Array 1 3653630-3654138 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJEZ02000001.1 Enterobacter hormaechei strain FDAARGOS_286 unitig_0_quiver_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3653630 28 100.0 32 ............................ AGCAAAAGCGGAAGTTGATGCCACTTCCCCTG 3653690 28 100.0 32 ............................ GCCGCAGGTAAACAATAGCGGCCCGGTAAATA 3653750 28 100.0 32 ............................ TGTAGAAGTCGTGCGCAAACCAACTGAGTACG 3653810 28 100.0 32 ............................ AGCGCGGATAGATGAGGAAACAATCGCCTGAC 3653870 28 100.0 32 ............................ GTCACCGTGACGGACCACCACGCGCTTGTGAC 3653930 28 100.0 32 ............................ TACGCCTTGTCAATTCGCTCCTGATTCTGAGC 3653990 28 100.0 33 ............................ CCATGCAGCTAATAGCAAGTGCGGTTGAGGAAT 3654051 28 100.0 32 ............................ AGTCGACGCGTTCTGACGTTGCCAGGGTGAAC 3654111 28 82.1 0 .....................AACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGTGTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGATTGCCTGGATTTATCGCCTACGGCGTGTTGGTTGGCGAAGTGCTGGTGCCAGTCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGCGAAACGTTCGCCCTCGATAAGGTTGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGTTACGCGGTGGGGAAAGACCCAGCGTGGCGTTGAGGTTTGGGCTCGGGTATGAAGGAAGGGGTCTACGGACCCTTTTTTATTGGCTATTTGTAACTCATTGATTTTATTGTGCTGAAATGTATGCAAAGAAAAAAAGGGGTTGAGACGATTTTTTTAGGTAATTTCTTTATCTGACAAGATGATAGGTGTAGATTGTTCCA # Right flank : ATCTAGTTCGGTCAAACACTGTGCTGCCTGTTTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCTGCATGGATAAAGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGCATGTAAAAAGTAGGCCGGGTAAACGCAGTACCACCCGACAAAAAGCCTGCATGGATAAAGTAGGTCGGGTAAACGCAGTGCCACCCGACAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAACGCCGTGCCACCCGGCAAAAAGCCTGCATGGATAAAGTAGGTCCTTTAAACGTAGTGCCACCCGACAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAACGCCGTGCCACCCGGCAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGAATGGATGAGGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGAATGGATGAGGTAGGTCGGGTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3671985-3672492 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJEZ02000001.1 Enterobacter hormaechei strain FDAARGOS_286 unitig_0_quiver_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3671985 28 100.0 32 ............................ GCGCAGGCTGGCTTTGATGAACGTGAAATCGA 3672045 28 100.0 32 ............................ GCTGGAAAGTGGCTTATTCAGTTCATTTCGTT 3672105 28 100.0 32 ............................ TCTCTCGCACCGCGTGGTGTATGGCCGACATT 3672165 28 100.0 32 ............................ ACGAGCCAAATCCAAGGATGTCATATGGGTTG 3672225 28 100.0 32 ............................ TGAGCGGCCCCCAGCGTTCAGTCAGTTCGTCG 3672285 28 100.0 32 ............................ ACTGCAATGCTACGTTGAAAAGCGAGGGATGG 3672345 28 100.0 32 ............................ CGCCCGCATCGAGAGGAGGTAAAAGCCCTAAC 3672405 28 100.0 32 ............................ TGGTCGATGGTAGATTTGCGGTTACGAGCCAT 3672465 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTCCTCAAACTCAGCCCGTATGCCGTTGCCTTGGAGCTTACCTGGAAGAAGTAAAATCCGGCCTTACAGAATCCATGCGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACCGGGCTACTCCATGACATTACGCATTCTATGGCCGCAGACGTCGTTGCGCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGGGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGGCGTGACCCTTTTTTTTGGTCTATACGTAACGTATTGATTTGTCTGGTGCGGATTTACGTGCCAGAAAAAAGGGTTTTATGCGTATAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTGGTTTCTTTCCA # Right flank : AACGCGCGGCACTCCGACGTTAACTGCCCCACACCACCCTTCTCAAACCAACCCACTCTAAAATATTCACCAACCCAATTTAAAACCTCATCCTATCAAGCCCGCACTCTCTATTTTTCATAAAAAATAAAAAACTCATTCACAAACAAATTATATTCTAACGAATATATTATTCGCAAAAATAACACTTCAGCTAAAAACCTGATTTTTCATCGTATTCTCACGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTTTATCCGTTATTCGCTAACATACTGCGCATTCAACACCCTGAAATAAAAGCCCTTGCCATGCCCGTAAACAGCATCACTCCTACAGAATTAAAAACCATTCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAGAAATGTCGTGTTCAGGTGAATGGTGGACGTGTTGAATATGTGACTCAGGAAGGGAAAGAATCATTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3682355-3683040 **** Predicted by CRISPRDetect 2.4 *** >NZ_NJEZ02000001.1 Enterobacter hormaechei strain FDAARGOS_286 unitig_0_quiver_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3682355 28 100.0 32 ............................ AGGAGCGAGGCCTTGACCTCTGGAGTCAGGTG 3682415 28 100.0 32 ............................ ACCCGCTTCTTTAAAGAGCAGTTCTTCACGCC 3682475 28 100.0 32 ............................ TAGAAGAACACCGCTCTCACCCATCAATAAAT 3682535 28 100.0 32 ............................ ATCGCGTCAGGGCAGTTTAAGGCTGCCGCCGC 3682595 28 100.0 32 ............................ CATCCACGTTGCTTGCATGCCTTAAACAGCCC 3682655 28 100.0 32 ............................ AGCCGCGCTTCACCAGTAGCGGTTCAAGCGTC 3682715 28 100.0 32 ............................ AAATGAAAGTTCTTTGCCAGAGAAATGGCTGG 3682775 28 100.0 32 ............................ AGGGCGAAGGGATGCAGCTGGACTGGAAGGGC 3682835 28 100.0 32 ............................ AGCAGGTATACAGACGGGCGACCGGATGCGGG 3682895 28 96.4 32 .......A.................... AAAGGGATGGATGCCGGACAGCCTGGCGGTAA 3682955 28 92.9 30 ..............CC............ ATAGAAAATAAGGTCTCTCCCCCTTACTTT C [3682980] 3683014 27 78.6 0 C.......T..A....A....C.-.... | ========== ====== ====== ====== ============================ ================================ ================== 12 28 97.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAACTCAATCAGCCGCATCCCCCTGTTTGCAGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTTGCTGGGCGGGGATCCATGTTCTCATGTTACCTCCGGATTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGGTAGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTGAGAGAAGAAGGGCGTTTGACCCTAATTTTTGGAGTGTTTGTAATGCATTGATATTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTTAAAGTAGGGTTTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGAGATATTATTTCA # Right flank : ACGAACCGCCAAATAATTGCTCAAATAATCAACTGCACCACAAAAAAATAAGGCCGGGAAAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGGA # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //