Array 1 469789-469382 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022657.1 Tumebacillus algifaecis strain THMBR28 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 469788 37 91.9 37 ...............C......A......A....... CCCGTTCTGCCATGATGAGGAAAAGTTCTGTTGCTTT 469714 37 100.0 37 ..................................... GCGGAAATGTATAACCAATCCATGACAACGGCGTCCT 469640 37 97.3 37 .............................A....... CCCGTTCTGCCATGATGAGGAAAAGTTCTGTTGCTTT 469566 37 100.0 37 ..................................... CCGTGCGATCCGCGTCAGTGGCGCTGCACGATGGTCT 469492 37 100.0 37 ..................................... TGTAGTATTATTATCTCAAGAAGACAAATAAGCTAAA 469418 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 98.2 37 CTTTCAGTCCCCTATATAACGGGTCTGCCGTTGTTAC # Left flank : TCCAAAACCTATACCTCTTCTTGTCAAAGTCAATTCCCCTTATAAAAAACCTATATTTTCCAAGATGGGTTTTTTGTCATTCCAGCAGGTCATTGTACCCACTGAACAAAAGACACTCCGATGGGTTTACTTGCCCAGTCTGAGCAATTGCAGATGGATCGATGGAAAGTGTGACTGATGCAAGAGTGGCTTCAGGGACAGGTGGTGTCAATCCATTTTTTGAGCGAATTCTTCAAGTTGATTGGACGGAAATTGAGTGACCCGTTTGGTTGATTTCTTGGTATTCATCGAAGAGACTGAATTCTGAGAAGTGCGATCCGAAGCATCAACACTTGTTCCTGCATCACCCGCAACAACCAAAGCAGCAGCTAACGAGAGAATTAGAACTGTTTTTTTCAAGACAATAACCTCAAAGAATAATTCCATAGCGGTACAATATAGGGAATTCACCATAAAAAGGAATTTTCCTGCGTCAACATTAAAATGAGGTTATTCGCTTC # Right flank : CGACCGAATCAGTCATAGAAAAAGCGAGGCGTTGCAAGGCTTCACGCGCTCTTTGATTCGGGCTCAGTCCTGCTTTTTTTCGAGGATCGACTTTTTGTTTCAAAACAGGGGGGTATCCTCGAAAAGTTACTTTGTTGCTTTTATTGTTTCCCTTATTAGTATAAGGTATTCTTTCCTTGGATAAAATAGCTAAGTTTATCTTGTAACAGAATCACGAGACATTCGGACGACGTTTCAAAACAATCAGGAAAGCAGGATTTTTTAGAGGAGCTACATCTAACAAAAATTTTATCATTACGCCGGATCGGTATGTTCTCAACAAAAAGACGACCAACTAAGGTCGCCGTAGATAATCCCTATCCATCCAAACCTTCCAGATGCAACTTCGCCTCTTTTTCCGTCTCCGCTTCGAACTCGTACCCGCACCACATCCAAATTCCTTGCCGCGTCTTGCTCTTGTACAAATACCCCATTTTCCGTTTACACCGACCATTGCGCCT # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGTCCCCTATATAACGGGTCTGCCGTTGTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 1199104-1199363 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022657.1 Tumebacillus algifaecis strain THMBR28 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1199104 37 100.0 37 ..................................... ACCTGTACCACGAACATTGTTGTACATTATGAGTACC 1199178 37 100.0 38 ..................................... CTCTGGTTCGCGTTCAGTGCTTGATTCATCATTCCGAC 1199253 37 100.0 37 ..................................... TTTGCGAAGCCTGTCCATCCGTGCTCCGCATTGAGGA 1199327 36 91.9 0 ...................-...A............C | G [1199350] ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 98.0 38 GTAACAATGGCAGACCCGATGTATAGGGGACTGAAAG # Left flank : GGTTCCCCGTGTTGACCGCACAAGATGGCGATTATTTGAAAAATGGTGAACTGTATCTCAAACACAGTTTTGACGGTACCGAACTTGATGTCAAATACCTCGAAAAGACGCTTCCCCACGTCTACAATCTCTGGGGACGGACGATTCATTTGGAAACCGTTCTCGACGGTCGGGCTGTGATCTTCACCCACGACGGAAAGAAAAATCACCGCAGGTTTCAATGAAGTGCGGTTGTGGAAATACAGCAAAGGACGCTCTGCCTGCGGGCAGGGCGTCCTTTGCTTTCAGGGGGAAAGCAAATTCAAAACTACTATTCTCTCCGCAGCTTGCATCAGTTATACTGGAATTGGAAATACTTAATGGAGCAGAAACTGATTTTCGAGGATCTCCCCGCTTTTTGATGCAAAAAGTCGATCCTCGAAAAAATGGCCAATGCAGACGGGACAAAGCGTCTCGTCAAGCCGCGCCACGACTGAGTTTACTCATGCCGACCGAGGTCG # Right flank : CTTCTGGATGTTGGACGTATACGGGTAATACTTGTAGCTATTTTTTTATTTGTAGTTCCCTACTTCTTGCTGCACCACCCAAATCAAAAACTGGAGGATATGAAATGCTCGATGCCTTACGAATTTCAAAATATCGATTCACCCTCGAAGCGGGAGCGAATGGGCTGGAACTTCCGCCATTTAAGACGTCTGCCTTTCGTGGTGGATTTGGACGTGTGTTTAAGGCGCTGACTTGCGCTTTTCCGGGGAAAGAGTGTACGGATTGCTCAATTCAGCATTCGTGTCCGTACATCTATGTATTTGAAACTAAACCACCAGTAAACTCTAAAGTTGCTCCCAAATTTGAAAGTGTTCCGCGACCGTATGTGATCTCCAGCGAGTTTGACGGAAAGCGCTTTTTTAAACCGGGGGAAAAACTGAGTTTTGAGCTATCCATCTTTGGCGATGCTTTTGATTATGTGCCATTTTTTATTCGTGCCTTTGAAATGCTGGGCTCAAAA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAATGGCAGACCCGATGTATAGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 3967473-3967140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022657.1 Tumebacillus algifaecis strain THMBR28 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 3967472 35 80.0 39 ...C.....A........TAA.T.......T.... AGATCTCGATTAACACAGCGTCCATATTTGTTTCACGTA 3967398 35 100.0 38 ................................... ATCATGAAAATGTACCGCAGTATTAATAATTGCTGGTC 3967325 35 94.3 41 .........A..A...................... AGTACATTGTGGACTCCATGGATGCTCAGATCGCTAAGGTT 3967249 35 88.6 40 ...C..............T.AT............. AGCCGAGCACGAACAGCCCGAAGTCCGCTCCGACAAAGAG 3967174 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================= ================== 5 35 92.6 40 GTAACAATGGCAGACCCGATGGATAGGGGACTGAA # Left flank : GAAAGGTATTGCTTGCAACTTTTGTAAGTTGATGGTATCCATAAGATGAGGTGAGGAGATGAATTGGAAGGAATTTTACATCGCGCTTGCTGGCGGGCTCGCATTTGGCGTAGCTTGGACGGTATCGCATTACTGGTTTACCGGTGAGCTTACGTACTCCGGCATCGGGGCTACCATAACCTGGATCATCGTCAGGATGATCCTGTCAACTGGCAAAAGAAAAAAGGACCAGCGCAGGTAGAGGTAGATCGTTATACGCTATTTTCGACTTCTGCCAGCCGTGCCGTGGGATGATGGAGAGAAAAACTTAGATATTCTTCCCAAGGATCGAATGCGGTATACTGTGAGTGGGAATCATAGCATCAAGAAGTGACCTTTTCGAGGATTCCCCCCTGTTTTCGTGCAAAAAGTCGATCCTCGAAAAAAAGCCGAAGCCAGTCGGTATCAGAAATGGCGGGAAGGCTTGCCACGCCTCGGCTTTTCGATGGCCGATTCGGTCG # Right flank : TGGTGAAGGACGGGTGTCGTCGGCTTCTCACGTTTGTAGGCTTGGTCTAACGTTCGTAGGACAAGGCCTTTTGTCATACGTTCATCAGCCTAGAACCCCACGATTTTTCGCGTGCACAAGTCACATGATGCTGGCCACATACAGCCAACCTTCGTTGGTCGGGACGTAGGTGATGTCAGCCATCCAGACCTGATTCGGAGCATCGGTCGTAAATTGTTAGTTCAACTCACGGAACACTTAAACCGCCCCGATTTTCCCAACTTCCTTCCCTATGTAGATTTGGATTCCGTTTTTTAATTAGGCATTCTCCATTTTGTAGTACTCAAGTTCTTCTTCAATGGAGTTAAAGTGATCTGGCCGCGCAGGAGGTCGAAGACGTTCGCGCAACTGCACGGTAACTCATCCCCTCTTCCAACACAAGTTGGGCAGCCTCCAACTTGCTTGATCTCGATACTGTAACGATTATTCTTTGTTCCAATTTTTTACATGAAATCCCCTCG # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAATGGCAGACCCGATGGATAGGGGACTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //