Array 1 31375-31570 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ614144.1 Paenibacillus castaneae strain DSM 19417 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================= ================== 31375 23 100.0 27 ....................... ATTCCCGGACTTTGGTTGCTTTTGAGA 31425 23 91.3 49 ..............T....G... TTATAACGAAGAGTGGCTGAAATGAGCCCATACGCCCAGCCTTGAACCG 31497 23 100.0 28 ....................... TTCCTCAAACGTAAGTTGCTTTTGAAGA 31548 23 91.3 0 ..............T....A... | ========== ====== ====== ====== ======================= ================================================= ================== 4 23 95.7 35 AATAGAGCTAGAAACTAGCTCTA # Left flank : AGCAGGCATTATAGCGCTTAGCACAGCCGCTCTGCTCGGTACGCTAGCGGTGCATTATACCGCCTCAGCCATGGGTGCAGGGTTTGGCGGCTGGGACATGGTGCGGAAGCGGATGAGCGGAAGTGCGGGAGTGGATGCGGAGAAGAATGGGCGCGGGCCCGCTCTAGGCCGGGCAGCAGCAGGCACTTGCTTCGCGCTCGCGGTAATGGCCGCGGCGATTGTAGCAGCCGAGCGAGCGCTTAGCGCAGCGCTCGGCGGTCTGCCGCCGCGGGCGGCGGCGGCTGCGCTTGCGCTGACGTGCGTAGCCGTCGGCGCTTGCGCCTTCGGTGCCGCTGCATTGCGCGGCGGTGCCATTAGCGCGCGCGAATGGCGCGCGCTGCCGGGCGGCGGCTTATTGGCCGCCCGTCTGCGGCGCTGGCGGCTTATTCCGCCGGCGGAGGATAAGAGCTAATTCGCATTATTCGCAGAATGGAGCTCATACGCCACAAGCCTTAAACCAG # Right flank : AAAGCCCAAACTTTGGTAACCTTTAACTTAATATGGCTTGGAATAGCTTTGATTTCGTCAGTTGACTTTGTTAAATTTCGTTAACTTTTCGTTATCTTATTGATGTTTTTGAAGATTTGGTCCATTATTATTTTTTGCGGTAAAATGCAATTGCAGGTGTATGCAAGCTCACGCTCGCTTCAGCCCATTCACTCGACCAGAACTATCCATACATGCATTTCACCCCCAAGGAGGCTTACCTTTCATGGCAATCCCGAACATAACTATCGTTGGGCTTGGCTCCGGTGATCCGGATCAGCTAACGCTGGGAGTATGGCGCAGGCTGCAGGCCGCAGATCGTGTATTCGTCCGCACTGAGCAGCATCCGGCTATGTCCTTATTGCAGGAGAATAGCATTGCCTATACATCCTTTGATTCTCTATACGAGGAGCATGCTTCGTTTCCGGATGTGTACGAAGCTATCGTGGGAGCTTTAATAACAGAAGCCCTCAGCTTAGGTG # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.10, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATAGAGCTAGAAACTAGCTCTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 332958-333156 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ614144.1 Paenibacillus castaneae strain DSM 19417 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================ ================== 332958 24 100.0 27 ........................ TACAATAAATAAGCTTGCTTTTAGCGA 333009 24 95.8 48 ..............T......... ATCCAGGAAAACTAACTGATATGAGCTCGTCTAAAGTTAGATGAACGA 333081 24 100.0 28 ........................ ACCACAAAATTCAGCTTCCTTTTGGAGA 333133 24 95.8 0 ..........A............. | ========== ====== ====== ====== ======================== ================================================ ================== 4 24 97.9 35 AATAGAGCTAGAAACTAGCTCTAT # Left flank : GAGCGCAACAGAGTTTGCACCTGAACGGAAGCTGACACGTGCGGAGTTTACTGCGATGTTGGTCAGATCGCTTAAACTTACAGATAAAGCGAGCGTATCCTACGTGGATGTGAAGACAAGTGATTGGTATGCTGAAGCCATCTCGATCGGTGTGAAGGCGGGTATTGTCAAAGGCAAGAGTACCTCCATCTTTGCGCCAAATGCAAACATTACCCGTGAGGAAATGGTTGTTATGATGATGAGAGCCTATCAGATTAGGAATGAAGCATATTCAACACTAGAAGCTAATGATACATTTACAGATGCAAAAAGAGTTTCGGCCTGGGCGATTGAGCAAGTAGATGCAGCCGCAGGATTAGGCCTCATTCAAGGACGTCCGAACGGTGCGTTCGATCCTCAAGGCATTACAACTAGAGCAGAAGCGGCAAAAGTGATTTATAATTTGCTTAATCATTAAGCGATGTTTACCTCCTTCACGCTGTTTTGATAACTAATGGTGT # Right flank : TCTCCAAGTGCGAGCTCATACGAAGAATGCCTTATAGAAAGGGCTGTCCAAAAAGTCATAAACCTTGAGGGTAACCTCGGGTTTGTCACCTTTTGAGACAGCCTTTTTTAGTGTTTCACAGCAGAAGTTGCCGGAATACTCGGATAATATTGGATATGTTGCGGATAATAACAGTGCTGCAAGGTGATTCGCTAGGGGGAATAAGGATGGCTGTGAAAAACCACTATAACGTGCTTGGTGTCACTAAAGGAGCATCTCAGCAGGAGATAAAGAAGGCTTATCAGAAGCTTGCCAAGAAGTGGCATCCCGATGTGAATAAATCGCCCGAGGCGGAAGCGAAATTTAAAGAGATGGCAGAGGCATATGATGTGTTGAGCCATGACGATAAACGAGAGGCTTATGAGGAGGAAGCGCGTTACGACTCGATGCGTCGAAATTCCTCAAGGCAAAGGCAATCTCCAAATGGGCAACAGTCGTTTAGGCGCAGCTCAAGCAGAAGC # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATAGAGCTAGAAACTAGCTCTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.50,-4.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //