Array 1 1692-270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMSR010000028.1 Lacticaseibacillus paracasei strain 1001095IJ_161003_H4 NODE_28_length_27332_cov_24.4803, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1691 36 100.0 30 .................................... TGTTTTCTCCAGAACAACAGCTTAGACGGC 1625 36 100.0 30 .................................... TGACATTGTGGGTATGCAACAAATCACCCC 1559 36 100.0 30 .................................... GAAACTTGACAAAAACAATCTTATCTACTG 1493 36 100.0 30 .................................... GAATATCATAATGCGGACGACCCATTACCA 1427 36 100.0 30 .................................... AAAAGCCGGTGCAATATGCACCGGCTCACT 1361 36 100.0 30 .................................... GCACTGATGAAACCGCACAACAGTTGACCG 1295 36 100.0 30 .................................... GATCGCGGCACGATTGTAAACGAAGAAACC 1229 36 100.0 30 .................................... CCAAATTGGTTAGCACCGCTTAAAGACGAA 1163 36 100.0 30 .................................... TATCAGAGGCTTATCCATTAAACAACTGGC 1097 36 100.0 30 .................................... AAACTGCCTTCCGTTGCGATCAACTCGCGC 1031 36 100.0 30 .................................... AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG 965 36 100.0 30 .................................... TCGTAGCGGCTAACACGCTTATGGCTGACA 899 36 100.0 30 .................................... AAAATATTTCTAGAATTAGCAACTTTATGG 833 36 100.0 30 .................................... GATCGTTGAAGAAAGGCTGATCAATATGTT 767 36 100.0 30 .................................... CGCAAAAAATGTTTTGACAAGAACACATCG 701 36 100.0 30 .................................... GGCCAATATCATCAGTCGGGAGATTGTCGC 635 36 100.0 30 .................................... ACTCGTCAATATCCTTCTGCATGATCAAGT 569 36 100.0 30 .................................... GCAATCGCGATACTTTCACCGATTGCAACA 503 36 100.0 30 .................................... AACAAAATAATAGGAGGTTTTTACCATGGA 437 36 100.0 30 .................................... ATGACTTTAACAATCAAATCCCAAGTTGTT 371 36 100.0 30 .................................... TATTATCCTAACACATCCATCGAGAAGTTA 305 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG # Right flank : CTGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //