Array 1 88626-87928 **** Predicted by CRISPRDetect 2.4 *** >NZ_WENK01000007.1 Pediococcus pentosaceus strain FAM19083 FAM19083_scf0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 88625 36 97.2 30 ...........G........................ TATCGTCTGAGTGATCATCTTGTAATTTAA 88559 36 97.2 30 ...........G........................ ACCTAGAAGGCGAATTAGCAAACATTCAAG 88493 36 97.2 30 ...........G........................ GTGGTGACACACCGGTAACAAAGAAGTTCA 88427 36 100.0 30 .................................... TGCTACATTCTATGGCCAAGATGTGTCGTT 88361 36 100.0 30 .................................... TAAATTTCGCCATTAAGCTTCCTCCAGTTC 88295 36 97.2 30 ...........................C........ TTCTGCCGGCGGAATCCACTAAATTTGTTT 88229 36 100.0 30 .................................... TTATTAAAAAGTGCCTTATCTCCTGTCACT 88163 36 100.0 30 .................................... TTTGACCCAGTCGTTGCTTGAACCATCTGA 88097 36 97.2 30 ............C....................... CGCGCGCCGTTATATCTGAATTTTCTATCA 88031 36 100.0 30 .................................... TTAAAAACTAAAACGTCTAATGATAATCTG 87965 36 91.7 0 ...........G.................A..A... | T,C [87930,87937] ========== ====== ====== ====== ==================================== ============================== ================== 11 36 98.0 30 GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGCCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : AAACTGTACCTCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAATTAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGACCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGGCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATGTGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCTAGTGTGGAATTAGCTCCAAACATCGCACTGAGATTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATAATC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAATGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //