Array 1 25118-25748 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BEXI01000005.1 Lactobacillus paragasseri strain JCM 5344 sequence05, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     25118	    36	 100.0	    30	....................................	GAAGATGCTTGGATAATGGAGGATATATTA	
     25184	    36	 100.0	    30	....................................	TTATCCGGCCATACTGTTTTGACCTTTTGG	
     25250	    36	 100.0	    30	....................................	CAAAAAGTCATGGTATCAACGTTAAACGTT	
     25316	    36	 100.0	    30	....................................	TATCTTTATAAATATTTGTATCAAACGCAT	
     25382	    36	 100.0	    30	....................................	GGTTGGAAAGCACTATTCCAAGATAAAGCA	
     25448	    36	 100.0	    30	....................................	TATCGCATTATTCATCGTATCCATACCCGT	
     25514	    36	 100.0	    30	....................................	TATCGTCGGTACGAGTTGTAATGCTGAATA	
     25580	    36	 100.0	    30	....................................	TTTGCATAATTAATGAAATCAGCGACAACA	
     25646	    36	  97.2	    30	............................T.......	AGTTAATCAAAGAAGGCGGACAAAAAGGCG	
     25712	    35	  91.7	     0	..........................A.A....-..	|                             	TT [25740]
==========	======	======	======	====================================	==============================	==================
        10	    36	  98.9	    30	GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC	                              	       

# Left flank :   AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG
# Right flank :  CGTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.90,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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