Array 1 90932-88098 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJLQ01000003.1 Legionella pneumophila strain 2532STDY5467630, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 90931 37 100.0 35 ..................................... AAGAAAATCAATAAATCCAAACAACCAACGAATGT 90859 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 90786 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 90715 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 90645 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 90573 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 90503 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 90436 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 90366 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 90294 37 100.0 36 ..................................... ACTTTCACTGTAACAAGAAACGCCGACGGCAGAGGC 90221 37 100.0 35 ..................................... TTATATTCTCCACGTTCATTATTTGTACAATATGA 90149 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 90077 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 90005 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 89932 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 89861 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 89789 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 89718 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 89646 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 89576 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 89505 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 89433 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 89361 37 100.0 34 ..................................... ATAGTTAGAAGATTTACTCTAGGAGTTTATTGGC 89290 37 100.0 35 ..................................... TGTAGCGAAGGCGAGGTTCCATAATGTATAAATTT 89218 37 100.0 34 ..................................... GTGCATGGTTTGCGCTTTGCAACCCTTCCGCTGA 89147 37 100.0 35 ..................................... TTGTGGTTATGCTTGTTCCTGTACGTGCTGTTACT 89075 37 100.0 35 ..................................... TCATAACTCTATTCAAATTGCCAAAGTAAGCAATC 89003 37 100.0 37 ..................................... TCAGTACAGCAGCTTTAATCTCTGCAATCGCCTTAGA 88929 37 100.0 35 ..................................... CTCTAGCCCGTCATATTCTTCAACTACCCAATCTA 88857 37 100.0 36 ..................................... TTTTGAATGTCTGTTTCAGTGTCGAAACTTAGTAAT 88784 37 100.0 35 ..................................... GCATCTTCTGAATTAGCCACGTCTTCAAGACTGTT 88712 37 100.0 35 ..................................... TCTAACTAGTTGAGGCGCTCTAGCTTTTATTTCAG 88640 37 100.0 35 ..................................... AACAGAAAACATGCACAGAAGAAACTGGAAAGCAG 88568 37 100.0 34 ..................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTT 88497 37 100.0 35 ..................................... ACACCTACACCGTACTGAGCACCATAGTGTTCAAC 88425 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 88353 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 88282 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 88209 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 88134 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 40 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //