Array 1 4898-6992 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLS01000144.1 Caldibacillus thermoamylovorans strain B4065 NODE_489, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 4898 30 100.0 35 .............................. GCGGATCTAGTGAATGAAAGGTTTGGACTATCCAT 4963 30 100.0 38 .............................. TAAGTATCGACAAAGTAACGAATCGACTCGTTACGATT 5031 30 100.0 37 .............................. CCAAGAAGGGAAGTGCGTGCATAGATGTTTCCAAAAT 5098 30 100.0 37 .............................. AATATGCGGCAGGTCCGGCGGCACAACTCGGGTATTC 5165 30 100.0 36 .............................. ATGGCACTTGGCTCGATCATGACGCGCGAGCCGAGC 5231 30 100.0 36 .............................. AAATCAAAATCAATCTTTTTTAGTTGCATGATAAAC 5297 30 100.0 37 .............................. TTTATTCTTGACGACCTAGAGTCGAAGGATTCGACGA 5364 30 100.0 36 .............................. CGGTAACTCGTGGATTTGACGCAACAACTCCGGAAG 5430 30 100.0 39 .............................. TCTGGCTTCGTGCAGTCTAAGACATAGACACCTTCAGCC 5499 30 100.0 37 .............................. CACCAACATTCAATGTGCAGCACGATAAGACTTCTTG 5566 30 100.0 37 .............................. AAAGGCACAACGAACGTTTTCCAACGCTACCGATTTA 5633 30 100.0 37 .............................. CGGATGATAGCGGTAATCATGTAGACGTCGTAGCCGC 5700 30 100.0 37 .............................. GCAGCGCAGCGGGAACAGGAATTGCAAGCAGTCAAAA 5767 30 100.0 36 .............................. TCATCGGCGACCATTTATCTCCGATTATTCAACGGT 5833 30 100.0 37 .............................. ACGGAAACCAAAATATGGGATGTCATTTAGAATTGAC 5900 30 100.0 35 .............................. CCTGATGAAAGGGTAAGTAAGTGTTTGCGGCTATG 5965 30 100.0 36 .............................. CGGATTTAAATCCGGGAATCTGTGAATGCCCATATT 6031 30 100.0 37 .............................. AAGGTACTCTATTATTTATTTATTTAATTTTAAATCA 6098 30 100.0 36 .............................. CCGGTAAAATATCCCGTTTCGAAAGCATCGTTAACC 6164 30 100.0 37 .............................. TAACGTACTGACCGAATACGCTGACTGCCGGTAGGGA 6231 30 100.0 37 .............................. CTCTTAGCCAACGTCAATACTTTTGTTACGGTTACAC 6298 30 100.0 34 .............................. TTATAACGGAATACCGTTGTGTTGGCAATATTTT 6362 30 100.0 37 .............................. ATCGCTCGCGAGACTAAAAAAGCCCAAGAGAAATTAT 6429 30 100.0 36 .............................. TATAACATCTGAACTGGACGGAAAAACCGTTTCTAA 6495 30 100.0 37 .............................. CTTCTTCCTCATCCTCTTTGAAATTGATGATATCTTG 6562 30 100.0 36 .............................. TTTGCACATTCATTCGTTTTCACCTCCTTCATTTTT 6628 30 100.0 36 .............................. TTGATTTTGTATAATTCGTCGAAAGCGTAGTCCCGC 6694 30 96.7 39 ................C............. GCTCTTACAAGAGCAATACCGGACAAAAATGGTGAAAAG 6763 30 100.0 36 .............................. TAAAGGGAGCAGATGGGATACCGGGTGAAAAAGGAC 6829 30 100.0 35 .............................. ACAATATCGCCGCTACCTAGTAGAATGTCTTTTGC 6894 30 100.0 38 .............................. TTACGAAGAGTCCGCCAAAGACCGTCGTTGACCATTTC 6962 30 80.0 0 ...............T...AT....C.CT. | T [6980] ========== ====== ====== ====== ============================== ======================================= ================== 32 30 99.3 37 GTTTATATCTTACCTATGAGGAATTGAAAC # Left flank : TTCTCGGTTTTGTTGACTCTTCTGTCCTATTGGTGGTAATGATTGCTGGTTCACCTAATAATTTACCCTATTATTTGAAAGTTTTTATTGGATGTCAGGATGATAGAAGCCTTTTGCATTCATCAGGTGAAAAAAGTTGGATCTCCTGTTGCCCCATCAATAATGACGAGATTAGTATTTGGGATTTTTTTAAAACGTGTATAGAATTTACGAGATATTTCTCTGTTTTTGCGGAATGGACCAGTTCTTTCATTGAGAAAAACATCACGTTGTATTCTTGACAAAATGTAATTGGACTAGTGGAAAATTTTTGTCGTCGACCTCCAGTAGTGTACAAACCCCGGGGGATCGACGACAAGTTATTTTGATAAAAAAATCAATAGAAAATGCTTAGATTACGAGTATTTATGAAAATATAATTGCTAGAAAGCCAAATTTTTATTATAATTAACACAAAACCACCAATACAAAAAACCTTATTAAATCAAGGATTGTTTGGG # Right flank : CTCTGTCATTTTCAAACTACCACCTTGTCAATTTTATTGGTCGTATCATTGTTGATCGTTTTTTCCCATTTTAAACTGAGATGAATCATTAGAATTTGATAGCGTTTATTTGTATCGTTTTATATAAAGCAAGGAGATGTTTTAATATGACAACAATCGCATTTGATCTTGATGATACATTGTATGACAGAACGCAACCTTTAAGACAAGCCCTTTTAGAAATTGATGAAGCGAAATCTCTCCCTTTTCATAAATTTCTTAACGTTTTTCAACAAAATAGTGATATTGCCTTTGAAAAAGTGAAAGATCATATTTGGACACTAGAAGAATCACACATTTTCAGAATTAGAAATACGCTTCATCAACTGGGAATTGATATAAGCTTAAGTAAGGCACAAAATTTCCAAGACCAATATAAAAAAAATCAACAACAAATTGAGCCCTTTCCATGTATCTTAGAAATTTTAGACTTTCTTCAGACAAAAAATATACAAACGATA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 21132-23139 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLS01000033.1 Caldibacillus thermoamylovorans strain B4065 NODE_44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 21132 32 100.0 34 ................................ CCAACAAGTTGGGAAAGATTCGGCGGCTCATAAT 21198 32 100.0 36 ................................ TCTTTTTTATCGAAATTATTGATATACATGATTTTA 21266 32 100.0 35 ................................ TAATTTCTCGGCGAGTGCAGACTATTGTGAAGCAA 21333 32 100.0 35 ................................ CAAATACTCATCACCCGGCATAATCTCATTCCCAA 21400 32 96.9 35 ...................T............ AAATAAATGGTTTAATCCACATATGGATCAATTTA 21467 32 100.0 35 ................................ TTCTGCGCTAAGTATTTTATATAAAAGATATAGGG 21534 32 100.0 35 ................................ CAGGTCACTTTTAAAAATGTAAACGATCCTTTGCA 21601 32 100.0 34 ................................ GGACCTTGCACGCCCTGCGGTCCTTGGATAAGCG 21667 32 100.0 35 ................................ ACCCGGTATCCCATCCGCGCCCTTTATAAGCGACC 21734 32 100.0 34 ................................ CCGAAACCCGTCGAACCTTTATAGGTGAAAGGAG 21800 32 100.0 34 ................................ AGAACTACAAAAGATATAACATACCAAAAGCACA 21866 32 100.0 33 ................................ AACCATTCTTTCCAGTAGAACAACATGGATGTC 21931 32 100.0 34 ................................ AGAGAACTGGGCAGATGGAGTTTTAACATGTACA 21997 32 100.0 33 ................................ TGTCATTTGTACCAATACAAACAATCACAATAT 22062 32 100.0 33 ................................ ATAATAGCGTGTACTCTTTGAAAAGCAACATCA 22127 32 100.0 33 ................................ TTGTACACTGTTTGCAGTCGTAAGTGCTTTTGC 22192 32 100.0 33 ................................ AACAGGAACATTTACATTTGATGGTCAATCCAT 22257 32 100.0 33 ................................ TACCTAGCCTAAACTCACGATGGAAAGAATCAA 22322 32 100.0 34 ................................ CACGATAAGTGAAAATAAACGTTACAAACAGGCT 22388 32 100.0 34 ................................ ACAGAGTTCTAAGTGAGTCACTTAATACGGTATC 22454 32 100.0 34 ................................ CTTGGGGGTCCCCTGCGTACCGCACCGGACGACC 22520 32 100.0 33 ................................ CGGCAGACATGCCCTTGAACAACTAGCGTCTTT 22585 32 100.0 33 ................................ AAACAGTGATTTACATGACATTACTAAGTTTAT 22650 32 100.0 33 ................................ ACCAGCAATAACAAAATAATCGGCGCCTTTTTC 22715 32 100.0 33 ................................ GAGCAGCAATCATGACTGGCGGCTTCATCTCGT 22780 32 96.9 33 ....................A........... ATACCAAACTGCAATAATGTTGCCAATATCGTT 22845 32 100.0 34 ................................ GTCAAGCGGATGCATTGGCAACCGAAAAATTAGA 22911 32 100.0 33 ................................ TTGCCAAAGCGTGTCCTGTGTTGTTGCTTGCGA 22976 32 100.0 35 ................................ AAAAGGATAACTCAATCTACTCCCACCTTCCTGCT 23043 32 100.0 33 ................................ TGTGAACCAATTGAATGGGTGATAACCCATTAC 23108 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 31 32 99.8 34 GTCGCACTCTTCATGGGTGCGTGGATTGAAAT # Left flank : ACGTTCTGATTTAGATGAATATCCGCCATTTTTCTGGAAGTAGGTGAGAGATTGCTCGTATTAATAACATATGATGTTAATACGGTTAGTACTTCAGGACAAAAGAGATTACGGAGAGTTTCAAAAATATGTCAAAATTATGGACAACGTGTACAAAATTCAGTTTTCGAATGTGTAGTTGACGCTACTCAATATACTACATTAAAATTTGAACTTGAGAGTGTTATAGATAAAGAAAAAGATAGTCTTCGATTTTATAAATTGGGAAATAATTATAAAAATAAAGTTGAACATATCGGAATAAAACCTTCAATTGATATGGAGGGAACATTAATTGTTTAGTGCGAATGTAAAGTACACATAATTTTCCTAAGGGTTTCGCACCAAATTTTTTACTATTTTTTTCCATTTATTTGCTCATTTACTTAAATGTTCTTTAGTTAACTAAAGAAAATAGCGGTTTTTCTGTATATTTTGGGTCAATTTGGCACAAAATCGCT # Right flank : TATTTAAATCGTTTGTTTTTTGTGTAAATGTCAATGTCGCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTGAAATAATCTCATTGAATCAGTCGAAAATGTCGCACTCTTCATGGGTGCGTGGATTGAAATATTTAAATCGTTTGTTTTTTGTGTAAATGTCAATGTCGCACTCTTCATGGGTGCGTGGATTGAAATCACATACATGATGAAGTTGTGCTAGACGTACCAAAAGTCGCACTCTTCATGGGTGCGTGGATTGAAATGGCCATCCGCGCTGTTTGCATATGCAAGGTGCGGTCGCACTCTTCATGGGTGTGTGGATTGAAATCGTGACGGTCTACCTAAAGACGAAATGGAAATGACTGTCGAACCCTACATAAATTTCACACCAAAGGAACTATAAAATAACACAGGAGATGACAATGATTGTAGCGAAGATAGTAATATAATAAAATATGACTTTTCTGGTGGTGTGGATTGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 23254-23484 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLS01000033.1 Caldibacillus thermoamylovorans strain B4065 NODE_44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 23254 32 100.0 34 ................................ ATTTAAATCGTTTGTTTTTTGTGTAAATGTCAAT 23320 32 100.0 36 ................................ CACATACATGATGAAGTTGTGCTAGACGTACCAAAA 23388 32 100.0 33 ................................ GGCCATCCGCGCTGTTTGCATATGCAAGGTGCG 23453 32 96.9 0 ...................T............ | ========== ====== ====== ====== ================================ ==================================== ================== 4 32 99.2 35 GTCGCACTCTTCATGGGTGCGTGGATTGAAAT # Left flank : AATCATGACTGGCGGCTTCATCTCGTGTCGCACTCTTCATGGGTGCATGGATTGAAATATACCAAACTGCAATAATGTTGCCAATATCGTTGTCGCACTCTTCATGGGTGCGTGGATTGAAATGTCAAGCGGATGCATTGGCAACCGAAAAATTAGAGTCGCACTCTTCATGGGTGCGTGGATTGAAATTTGCCAAAGCGTGTCCTGTGTTGTTGCTTGCGAGTCGCACTCTTCATGGGTGCGTGGATTGAAATAAAAGGATAACTCAATCTACTCCCACCTTCCTGCTGTCGCACTCTTCATGGGTGCGTGGATTGAAATTGTGAACCAATTGAATGGGTGATAACCCATTACGTCGCACTCTTCATGGGTGCGTGGATTGAAATATTTAAATCGTTTGTTTTTTGTGTAAATGTCAATGTCGCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTGAAATAATCTCATTGAATCAGTCGAAAAT # Right flank : TCGTGACGGTCTACCTAAAGACGAAATGGAAATGACTGTCGAACCCTACATAAATTTCACACCAAAGGAACTATAAAATAACACAGGAGATGACAATGATTGTAGCGAAGATAGTAATATAATAAAATATGACTTTTCTGGTGGTGTGGATTGTGAAAAAAATTTTGACATCAAAGAAGGCTGTGTTTGGAGGCTTGTTGTTCTTGCTTATTGGTACATGGGTATTCAGCGAAATGAGCAATCGTTTTTCCATGAAGGGGCAAGAGCCAACTGATGAAGGCTATATTGTTTTTCACAATGGTACGAAATATTTCGTTAAAGGAGAAAATATTACAGCTTCTGACTTGGAAAATTTTTCTGATGAAGATGTTACGATGTTTTCAAAAAAGTTTGAGGAAATAGCGATATTACTGGATGATGGAATGAAACTTTTAGGGACAGGAATTAAAAGTGGTGATCAGGTCGCTATTTGGTATGAAGAAGTCCTTGAATCGTACCCG # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTCATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //