAGACGAGTAAAGAAA 2300915 30 100.0 37 .............................. AAGAACTATTTGAGTTCACGGAACAACTCATAAAACA 2300848 30 100.0 36 .............................. TTTTCTCAGCTTCTGAAAGAATATCGTGTCCTAATC 2300782 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 37 CTTTTAATCGTACAATACTTGAATTGAAAT # Left flank : GGTAAACTGTAGACTTTAAATCTTTCAATTTTACCATTTAAAGTTGGTACACTAATGATTACTGGTTTGCTTTCCTTCCCTGTAAGTTGGGCATTTTGCAGTTGTGTGCGAATAGCGTTAACATCCAAAGAATAAAACTTGGTTGCTCCATTTTGCCGTAGATTTTCACCTTTCATTGCTGTAGGTGTCCACTGAGCTAATGCGCCAGCCACCATCCCAAAAGAAAGGAGAGTAGTAAAGATTTTCTTCATTATTAATAAATTTTTAACATCCCAAATATATAATTTAATTATTGTTGAATTTACTTTTTGGTGAGCATACTATAAATAAATAATAATAGGACTGAGCCACCAATGGCCAATAGCCAACTTCTTGGGCTCCAAAAAGAGTCTACATCACCCCAGCCGAGGACATATGTTCCGATTGCACCACCTATAAAAGCACCTACAATCCTTGAATTGAAATATGCTTTTAATAAATTTGTCATTTTATTTCTATTT # Right flank : AACAAAACTACCCTGGAAAGGTAGTATACGGGTAACTCTCCCCCTCAATCTCAATTATCAAATTCGTAATTTTCACAACATGCCTGGATCCTCGCATAGGCCTTTCCAGACGATAGCTAGGTTTAAGGCACAGTAAACCGATCACCGGGAAAGCCCATTAATTAAGGATTTTTCAGTTTTCCCAAAATAGCAAGCCATCCTTTAAGGATTCTCCATTCATAGCAAAGCCATAGTAAAGCCATACCAAAGCCATGGATAGTTCATGGATGGGATTTGTTTTTACGATTATATTATTCTTAATAATCTGGTTAATTATTGCCAAATTGATAAACAGTAATGGTGGTTGATTGATGGGTGGCGATGTAATGATAATTGTCATGTTTAGGGATATTTTTTTTCGATTGCTTTTTTTGGCAAAGCTTTTTCTCTAATATCACATTTTACGAGCCTCTATGGCTCAAGATGCCCATTGGGACACATTATAATTTCTGTTATGACCA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACAATACTTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 2305650-2306466 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050993.1 Chryseobacterium sp. NEB161 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2305650 47 100.0 30 ............................................... TAATAACAAAAAGGTATAATGTACCTTTTT 2305727 47 100.0 30 ............................................... CTATTGAGCTGGTGAAGCAAATGCAGGAAT 2305804 47 100.0 30 ............................................... AATATCGCCGTAAAGGCAAATTAATTGGCT 2305881 47 100.0 30 ............................................... TAGGATATGTTTATCCTGATGCACGAAGTA 2305958 47 100.0 30 ............................................... GAAGCAGCTCAAAGAGACTACAGGAACTAC 2306035 47 100.0 30 ............................................... GCTGCGCAGCTTGTAATTATTTCGAATCTT 2306112 47 100.0 30 ............................................... AACTCGAGATAACATTTGTAAAAAAACATA 2306189 47 100.0 30 ............................................... TAAAAAATATTGCAAAAGTAGGCGATTCCG 2306266 47 100.0 30 ............................................... AAGCTTATTTACTTGATATGGCTACACCTA 2306343 47 100.0 30 ............................................... ATGTTCAACGTTCAACCTTACGATTATCGC 2306420 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 11 47 100.0 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATCACACAAC # Left flank : CACCAGATAAGAAATGCTTGTAAATACGTGGTTTGGAAGGACAGAAAAGCGTTTTCTGCCGATATGAAACACATTTATACTGCGCCTACAAAAGAAGCCGCCAAAGCAGCCCTGGAAGATTTTGCAACCAAATGGGAAAGTAAATATTTGTACGCCATTCAATCCTGGAGAAACAATTGGGACGAACTCACCGTATTTTTTGATTTCCCAATCGAAATCCGAAAAATCATTTACACCACCAATTTAATTGAAAACCTCAATGGAAAAATCCGAAAATACACTAAAAATAAAATGTCTTTTCCTACGGATGATGCTGTTTTAAAGTCGGTATATCTTGCTCTAAAAGAAGCTACCAAAAAATGGACAATGCCTATCCATAATTGGGGATTGGTTTTAAACCAATTTATGCTTATTTTTGAAAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTCTACTTACACACTTTACGGGATAGTGTCGAATCTAATGATTATT # Right flank : CCTCAAAATTTAACCCACTGTTTTTCAGTGGGTTTTTATTGCTTTTAGAATCTTAAAATTCTTCCTGATAGTATCACAGATGACAAACCGATTCCAGCTTTTTTATTTCTACAAAGAAAAAATCTCAGTTTGAAAATATGTTTTTTATTCTTTGGGAATGGTCAATATTATTCTTCCATTCTCTTTTTTTACAATATTTTCTTTTTCTGCAAGATCAACTGTATAGCGCAAAATAGCATCAATTTGTTTACCCAATTTCGCAAAACCAAAAGTGCGTGCCAAATAGCGCAGCAATTCGTCTTCTTCGATGCTTAAATTGTCTGTTATCACTTCCTGCAAAGCCACCAAAATTTCTTCGGGAGCAATATCCTCCATATTGCGTTTTTCCGTGTCGTTGATACGATAGTAATTCAAAGCAGTGCCGTTACTCCAATAAAACGGCTGATGATGTACTGTCTGCACAAGATTCATTTCTTTAATGATGCCTTCCAAATATCTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATCACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.20,-3.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //