Array 1 11240-5990 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKG01000024.1 Vibrio navarrensis strain VN-0507 NODE_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11239 28 100.0 32 ............................ TTTACTCACAGGGTGAAAACGTGAAGGGGCAG 11179 28 100.0 32 ............................ TGGCGCGCAAAAGTATCGTTTCAAAGTTGAGC 11119 28 100.0 32 ............................ TTATTTTAATACGACAGTTATTGACACAAGTC 11059 28 100.0 32 ............................ CATAATTCGCGCATGGGCCGCATCACCGTAGC 10999 28 100.0 32 ............................ ATAAAACCAGCCAGCGAACGAACAAGCGACAG 10939 28 100.0 32 ............................ TGAAAATCGTTGTGAAGTAGCTAAACAACGTG 10879 28 100.0 32 ............................ TTGCTAAATGATGTTTATATTGACGGTTCATC 10819 28 100.0 32 ............................ ATGCAATCATTGACACCATAAACCGCAAGACC 10759 28 100.0 32 ............................ TGAGCATACTCAATTTGTTGTCGAGGCATTCC 10699 28 100.0 32 ............................ TGTTAATACTTACGCCTCTGCGGCTCATCATC 10639 28 100.0 32 ............................ TTTTGCTATCACGCCTTGTCGTTCTAACGCCG 10579 28 100.0 32 ............................ TCATGAATAAAATGCAACCCGTTCAGTATGGC 10519 28 100.0 32 ............................ AAAAAACGAATCGTAATCGCGCCGCTTGGCGA 10459 28 100.0 32 ............................ ATGAGAAAGGAATAATCAAACCATGCCAAAGG 10399 28 100.0 32 ............................ TTAGTGCGCATTATGTGGTTCAGCATTATGTT 10339 28 100.0 32 ............................ CATCGACCAAAAGGCAGCATGTGTGCGAACTG 10279 28 100.0 32 ............................ TTTACTTCGAGAGATGGTTTTATCATTAATAT 10219 28 100.0 32 ............................ TGCAAAGATTGATGATCGAGCCGATTGCTTGT 10159 28 100.0 33 ............................ CTGATGTAATCATTTGATAGCTCCTACGCTACG 10098 28 100.0 32 ............................ TGGAGGCATTAATGACCAGTTGGAAGATGCAG 10038 28 100.0 32 ............................ TTTCACTCTCAATAATGCCATCGATAACTGCT 9978 28 100.0 32 ............................ TGGAGGCATTAATGACCAGTTGGAAGATGCAG 9918 28 100.0 32 ............................ TTTCACTCTCAATAATGCCATCGATAACTGCT 9858 28 100.0 32 ............................ TGCAAAGATTGATGATCGAGCCGATTGCTTGT 9798 28 100.0 32 ............................ TATTACGCGATTTTGGTGTGGGGCATTGGCCC 9738 28 100.0 32 ............................ GTTACCTTGCACCGCAAACATCACATCACCGC 9678 28 100.0 32 ............................ AGACCGAGCCGTGGTACTCACTGGAGGCATTG 9618 28 100.0 32 ............................ AAAATCAATCACATAGCGGCCCGGCTCTGTGT 9558 28 100.0 32 ............................ TGCAGCACCGCACTTGGTAATAAACAGTTCGA 9498 28 100.0 32 ............................ TGTGGGTCGATATCAATGACCAGAACTCGATA 9438 28 100.0 32 ............................ TGTTGATGATGTTGTGGCATTGATGCAGAGGG 9378 28 100.0 32 ............................ TGACGCGATACACCTACATAGGCTGCTGCTGC 9318 28 100.0 32 ............................ TATGACCAGTTCAGGGTCTGCGAAGACAGTAT 9258 28 100.0 32 ............................ CGACTAATTCAACATCCATCGTTAGACTGATT 9198 28 100.0 32 ............................ TGACATTCGAAAAGAATGCAGAAAAGCGGGTG 9138 28 100.0 32 ............................ TCATTGCGTGCTAACAAGCTACCGAGGCGAAA 9078 28 100.0 32 ............................ TCGAATCTGGCTTGGATGGAAAGATTCTAATC 9018 28 100.0 32 ............................ TCATCGATAAGCACATGAAAACATCGGCCATT 8958 28 100.0 32 ............................ ATCCTCCATAAGAAAAAAGCTTTTGATTTTTT 8898 28 100.0 32 ............................ TGACCGCCGAAGTTGACGATAACTCAGCGGCG 8838 28 100.0 32 ............................ TGTAAACTCTGGGCTAAGCGGCAGTGTAATGA 8778 28 100.0 32 ............................ TTTAGGGCGTAAACCCTGCCGTGATTTCTCTT 8718 28 100.0 32 ............................ GCTCACTAAAACACAGAAGAAATAACTCTGGA 8658 28 100.0 32 ............................ TTAAAAACGCTGAAGAAAGAGGACCGAGCCGA 8598 28 100.0 32 ............................ TGATTGAAGATACTTTGGTGCATGTGGGTGTC 8538 28 100.0 32 ............................ ACGATGAGCGCGTATTGGTCTGCGATGTGCAC 8478 28 100.0 32 ............................ TATCTGCTGGTTTTCCTTCTGCGGTTGTCATT 8418 28 100.0 32 ............................ GTTTCGGAGAATCTAGAAACTGAATGTGCTAA 8358 28 100.0 32 ............................ AGCAAACAGAGGACTTGTTCAAGTGGTATGCT 8298 28 100.0 32 ............................ GTCATTTTACCTATTTCAACGTTTTTGCGCTG 8238 28 100.0 32 ............................ ACATTGACAAACCCGCTTTGGCCAACAGCATT 8178 28 100.0 32 ............................ TCAGAGAGCAAGAGGCTGCGCTCAGAGAGCAG 8118 28 100.0 32 ............................ CTGTTATGCCGTGGATTGATCCATACAAAGAG 8058 28 100.0 33 ............................ TATTGATGGAAGCAAGAGAGCTGGCGTTCTTCA 7997 28 100.0 32 ............................ TTTAGGCGCTGGTTGGTATCGCATCACAGCGA 7937 28 100.0 32 ............................ TCCATCCAAATTCGACTTTTTTCACCCGTGCC 7877 28 100.0 32 ............................ AGGAGAGTTAAACCATGAAAATTAAAGCAGAA 7817 28 100.0 32 ............................ TAATGGAGCAATCCGCAAAGAGCCTAAGTCAA 7757 28 100.0 32 ............................ TGAACAGCGACTCAGGCAGTTACCTTGCCAGC 7697 28 100.0 32 ............................ TTTTTGGCCAGCGCTATGTGATCGGCAAATTC 7637 28 100.0 31 ............................ TCGATGTCTTCCCACATTTCTTTGGTGATTG 7578 28 100.0 32 ............................ TGTTTCACCCCACACCAAGCCCATTCCTGGCG 7518 28 100.0 32 ............................ AGTAACCGCAAAAGCAAAGTTGAACTGCTGCC 7458 28 100.0 32 ............................ TGATCCATAGCCACCAAGAAAAGCTCACCAGT 7398 28 100.0 32 ............................ TAATGTTCATTTCTTTAGTCTCTATACAAACA 7338 28 100.0 32 ............................ TGACGTACCTAGCGGCCCTGACGCGTCAACAG 7278 28 100.0 32 ............................ TAGGGGCTGCATAATGGCGGGTGTTCGCTACT 7218 28 100.0 33 ............................ AAATGGAACTCTTCGATGCGGTGGAAGAAGCCT 7157 28 100.0 32 ............................ TATCTTAAAGGATCAATACGACATCATTTTCT 7097 28 100.0 32 ............................ GTCTTCGTAAGCATCACGCTTCAACTCATCGA 7037 28 100.0 32 ............................ TTTCAAGCGGCTTGGCCGTGCCGTTCGCTGGT 6977 28 100.0 32 ............................ TCAACCGAAACGTAAACACTTGCCGCGGCGGA 6917 28 100.0 32 ............................ ACAGTCAAAACTAAGAAGTGAATGAAGTTCGG 6857 28 100.0 32 ............................ TCTTGCGCATTAGCAAATGCTTGGGAGGTGGT 6797 28 100.0 32 ............................ TTGGCGAACAAGCGCAATTTGAGAAAGCCTGT 6737 28 100.0 32 ............................ TCCATCCAAATTCGACTTTTTTCACCCGTGCC 6677 28 100.0 32 ............................ ATCAACCAATCTCAGAGCTAGTTGATGCCATA 6617 28 100.0 32 ............................ TCTAAAATTGAACGTGTTTATGAATTGTTCTG 6557 28 100.0 32 ............................ GCTCGTGCAAAAACAGAGTTACAAGCAAAGCA 6497 28 100.0 32 ............................ TTATCCATCGCTAAACCGACCAGAGCCTTTTC 6437 28 100.0 32 ............................ TCAGTTATCATTTGGGGGCTTACACCCAAATC 6377 28 100.0 32 ............................ TTTTAGTATGATACTTTATTTTTGAACGTTGA 6317 28 100.0 32 ............................ ACAAAGTAAGAACCCTCCTTCATGACATGTAT 6257 28 100.0 32 ............................ TTCTTCTTACACTGGCATTGCTTTTAAGTTTT 6197 28 100.0 32 ............................ CGAATCCAGACCCCGACCCTAACCCTGACCCT 6137 28 100.0 32 ............................ TCGTTACCGGCGAACCCTGCACAAATACCGTT 6077 28 96.4 32 .............T.............. TATTCTTCGCGCATCCCACGCGCCAGCATAAG 6017 28 96.4 0 .......................G.... | ========== ====== ====== ====== ============================ ================================= ================== 88 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GAGCGCATTGCATGATTTGCAGGGGTTAAATTGGTTAGGACCTTTGGCAGGATATTGCAAGATTACTACGGTTACTCATGTGCCAGACCAAGTGGAATATCGCATCATTTCAGTTAAACGCAGTAATTTAAGCAAAGCAAAATTAGCGCGTTTAATTGCTAGAGGTAGCATAGATAAAGATGGTGAGAAACGTTACAAAGTAAAAATGCTTCGCCAAGGGTTTGATAATCCATACCTTGATCTGTCTAGCAGTTCAACAGGGCAGGTGTACCGAAAATTCTTTGAGTTTAGTGATATTCAATCTGAGCCAGTTGATGGTGAGTTTGATAGTTATGGTCTAAGCAAAACAGCAACTGTACCTTGGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTTAAAACAAATGGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCCCCCGTACCCCAAGCCGTACCCAGAGCGATTTTTGCTACAATTAAAAACCGTTTAAACCTTTATTTAATGCGCTCTAACATCACACCCGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGAGCGAAACGGGTAATGGTGTGGGTTTCGCTCAGAATTTCGAGGTTCTCGAGCAGGGTATCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCTACATCCATACCTGCGCGCGGAGGATCGACAAAAATCGTATTGCAGTTGTAGCTCTTCAAATCTACGCCCGCATCTTTAAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGCACGTTCTCAATTTTGTTGGCGGCAATGTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //