Array 1 7995-8323 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOI01000068.1 Planobispora rosea strain NBRC 15558 sequence068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7995 28 79.3 32 AC....A..-.C.A............... CACGATGAGGCGGGGTCGTAGTACGCCCACGG C [7997] 8056 29 100.0 32 ............................. ATCGGGTCTGCGGGCCGGACGCGATACGCCAC 8117 29 100.0 32 ............................. CGCAGGACGGGGCTGGCTTCGCCGAGCTTGCT 8178 29 100.0 32 ............................. ACGAACCGGTCGAGGCTGGCGCGGATGTCACC 8239 29 96.6 29 .......................A..... CGGGGAGCGGGGAGGCGGTCCGTCATGCT 8297 27 82.8 0 ...AC...............A..-.-... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 93.1 32 GTGGTCCCCACGCCCGTGGGGGTGAGCCG # Left flank : TCCGATGCCCTCGGAAAGGCCGATGATCTTCCCGAAACTTCGGCATGTATTCGGCACGATCAACCGCCAGAGGCCGACGACGATCGTTGACGGCCGGACAGCAGAAGAGCGCCTCAGGCCACAGAAGTGCAGGTCAGAGGCGCTCTCGTAGAGGTCATCTGGGGTAGGGCGGGCGGGACTCGAACCCGCGACCAAGGGATTATGAGACACCAGGCCAATGAGGCACACCAGCGGTCTCTACCTGGCCAAACGCCTTCTCCCACCCCCGTCCCCCTGGTTTGCGGGAAGACATTGGGAATGATCATGACCGGTGAAGGCTCCAAGCGTGATCAACGAGGACTTGGTACAGACCCGCCTCCACCGGGCTCAAACTTCCACCCCTGACCTCTTCAATGCCCCGCGGGCATGGCAGTGGGCTACCCGTAAGTCAAGTTCACGAACGGCTCACCCCCACGGACGTGGGGAGGACCATCGACGCGTTCGAGGTCGCGTACGGGATC # Right flank : GATAACGGTGCGTCCGCCACGGGTGTCGTCTGGATCCTTCCTGTGCCCGTTGTCGCGGAATTCTGAGACTGACTCCATGGGTGCGCCACTCTAAGAACAGCCGAAAGGATCTAGCTATTAGTCCTCATGAACTCGCATCAATGGTGTGCCGGTCAGGGTTTAGCAGGTTTATGCCATCGTGCTGGCGGATGGCGGGAACCCTCGCGAACTTCATTGCATCCAGGACCCGAACAGCGAATGCTTCCGATGCCAGAGCTCGCACTTCATCAGCGGTGACCCATCGGAAGGCACGGGACTCATCGGTTTCGGCCAGACTGCCAGTAACTACGCGGCAACGAAAAACGAGAGCGACGATGCCGCGAGGCATGTTCTTGTAGACGCCGGTCAGCGCGACAGGATCGACTTCAAGGCCGGTCTCTTCTCGGACCTCGCGGATCAGGCCGGACTCGATGTCCTCGTGTCGTTCGAGGATGCCGCCGGGGGCTTCCCAGTGGCCGTTG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCACGCCCGTGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 22343-22011 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOI01000068.1 Planobispora rosea strain NBRC 15558 sequence068, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22342 29 100.0 32 ............................. CAGCGGGACAGCTCGGCGGTGGCGGTGTGCAG 22281 29 100.0 32 ............................. ATGAGCCACTCCAGCGTCAGGTCGGGGGCGGG 22220 29 100.0 31 ............................. AGCACCACGACGACGCCCCCCAGGCGCCCGA 22160 29 100.0 32 ............................. TTCGACGGGCCGCTGCGGGTTCTACTGTTCGG 22099 29 100.0 32 ............................. ACCCTCAAGCACGGCTGGGGCGTGGCCAAGAC 22038 28 86.2 0 ...........A..T......-...A... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.7 32 GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Left flank : GTACGAACCGTCAGTAGCCGTCACCGACAACCGCCGCTGACGTGCGGAAACGGCCCCGTCCGGCACCGCCGGTCATGGGCCGTCACGGGGCGAGGCACGCTCATAATCCCTTGGTCGCGGGTTCGAGTCCCGCCCGCCCTACCCCTGCCAGCCTCTACAAGAGTGCCCCTGACCTGCGTGTTTGCACCCTGAAGATCTCTCGCCGTATCCGGCGGTGTACGGCTGTCGCCGGGCCATTGCGGCTTGCTCTTCCCAATGCCTTCCCGCAGGATCATGCCTTTTGAGTGCCTTGGGAATCCGGCGTCGGGCGGCCTCGTCCTAACCTACGATGCACTTGGCGTAGATCCGTAGGAGGACGTTCATGCTGCGGCCGGCCCACTGGACAACTCTGGGGCGTGGAGGCCTCAGAGTTGTGTCAGGCCGACACACAGGCGTGTTGGAAGTCGTAGACCTTCCCTCGGAAACTTCAAGTGTGATTGTGAAATAGCAGGTCGGGAAGT # Right flank : AATCGAATCAGGACAGCGTAACCCTGAGACGCTTTCGCTGTGTTCGGCTGTCGTCGATCTCCTGCGGTTTTCCCCAATGTCTCTCACAGGATTACGTCTCCTTGAGCGCTTCGGAGATCCGGCGCCGGGCGGTCTCATCCTGGCCCACGATGCATTTGGCGTAGATCCGTAGAAGGACGTCCACGCTGTGCCCCGCCCACTGGGCGACCTGGGGCGCGGGAACCCCGGCGTTGAGCCAGGTCGACACGCAGGCGTGCCGGAGGTCGTAGATCCGCCTGGCCAGAGGCAAGGCGACCTCCTGGGGGGTGAGGGCCTGCTCGCGCGCCGCTGCCCACGCCCGCCGATAGGTGATGGCGGGCAGATCCCCACCCTTGACCCCGTAGAACAGTCGACCGTCGGGGTCATCGCCGAACTCGGCGAGGTGCGCACGGAGAATCCTGGTCAGCTCCGGTGGGCACGGTACGGAACGCGCCTGCCCGTCGGCACGGTGCTTGAGGGAA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCCCGTGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCCCGTGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 36626-37261 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOI01000076.1 Planobispora rosea strain NBRC 15558 sequence076, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 36626 29 73.3 31 .G.A..AT.-.C.G...............T CGGCCGTACCGGCGGGGTCCCAGCGGCCGAT 36686 30 100.0 31 .............................. ACCGCGAGGCCAAGGCCGGGATGGAGCAGCG 36747 30 96.7 30 ............................G. TCAAGGCCGCGCTCGACGTGATGGAGACCG 36807 30 100.0 31 .............................. ACTGGGACCTGTCAATCAGCTCCGTCGGCAA 36868 30 96.7 31 .............................C TCGTCGTCAACATCGGCGCCGGGTACGGTCA 36929 30 96.7 31 ...................T.......... GGTGCCCGCTGATCTCGGAAGGGTGGCAGTG 36990 30 100.0 31 .............................. GCCCTCCCGCCCCTCGTCCCGGGATGAGGTG 37051 30 96.7 31 ............................G. AAACCGAGGTCCTCAGCCTGGTACACGGCTG 37112 30 96.7 31 .......................A...... CGCCCAAGCACTGATCAAGAAGCACGGGTCG 37173 30 90.0 29 .................A.........A.T CACAGCCTAATCATCCACATGCAGGCTGA G [37196] 37233 29 70.0 0 .A.....T........TAA....-..G.GT | ========== ====== ====== ====== ============================== =============================== ================== 11 30 92.4 31 GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Left flank : CGGCCGTCGTCTTGATCAGAAGCTGCCACTCCTCAGCTGTCTCCACCTTTCCGTCCCACCAGTAAACGGAACGAATCGGCCCTACGATCTGCACACACGCGGCAAATCGCGCCTCTGTGATGCTTCGCGCCAGGCTTTCCCCAGATTCCGGGCTGTCAACAGTTGTTAGGGCCTGTATGTACTCCATCTCTTCCCCTCTCATCGTCCCCGTGTGCACAAGGGGCACTCTCCCACAATAGAAAGTCAACTGACACTTGGAATCATCCCCGCGTGCGCGGGGAACACCAGGTCTCCGATCAGCTCAGCGGGGCGACGAGGGGATCATCCCCGCGTGCGCGGGGAGCACCCCCACTTCGCCCGCAGCTTCTCCGCCGCCGCGGGATCATCCCCGCGTGCGCGGGGAGCACGCCGCCGCAGGCGACCCCATCGGCTGCTATGAGGGATCATCCCCGCGTGCGCGGGGAGCACTAGCGGCCGGCGCGGACGTCGGCTTCCTGGTC # Right flank : TGGTTGCGTCATCCACCCCTTTCCTAAGCGACTCCGCTGCACACCGTCCTGAGTCCGATCCCCGATTCGAAGCGGATTCCGACTTGAACATACGCCGACGAGATCGGCTCGGAAGACCTCCGTGAGTACTTCGTATGCTGTTACTGCATGGATGTAGTTCTCGGCAGGCACACGGTTGTGATTCAGTAGCGTGATCTCGGCCGAGATGTGGACTGCGGACGCCTTCGAACCCTTCCAGTCGTGCGGCGTCGAGGCGGCCGGGAGTGGTTGAATACTTGTTGCTCATAGGATCCTCTCAACTCCGGGAGGCCACGGGAGCCAATTGTGGGAGCCACCGCCTTGCGGCTCCCCCAGACTTCCCGTGTCCTCCCCGGAGTGTTCTGTAAGGTGAGAGGCACCCGATCGACTCAGATCGACATGGTCAGACTTGCCTGTTTACCTTCGCATCGAAGGGGTCAGGGGTTCGAATCCCCTCATCTCCACCAGGACGAGAAGGTCCG # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //