Array 1 28839-21457 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAMM010000014.1 Sulfolobus islandicus strain REY15A EndoMS Knockout Scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 28838 24 100.0 39 ........................ AAATTCCAATTAATTCTACACCTTGTAAAAATATTCCAA 28775 24 100.0 40 ........................ CTCTTGTAAGCTTTAAGAATTTCAATCTTTTTATTTTCTT 28711 24 100.0 39 ........................ TGAGAAAAGATAAATGGTGAAAGAAATGAGATTTAAAGA 28648 24 100.0 40 ........................ CTGGTCCTCCTATGGACCAAATATAATATATTATATCTAG 28584 24 100.0 42 ........................ CTTTCCATTTTACTATTTCAAAGACCTTGTCGCTGAGAATAA 28518 24 100.0 40 ........................ GTTGGCATAATCCTCAACATACTTTCTTGTGTCGGGTATG 28454 24 100.0 39 ........................ TTTAGAGTTGGAAAACAACAATCAGACATTTATTGACTA 28391 24 100.0 39 ........................ TTGTATATCACTTTTTCCTCTTTCTTGAAGATAATTTAT 28328 24 100.0 39 ........................ TATTATTCTCCTTTTCAGATCGTTTTCCTTTCTGTTCTT 28265 24 100.0 40 ........................ GGTTTGAACTTCGAAATTGACGGTGGTGTTGTAGTTTCTT 28201 24 100.0 40 ........................ TTCCTGTTTATTCTTATCCTTTAGAAATTCCTGCAAAGGC 28137 24 100.0 39 ........................ TTCTTTATGAAGTTCGACAACGGTAAGCTAGACTTTAAA 28074 24 100.0 40 ........................ AGTAGTGCAATAATCACAGTAATGGCAATCCCTATCAGTG 28010 24 100.0 41 ........................ GTCCATTTCGTTCAATAAATTATCAGAAAAAATAAAAACTT 27945 24 100.0 44 ........................ CCTAAGAAATATGGTTTATCGTTAGGTGGTGGGGTTGAAGTCGT 27877 24 100.0 39 ........................ CTCTGTAAACTGGGGTGTTTATTCAGTTTTTGTAACGTA 27814 24 100.0 40 ........................ GCGATATAAATCACACCGTTAAGGTACGATACAAAGTTGA 27750 24 100.0 40 ........................ CAATAGTGCGAAAAACTGAATATATGATACTTTGCAGCCG 27686 24 100.0 44 ........................ AACAAAATAATTATCCTCCACCAATAGGTGGGCTAACTACATCT 27618 24 100.0 40 ........................ CAAATTTTTAAACATATTCCTGAATTTGTGCTTTTAATAG 27554 24 100.0 39 ........................ TAAAGTTATCGATCTGCTCCGGTAGGAAGAAATAGACGT 27491 24 100.0 42 ........................ CAAACGAATAATTAAATAGACAGAGGGGGAGAGTATGCAAAA 27425 24 100.0 40 ........................ GATTTTCTTGCCTTAAAGTATGACACTAGCTATAGAGTAA 27361 24 100.0 43 ........................ GGATATACCGTATTTCTCAGTGATTAGCTCTAATTCGGCGTAT 27294 24 100.0 40 ........................ TTCTAGTTGACGCTAACGACAGAAACGACAGTAGTTTCAG 27230 24 100.0 41 ........................ ACATTTTTTTGATGTATTCTAATGTCTTACTCATATTTATG 27165 24 100.0 42 ........................ ATTAGAGTAAACATTGATTGGGAAGATTTCAAGAAAGATCAG 27099 24 100.0 37 ........................ TAATTTTCTCCCTTAACCTAAAAATTTCTCTTTATAA 27038 24 100.0 42 ........................ CATCTGGCGGTATCTGTTCACGTTCTTCTATTGGTATATAAA 26972 24 100.0 41 ........................ GAATAACAAACATAAGCGTCCGCAGTGCATGCTGAAATTGT 26907 24 100.0 39 ........................ ATCAATGTCATGGACAATCTAGATTTAATTCCTATGGAG 26844 24 100.0 41 ........................ AATGAAGAACCTAGCCACCACCCAATTCCCAGCATTGCGAT 26779 24 100.0 43 ........................ TTGACAATCTTTTGTTGATGATTAACGTTAGCAACCAAATTAT 26712 24 100.0 40 ........................ CTCGCTAAATAGCTAATTAATGCGTAACGAAGTGAGTGTG 26648 24 100.0 39 ........................ ACTATTATCGCATTTTCTTGGCTCGTCATCCATGACAAC 26585 24 100.0 42 ........................ TCTAAAGCTCTCGTGTAACTCAGAAAACGTCCTACAGTATAG 26519 24 100.0 46 ........................ ATGAAAAAAATTATTTTTCGTTAATCTCTACTGGATAGATCGCTCT 26449 24 100.0 39 ........................ GGTTGAACAATTAGTGTATGCGATAAATCCAAATACCGG 26386 24 100.0 40 ........................ ATAAAAAATATAGAAATTATGACATTGTAGAATTCCTTGA 26322 24 100.0 47 ........................ CCGACCCTTCTCTGTAAGCTCATAAACATAAATCCCTCTTCTGACAG 26251 24 100.0 42 ........................ ATTGTGCAGTCTGTTGCGGAGAAGTTTGCCATATCGTCGCGT 26185 24 100.0 45 ........................ AAATATTGTTGTAGTGGGCACTGATCCGCCTACGACTCCATTACC 26116 24 100.0 38 ........................ CAATAATTGATAAAGTTCCGCTGTGATTCTCTGACTTA 26054 24 100.0 40 ........................ GAAGCTTCGGCACTGACTTTACTGTTGTGATAATTACTAA 25990 24 100.0 40 ........................ GTTAATGATTTCGCTCCTAAAAATCCACTATTTAGACCAG 25926 24 100.0 41 ........................ TAGAGGAGAAGACAGAGAGTAAGTGGCGGGGTCTGCAAACC 25861 24 100.0 39 ........................ CTTCAAATTCTACTATTTCTTTCTTATTTTTTCGTGACC 25798 24 100.0 40 ........................ TTTTATTCTATGTGGAGATGGTCAAATATAGAGTTCTCAT 25734 24 100.0 42 ........................ TACCAAAATGATAGGTACATTTGCCACTCTGAAGAGGTCTTT 25668 24 100.0 45 ........................ ATTACTTCTATGCTGTTCTTCTTCGACCCGACTTACATAACCCAA 25599 24 100.0 40 ........................ CAGATGTACAAAGTAAATCCAGGGAGGATTTAACACATTA 25535 24 100.0 41 ........................ TCAGTTACGTCTAATATTAATCGTACTAATGGCTCTAATTT 25470 24 100.0 42 ........................ TTCTTGATAAAATAGAAAGGATTGTAAAATGATTTTTATTTT 25404 24 100.0 39 ........................ ATGATTATGAGAAAGCAATAGAATTAGATGGTGAGACAA 25341 24 100.0 40 ........................ TTAAATCGGACTGAAATTATCACATAAAGCTGATAGTGAA 25277 24 100.0 40 ........................ GAATTCTTTTTTCGAATTGCTAATCTTCTTACATTCCTGG 25213 24 100.0 39 ........................ AAGACTGATAACATATGGCGACAAAAGCGTAATTGAAGT 25150 24 100.0 39 ........................ CGCTCTTTACCGTACGGGTCGCCACTCCGTACGGTAGCA 25087 24 100.0 40 ........................ AGAGGACACAAGTTTCATAGTGACCTGAACGGTGCTTTAA 25023 24 100.0 40 ........................ AAAAGCAGAGCAGTGGTCTTATTGCATAGAAGCAGAAATG 24959 24 100.0 39 ........................ AGAATACTAATTGTTATAGAATCATTTGGCAACCTATAT 24896 24 100.0 38 ........................ TATTTTTTAATCACCACATGAATCCGTTAAAGAACTCA 24834 24 100.0 39 ........................ TTTTACCCAATGCACCGTATTTCTACTATATACTCCCAA 24771 24 100.0 40 ........................ TTCATTACCTTTTCCATGGGTTTGGATTTGTTTTGGGGTG 24707 24 100.0 42 ........................ CTATTTCACGGAGATGCTGAAGATCCTTTAACAGCTCTCCCT 24641 24 100.0 41 ........................ TACAAAATACGAATTCTCTATTATCATCAGTTATAAAAGTT 24576 24 100.0 42 ........................ GTGACCGCTAACAACAAAAGTATGAAGAAGGCCGCAGCACCG 24510 24 100.0 37 ........................ CATCCTCGTGCTTGAATGTATGGATACTTATCAACTG 24449 24 100.0 39 ........................ TTAAAGCTGCCAATAGGATTTGTAACAGTTGTACTACCA 24386 24 100.0 42 ........................ TCTTCTTTGTCATCTTCGCAGTCGCGGGGCTTATCGCTTATC 24320 24 100.0 40 ........................ AAGCCGATAGCAACCCCTATGCCTATGCCCATTATTACCC 24256 24 100.0 40 ........................ GTGGTGGTGAAGATGAAGATGGAGGAATTCCCCATGAATG 24192 24 100.0 42 ........................ TGATTTTAGGATCAAATTATGGAGTAATTCTCCATTCATATC 24126 24 100.0 41 ........................ ACTCTCTTTTTTAGGCGTTTTTAAACCTTTCCCTAAACTTA 24061 24 100.0 40 ........................ TAGTATATTCCCCACCGCCAACGGTCAACAATCTCATCTA 23997 24 100.0 40 ........................ GAAGTCCTTCGCGGTCTGGGATGGCTAAATAGCAAAAATG 23933 24 100.0 41 ........................ CAATTCTGCCCAATTTCGTTCAGGTCCTTTCAGATCTTTCT 23868 24 100.0 41 ........................ TTTCATCTTTCTGGGCAGACTCAAAAAATCTAATCAATAGT 23803 24 100.0 40 ........................ TATTCTGTCTTCTAATTGTTTATCGTCAACCGTTAATACC 23739 24 100.0 42 ........................ ACTAATATCAATTATCAAAAGTATAGATGAGGAGAGACCTCG 23673 24 100.0 39 ........................ ATACTGGGAAGCATTTTTATTAGTCTCCCTACCCTTTCT 23610 24 100.0 40 ........................ TCACCCTCAACAGTGACAATTTTTCCGTTTAGTTCTATGG 23546 24 100.0 42 ........................ AACGCTATTTCTTTAATTGTAAAGCCCTCGCGGGCTAATAAA 23480 24 100.0 40 ........................ TCGCAGATAATTGCAGAGGCTAAGAAGGCGAGCGATTATT 23416 24 100.0 40 ........................ CTTGATCCTTCTTGAAGTCTTCCCAATCGATATTGACACG 23352 24 100.0 41 ........................ TTTAACTCCCCAGTTTCTCTCTTTATTCTCTCTATTATCAT 23287 24 100.0 40 ........................ AGAGACTCGGGGATATGTAGGATATTTATCGCACCATTCA 23223 24 100.0 39 ........................ TCCAGTCTGCAATGTCACGGAAGAACTTTGCGACGCCTA 23160 24 100.0 41 ........................ TCCTTTCCAATTACTTCAATTACAACTCTATTAACAATATC 23095 24 100.0 39 ........................ ATCGATTACCGATATTCTGGCCCCCCGGCCAGAAATTTG 23032 24 100.0 39 ........................ TATTTAAGAAGAGATAAGCGGCGAAAAGTTTAGGCAATT 22969 24 100.0 39 ........................ CCAGAGTCCTTGTCCCAAGGTATATAGCTACGAGTGATG 22906 24 100.0 38 ........................ CAACAGGACTTAACTAAGATTTGTAGTAGCGAATTTTT 22844 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 22780 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 22715 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 22648 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 22584 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 22519 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 22452 24 100.0 41 ........................ CAAATTCATCAATTACAATTTATATGTTTGTAAGAAATTCA 22387 24 100.0 39 ........................ TCTAGGTTTAAGACTTGGCTCAGAACTTTAGTTAAGTAA 22324 24 100.0 43 ........................ CAGTTTTTCCAAAGAAGTTACAGGTATAGACATATCGGGCGTG 22257 24 100.0 44 ........................ ACTATAATGAATTAGATCTTTCCTAGTTCTGCTTTGTATATCCG 22189 24 100.0 41 ........................ ATCTACAATATATTGTTTGTTTGGTGGTATATAAAGTTTAT 22124 24 100.0 39 ........................ GTAATTCTTCTTCAGTCGGTAGTTCGTTTGAAGCCCCTA 22061 24 100.0 41 ........................ TTCTTTTTACTAAATACGAATAATCCAATCAGTGACTCCTT 21996 24 100.0 38 ........................ TAAAGTGCAGACTCACTAACTCTCTTTCAGTGTCCCAG 21934 24 100.0 38 ........................ TATCAATTTCCACCACATTTACCCAAAACTCATTGCCG 21872 24 100.0 44 ........................ AAAGTTCTTATGGCAAAAATTAGGAAAAAACTCCTCAACTACGC 21804 24 100.0 39 ........................ TTCTTCCAGGGTCTGTCCTTCTGATTTTGTACATCTCTC 21741 24 100.0 41 ........................ AGAGATTTCCGAATTCCTGAAAGACAGAAAGTTCACCGCGT 21676 24 100.0 40 ........................ TGCCATCGAGTCACTAGGGGCATAAGTCAAATCGAACCCT 21612 24 100.0 42 ........................ GACAAAGTTAAAGAAGAGGCAATGAGACAATTTTCATTCTAA 21546 24 100.0 42 ........................ GACTATATAATAGCACAAATTACTTATGATCTGAAACAGCTG 21480 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== =============================================== ================== 115 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TCAGACATGGACAAGCCTAGATATCTTCTGGGTTTTATTGGAGGCATATGATAATTCCAACCCCTTAGTTCCTCCTCTATAGGGTCAGAAGCCCTATAGGAGTGAAGCCTCCTAACCTGTCTAATTATCTGCGACCTCACATTATACATTATGCAAAAAGAATCTAAAATACACAATAATGATCCTTGTAAATTTCTTCCCGACTTTAGTAAGGATAATCTTAATAAACGACGATTTTCCTCTTGATGAAGAATAATGGAAAATATAGGGAAAGTGTTCTCCCGTATACGATCCTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : TCATACGTTTCCCCGACTACACACCAAAGGAATAAGGTAATGGTTTCCCTATTAATGGAGCGGGTAATATTCTAGTAAGAGTTAAGAGTAGGTAATTTATCCACCAAAATACTAAGTTAAGCACGTAAAGTACCTTGAGGTAAGCAAGCTTGAAAATCATGATCATAATTATCCCTGCAACTATTGCAATTACTGAATCTATTACGAAGAATAACCTTATTCCGTAAGGTAGTAAACTAATGTTATATAATGGAAAATGATCGTAGGCCCAGATGAAAGATAATATACCTCCTACAACTCCCAATATAATTGAATTTTGTTTTAGCATGAGCTACTCTTCTTACCCTATTTTAAAATCTCTTCCCAAATCTAAAATTAAATTACATAAATTGGGAAAAGATTTATATTAATTGATGAAAAGATTATCTCGATAGAAATGGATAAGAAAAAATGGTCCTCTTAGGCCTCTCTGCAATAATCCTAATAATAGGAGGAGTTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 2 32890-38877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAMM010000014.1 Sulfolobus islandicus strain REY15A EndoMS Knockout Scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================= ================== 32890 24 100.0 39 ........................ ACACTGGGCGATAACGGGAACGACAGGGGCGGGAAAGAC 32953 24 100.0 40 ........................ TTTATTTTTTCAAACTAATTCGCAAAAATTGAAAGTCGAA 33017 24 100.0 41 ........................ TATAATTATCTTTAGTCTTCCATCCATGGTATTTCAGAAAA 33082 24 100.0 44 ........................ TATAAATATGGTGTCAGTGACGAATTAAAAATAACATAACCAGT 33150 24 100.0 40 ........................ TTACTTCTTAGTGTTTTTACGAAAGTGAAAGCATTATCGC 33214 24 100.0 42 ........................ TCAATATATCTTCCAATGCTGTTTTTGATATAGTCGACAACC 33280 24 100.0 42 ........................ GAAATAGAAAAAAGCTTTAAGAATTAAATATCTCTTCTGCCG 33346 24 100.0 40 ........................ AAAGAAGATCAAGATTTAAGATATGTAATGACCTTTGGAC 33410 24 100.0 39 ........................ CAACTTTAACACCAATTTTTTGGTTAATGGCACATAAAA 33473 24 100.0 40 ........................ TCATCTAAAACGTAGATATTGTATAATGGGGGCATTCTAT 33537 24 100.0 37 ........................ ATATTGCTTTAATCCTCGACCTACTGTCCTTAGTTAT 33598 24 100.0 39 ........................ CACTAATTATTGAACTAAGATGGGTTTTGTAAACTGTCC 33661 24 100.0 41 ........................ AAAAAATAGATATTACTTTATGCTTTGTCTCCTAGAGCGAA 33726 24 100.0 39 ........................ TATAATAAATATTATGTATATGGTTTGATTTACTTGTTA 33789 24 100.0 43 ........................ ATGTTGATTATAGTTAACTGTCCATTTTGATAAATTTCTATTC 33856 24 100.0 40 ........................ TTAATTTTATCATCACCCTATTTTCTCTTGCTAATAACTT 33920 24 100.0 42 ........................ AATGTATACACTTGATAAATTGGAATTATAACTTTCAATCCA 33986 24 100.0 38 ........................ GTCTCAAATATGTAGCTATTGCTGAACGTTATGAAAAA 34048 24 100.0 40 ........................ TGACTGTTGATATAAGCCGTATCATTAATGCGTATAAGGT 34112 24 100.0 40 ........................ TTATTATATACGATAATATCATAGCCAACGTCTTTCAACA 34176 24 100.0 37 ........................ CCACCTGGCGTGATATAGATATTCTTATATTCAAGCA 34237 24 100.0 37 ........................ TTACTAAGAAATACTGAACCATACATATTATTTCTAG 34298 24 100.0 45 ........................ ATTATAGAGATATGGACTCTCACAAACAAAAGAACTGTAAACTGG 34367 24 100.0 42 ........................ ATATTGATTGATTAAAATAGCGTTGTTTAGATAGTTGTTAAT 34433 24 100.0 44 ........................ GTTATCGTACTTAATTAATATGTTGAATGGTAACGTTATGTCTA 34501 24 100.0 39 ........................ TCATACACCTTGTGATTAATTTTGTTTGACTTTAACGCT 34564 24 100.0 40 ........................ AAGTTTATTACCATTTTTGCTGAAAACGAGGATGAGGCAA 34628 24 100.0 45 ........................ TTAACACTAGAATTTTAACGTCTTCGTCACCGATATGATATTCCT 34697 24 100.0 44 ........................ CTTGTTCTTGTACTAGTTGGTCTGGCACCTCGACTATAACTTTG 34765 24 100.0 43 ........................ TCATCAGAGACCCCATCCTTAACTTTCTCATCGCCTTGGAAGG 34832 24 100.0 41 ........................ TCTATTCTTCCAATACCTCTCTAATTCTCTAAATTCCTCCT 34897 24 100.0 38 ........................ AGTTCATAGAGCCCTATGGGAATCCCTACTAATCCCGC 34959 24 100.0 47 ........................ TTTGTGCTATATATAATGTAAGCTTCTGATGAATTGAAAAATATCTG 35030 24 100.0 42 ........................ TTTTTCAGCGTCAGGCCAGACAGAAGCGATAGTTCTATTCCT 35096 24 100.0 41 ........................ TTCTCTATTCCAGCCATCTCAACAACTCCTCCTCTTTAACC 35161 24 100.0 42 ........................ GTTTCACTAGACCGTGACTGTCGTTTAGCTCCAGCGGACTCG 35227 24 100.0 45 ........................ AAAAATATTTATAGAGAGAGATGAGTGAAAGTATATGGCAATAGG 35296 24 100.0 39 ........................ TTTTTCAATATAAAACTACATTCCTGCCATGAACCATCT 35359 24 100.0 42 ........................ GAGAAAGATACGTGTTATCTATTCGTAGAGCTTCTTATTCCT 35425 24 100.0 41 ........................ TCGTTTTTTAGGGAAGAGTTTGGCGAGTGTGCAGCTTATTA 35490 24 100.0 41 ........................ TCGCTATTATTGTCAAAGAAATAATATACTTTTATCTCCTG 35555 24 100.0 39 ........................ TTTTTATCAACAATAACCTGAAATTCCTCGAATCTAAAT 35618 24 100.0 43 ........................ CTCAATATTTTCAACCGACTGGAATAATATAATAAATCTGAAA 35685 24 100.0 39 ........................ TCATTTCCTAAGATCCCTTACATTTTCCAAGTAAGAGAA 35748 24 100.0 38 ........................ TTAGGAGTCGTAGCACAGGGAGCTGTACAGTCACAGAA 35810 24 100.0 39 ........................ ACTATATACTCATAATCTCCTATTATTTGCCTCTCGGCA 35873 24 100.0 39 ........................ TAAGTGTTACGATCTTTTTTACCGACCCTTTTTCTGATT 35936 24 100.0 38 ........................ ATTCTGTTCTTTGAGAACGGGTATGAGACTATCTTTAG 35998 24 100.0 40 ........................ AATATAATTCTTGTAAGCCTAACACAATTTTTCTAACTTG 36062 24 100.0 41 ........................ ATTCTGTTGTAATAGTTCTTGTAATTCTTGTAATGTTAACA 36127 24 100.0 40 ........................ TCACTCTATTAGGCTATTGTTGTTTGTGCTTCTTCCCTGT 36191 24 100.0 40 ........................ AAAATGTTAAACATTCTAAGATCTTGAAAATCTGTTCTTG 36255 24 100.0 39 ........................ TCTTCTTAGTTACTTTGTTTACGAAATCAATTGCATCCT 36318 24 100.0 37 ........................ ATTTTGGGTTGAAAAATAATTATATAATTAATAACTA 36379 24 100.0 43 ........................ GGCTGGATAAACTGCACGTGCACCGGTGTTTGGCTAGCGGGCA 36446 24 100.0 44 ........................ GCGGGAATTGGTGTGGAAACTCTATCACAATCCACCTTCTCCAG 36514 24 100.0 43 ........................ ATGGAATTCTTTCTATATACGCGACCTTTAGGATAACTATAAT 36581 24 100.0 40 ........................ GCTAGCTGCGAAATTTGTATCGTTAGCTCGTAAGGCAGAC 36645 24 100.0 42 ........................ CATTGACCTTAAACGTTACAACTCTCACGGGATCACCTCATA 36711 24 100.0 39 ........................ TTATTTTATCAGTAGGTACACCTCTGACTATTTTTAATT 36774 24 100.0 41 ........................ ACACTGTATGTTATGATATGAAAACCTGGAAGGAACTCGAT 36839 24 100.0 44 ........................ TTTTGATTTATTTATACTGTTTATTAACCTTAAGATTTTTTTCA 36907 24 100.0 40 ........................ AGGAATGTAAAATGTACCGCCCTAGGAAACACGAAACTCC 36971 24 100.0 44 ........................ TCGGAAGAGATAGTTAATTCAATAGTTGTTTTTTCAGTCTTGGT 37039 24 100.0 37 ........................ AACGGTAAAAACGCGTAAAACAACCTATTTTGGGTTG 37100 24 100.0 41 ........................ TTCTGCACTACTCCTAACCTTAGTTAATACGACACCTATTA 37165 24 100.0 43 ........................ AATTTAATTTCCAAAATTACAATTCCTAATGGAATAGCGGGAA 37232 24 100.0 40 ........................ TTAATTTCAACAAAGAAAGAGCCGAATTACTTAACGATCT 37296 24 100.0 42 ........................ TATACTGGAATGAACCCAATACTAACTTCTACATATGCACAA 37362 24 100.0 38 ........................ GCAGGGTTCGTAGATACTTAAAAGAGCTGTACGGGGAA 37424 24 100.0 41 ........................ TCCTCTGATGTTGGTGCTAGTTTTACTATCAGCGATGGCAA 37489 24 100.0 39 ........................ AATTTGCATCTTTATATAGAGAGTACAAGTTCTTTATCT 37552 24 100.0 40 ........................ TTTCCAGAACACGAATCTCGTCTTTTAGTTTATTTAATTT 37616 24 100.0 43 ........................ TAAATTGTATACATTTCACCTGCTAATTTATATATAACAACAT 37683 24 100.0 43 ........................ ATTACTGGATCTTTGAGTCCTATTATTCCTATTACTTTGTTAT 37750 24 100.0 42 ........................ ATGATCATACATCATGTCATAACTTTTCATGAGTTTCTACGC 37816 24 100.0 41 ........................ TTAGCAATAATTACGCCCGAGATCATAGGACTGGCTTATGG 37881 24 100.0 39 ........................ TCTGTTACGCCGAGTGCCGGTAACACTTGAGCCATTTGC 37944 24 100.0 39 ........................ CAGTTAATGTCGTTAAGTTCTAGGTTTAGCAAAAGTCGA 38007 24 100.0 39 ........................ TATATTAAGGAGATTCCTAATTCTGAATGCTAACTCTTT 38070 24 100.0 37 ........................ GGTCTAGCCGTAATTAATGGGAAAAATTGATATGACT 38131 24 100.0 40 ........................ TTTGTAAATTGTATTATATATCCATTCATATCTACAGATC 38195 24 100.0 40 ........................ GCTCCACCGCCTTTTACCATTCCCTGAATATGATAATAGT 38259 24 100.0 41 ........................ CTTTCTTTCTGCTTTTCGTACTAGGTTTTTCTTCTTTTTCT 38324 24 100.0 39 ........................ AAAGTTTCACCGAGTGGTCTATGGTTATTAATAAAATAT 38387 24 100.0 49 ........................ GAGTAAAATCCTAACTTTGAAAGGTAGGCGTCTAAAAAATTGTTGTCCA 38460 24 100.0 45 ........................ AAAAAAGACTTAATAGTTACAGCAAAAATGGTCAAAAAAATACAG 38529 24 100.0 41 ........................ ATACTTTTTAACGTTTTCATTTATCATGTTTCTATCACTAA 38594 24 100.0 42 ........................ CTCCTTTTTCTCCTATAGTAGGAATAGATAAACAACTTCGCT 38660 24 100.0 39 ........................ TTCGTACTGTCCTCTCAGCAAAGCCCTATATTTTTTCGT 38723 24 100.0 42 ........................ AAAGGAACACCAATTCCTATTCCTACAGCTGCAGCTGTGCCG 38789 24 100.0 41 ........................ TTATTGAATAAAACAGAGTACAAAATATTTAGTGGTGATAA 38854 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================= ================== 93 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TACTAATTTTAATTTCAATAATTTCCGGATTAGGATAGCGAAGTCGTAGAGTTTGGATTTTTAAGTTTTCTATAGCGGCTTTAGTTCCTTCCACTATGGGACTAGGAACTACTATAAGTAATTTATCCTCCTTTTGAGCCGAAGTCTCATTAAGAAGTCTTAGAAGATAAGTTTCATTAAATCCCAAAGTTACAAAGTATGACTTCATCATTATATATGGTAATATCATAAATAAATAATTTTTGATTACTTTCGAGGAACTCTAATTACAATTTTTGTTCCCTACTATTTCCGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : GTATTATGGCCTATGATTTTGACACACTTTCCTCAATTTTCCTTTCATAATCAAATTATTATATAAATTAATAAATTAAACGAGAAAACTCTTTAGTGAATTTACTGCACGTAATACGGGATATCTTTTTCCGTTGATGAGAAAAATTTAATACTTTATTTTTCGGATTTAGGGTATGATATTACTCTTAACACTTGGCTTTGATGAGAAGTTTCAATACCGTGCGTTAATGAGGCAAGGTAAGAGTATTGAAAAGGTCATTATTGTTGGGGGTTTTGAGGAAGAGAAGGCTAAGAAAGCGTTGGAATCCCTTACCAATTTCTTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAATTGACCCTAGAGACTTTGAAAATATTGTTGAGAAAGTTGGCAAGGTTATTTTAACTAATGCAGGGAAGGATTTCATGGTTAACCTAAGCGGAGGGATGAGATTAATGATTTTAGCAGTATTTTCCGCCTTTTTATTGACTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //