Array 1 39483-39315 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEPB01000009.1 Enterococcus durans strain 4EA1 aekdT-supercont1.4.C9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 39482 36 100.0 30 .................................... AAATTTAACTATCAACGCACTCGCAGTTCA 39416 36 100.0 30 .................................... AATAATAAACATGGATATTATCGAATTTTG 39350 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GAGCGGATTTTTTTGGGAGTTTCTG # Right flank : AGAGCTAGGATTGATTGCTACAGTGGGTGTGTTTTAGAGCTATGTTATTTGAATGTCTAGAGGATGAAGAATAAATGACCGAGGGGTTGTTTATTCTTTTTTTCATATAATTGGACGGCGATGCTTTCTGTTAGTAACATAAAGGAGAAGGGTGGTTGGGGATATGTTTGATTCAACGTTGATGGTTTGCTTGGATTGGCTGATGACGATTTTAAATCTTGCTTCGATCATTATTTTAGTGGTCGGTGTTTTTTTAGTATTAAAAACGTTGTTTGATTGGCGGACTTTGAAGAAAGATTATGGACAGCGAAATAGTCGCAATGCAGAGATTCGCAAATTGTTGGCTAGTTATATTTTATTAAGTTTAGAAGTTTTAGTGGTGGCAGATATCATTGAATCTGTCATCAAACCAACTTGGACAGATATTTTAAAACTTGCTTTGATTATTTTGATCCGTACGATCATTTCGTATTTCTTGAATTTAGAGATTGAAGAACAAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 175-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEPB01000010.1 Enterococcus durans strain 4EA1 aekdT-supercont1.4.C10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 174 36 100.0 30 .................................... ACTTAACCAATCAAAACAGTACTCTTTCAC 108 36 100.0 30 .................................... TTTAAATGATTTAAATGAGGGTTTTGGCAT 42 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GTTGAAGTAAAATCAATGATCGACAAATTGACCACTACGATCAGCGAATTGATCGACTACGAGCTATTGGATCATGAATTGGATTTGGAAAGTGATGAAATCACGGTATTAGAGCTGTTTAAAGCACTTGGTGTAAAAATTGAAACGCACAGTGATACCATCTTTGAGAAAATGTTGGAGATATTGCAAGTATACAAATATCTCTCTAAAAAGAAATTACTAGTTTTCGTCAATACATGCGCTTATTTTACGTTAAAGGAGCTATTGGAGATACAAAATTACATCTCTTTGTACAACATGGATGTTTTATTTCTTGAACCACGTAAAATTGAGGGAGTCCCTCAAAGAGTTTTAGATAAAGACTATTTTTTGACATAAAAACTATGCTAAAATGAACTTAAGAACGAATGACTTGAAGCAGTCATTCAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGTTCGGTGATAAATCACGTAGAAAAAATTTTCTGCGAG # Right flank : CCATAAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 584723-585220 **** Predicted by CRISPRDetect 2.4 *** >NZ_LEPB01000004.1 Enterococcus durans strain 4EA1 aekdT-supercont1.1.C4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 584723 36 100.0 30 .................................... ATGGTGCGACTGCGACTAATTGGGAAGAGT 584789 36 100.0 30 .................................... TGTTGCCATTTTTTTATCGTCCTTTCGACT 584855 36 100.0 30 .................................... AATAGCAAAAGTTAATCTAAATGGTTTGTA 584921 36 100.0 30 .................................... TTCGCCATCAGCACGAATTCCTTCGAGTGG 584987 36 100.0 30 .................................... TGGGCTCGTCTTCTATGCAGATGATTGCAT 585053 36 100.0 30 .................................... AAGGAGTTTTATAAATCGTGAACAAAAAAA 585119 36 100.0 30 .................................... AAGGAGTTTTATAAATCGTGAACAAAAAAA 585185 36 91.7 0 ..........................T......GT. | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : AGAAGTAAAGCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTGATCGAAGATCTGATTTCAACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCCGCTAAACGTGAAGGGGCGAATGTCTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTACTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCAGTGCTGATCGAAGCAGCACTAGAAGAAAAATACATTGATGAAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAACATCTGTAAAAAATATTTTAGCATCAGAAATAAAATGGTATACTAGTGTTGAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCAGTGATAAATCACGTAGAAAAAATTTTTCTACGAG # Right flank : CTGCAACTGTTTTTGAGTAGTGTTATTTGAAAATACGATATACGAGTGGTAGAGACTAGAATGCTTTCTTCTGGTTTCTATTTTTTTATATAAATCGGGAATGATTTTGTTAAAATTATAAAAAAATCAATGAAAATAAAACGTGTTATTTGCAAATTTTAGTTATTTAATGGTAGGATTATCGGAAAAAGTATTCCATTAAGGGAGGTCTATTTATGGGATTGAATGAATTTATTTTAGGATTGAACAACTTAGAAAAAATCACTCGGGCTCCTGGTTTCTTTAAATTCACCGAGCATACGGTAGCGGCACACTCGTATCGAGTGGCTTCGATTGCTCAAGTTTTAGGGGATATCGAAGAAGTAAATGGTCAAAAGATCGACTGGAAACTGCTCTATGAAAAGGCACTGAACCATGATTATACCGAGCGCTTCATTGGTGACATCAAAACTCCAGTAAAATATGCAAGTAAAGAGTTGCGGGGGATGTTGCAAACGGTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //