Array 1 25118-25748 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEXI01000005.1 Lactobacillus paragasseri strain JCM 5344 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25118 36 100.0 30 .................................... GAAGATGCTTGGATAATGGAGGATATATTA 25184 36 100.0 30 .................................... TTATCCGGCCATACTGTTTTGACCTTTTGG 25250 36 100.0 30 .................................... CAAAAAGTCATGGTATCAACGTTAAACGTT 25316 36 100.0 30 .................................... TATCTTTATAAATATTTGTATCAAACGCAT 25382 36 100.0 30 .................................... GGTTGGAAAGCACTATTCCAAGATAAAGCA 25448 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 25514 36 100.0 30 .................................... TATCGTCGGTACGAGTTGTAATGCTGAATA 25580 36 100.0 30 .................................... TTTGCATAATTAATGAAATCAGCGACAACA 25646 36 97.2 30 ............................T....... AGTTAATCAAAGAAGGCGGACAAAAAGGCG 25712 35 91.7 0 ..........................A.A....-.. | TT [25740] ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.9 30 GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG # Right flank : CGTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //